Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 2.2e-33 145.6 106 100.0
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.1e-19 98.6 111 63.1
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 4.4e-18 94.7 87 62.1
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 3.7e-17 91.7 87 64.4
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 1.9e-16 89.4 109 60.6
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 1.0e-14 83.6 70 81.4
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.0e-14 83.6 84 77.4
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.3e-14 83.2 91 62.6
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.7e-14 82.8 84 61.9
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 2.3e-14 82.4 109 52.3
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 2.3e-14 82.4 144 50.7
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 6.6e-14 80.9 96 72.9
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 8.6e-14 80.5 143 53.8
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 1.5e-13 79.7 85 67.1
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 5.6e-13 77.8 67 64.2
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 7.3e-13 77.4 66 68.2
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 7.3e-13 77.4 86 51.2
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 9.5e-13 77.0 112 55.4
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.1e-12 75.9 111 54.1
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 2.8e-12 75.5 84 77.4
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 2.8e-12 75.5 84 77.4
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 2.8e-12 75.5 61 65.6
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.8e-12 75.5 97 71.1
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.6e-12 75.1 68 76.5
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.7e-12 74.7 67 64.2
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 4.7e-12 74.7 88 54.5
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 6.2e-12 74.3 68 61.8
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 6.2e-12 74.3 85 78.8
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.1e-11 73.6 83 62.7
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.1e-11 73.6 75 65.3
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 1.4e-11 73.2 93 60.2
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.4e-11 73.2 119 54.6
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.8e-11 72.8 55 67.3
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.8e-11 72.8 66 60.6
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.8e-11 72.8 66 60.6
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 1.8e-11 72.8 108 60.2
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 2.3e-11 72.4 84 73.8
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.1e-11 72.0 141 48.2
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.1e-11 72.0 59 64.4
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 3.1e-11 72.0 59 64.4
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 4.0e-11 71.6 95 54.7
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 6.8e-11 70.9 84 60.7
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.8e-11 70.9 90 58.9
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.8e-11 70.9 70 57.1
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.8e-11 70.9 72 61.1
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 8.9e-11 70.5 72 72.2
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 8.9e-11 70.5 45 75.6
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 1.2e-10 70.1 64 87.5
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.5e-10 69.7 57 64.9
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.5e-10 69.7 138 45.7
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.5e-10 69.7 138 45.7
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.6e-10 68.9 66 62.1
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 2.6e-10 68.9 73 64.4
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 3.4e-10 68.6 64 59.4
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.4e-10 68.6 45 71.1
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 5.8e-10 67.8 88 58.0
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 5.8e-10 67.8 71 56.3
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 5.8e-10 67.8 71 54.9
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 7.6e-10 67.4 97 73.2
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 7.6e-10 67.4 67 70.1
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 9.9e-10 67.0 112 61.6
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.9e-10 67.0 66 57.6
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 1.3e-09 66.6 61 54.1
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 1.3e-09 66.6 86 61.6
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.3e-09 66.6 101 40.6
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.7e-09 66.2 49 67.3
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 2.2e-09 65.9 127 55.9
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.9e-09 65.5 46 67.4
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.9e-09 65.5 46 67.4
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.8e-09 65.1 118 58.5
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 8.4e-09 63.9 61 54.1
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.4e-09 63.9 61 62.3
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 8.4e-09 63.9 34 85.3
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 8.4e-09 63.9 63 71.4
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 8.4e-09 63.9 49 65.3
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.1e-08 63.5 54 57.4
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-08 63.2 84 65.5
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-08 63.2 69 52.2
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.9e-08 62.8 90 64.4
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.4e-08 62.4 72 55.6
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.4e-08 62.4 87 48.3
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 3.2e-08 62.0 104 40.4
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 3.2e-08 62.0 85 67.1
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 3.2e-08 62.0 70 52.9
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.1e-08 61.6 61 52.5
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.1e-08 61.6 61 52.5
Eucgr.E02061 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.1e-08 61.6 61 86.9
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 5.4e-08 61.2 110 58.2
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.1e-08 60.8 46 60.9
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 7.1e-08 60.8 72 52.8
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 9.2e-08 60.5 87 58.6
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.2e-07 60.1 49 73.5
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.6e-07 59.7 46 63.0
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 2.1e-07 59.3 87 55.2
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 2.7e-07 58.9 47 59.6
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 3.5e-07 58.5 48 60.4
ATR0820G076 Amborella trichopoda HOM05D002879 ORTHO05D002930 3.5e-07 58.5 94 62.8
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 3.5e-07 58.5 93 53.8
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.5e-07 58.5 91 45.1
MSTRG.25309 Avicennia marina HOM05D002879 ORTHO05D002930 4.6e-07 58.2 66 71.2
MD10G1029100 Malus domestica HOM05D002879 ORTHO05D002930 6.0e-07 57.8 60 90.0
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.0e-07 57.8 83 47.0
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.0e-07 57.8 83 47.0
TAR381G1351 Trochodendron aralioides HOM05D002879 ORTHO05D002930 6.0e-07 57.8 116 54.3
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.0e-07 57.8 45 64.4
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.8e-07 57.4 43 62.8
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.0e-06 57.0 86 55.8
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.0e-06 57.0 84 58.3
Actinidia04758 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.3e-06 56.6 65 60.0
Actinidia29537 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.3e-06 56.6 65 61.5
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.3e-06 56.6 87 66.7
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-06 56.6 61 52.5
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-06 56.6 61 59.0
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-06 56.6 61 59.0
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.3e-06 56.6 61 57.4
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.7e-06 56.2 87 55.2
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 1.7e-06 56.2 87 55.2
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 1.7e-06 56.2 75 64.0
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-06 56.2 51 56.9
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-06 56.2 49 57.1
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 2.3e-06 55.8 105 35.2
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 3.9e-06 55.1 46 71.7
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 3.9e-06 55.1 68 63.2
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.9e-06 55.1 61 57.4
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.9e-06 55.1 85 63.5
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 3.9e-06 55.1 46 71.7
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 5.1e-06 54.7 60 55.0
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 5.1e-06 54.7 60 55.0
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 5.1e-06 54.7 60 55.0
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 6.6e-06 54.3 57 70.2
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.6e-06 54.3 41 63.4


User provided reference genes

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