Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 0.0e+00 1099.3 534 100.0
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 1.2e-143 514.2 518 55.6
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 3.4e-135 486.1 496 52.6
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 2.1e-132 476.9 506 51.2
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 2.7e-132 476.5 516 49.8
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 3.6e-132 476.1 520 50.4
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.8e-131 473.8 496 52.0
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 8.8e-131 471.5 511 49.5
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.1e-130 471.1 522 50.6
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 9.7e-130 468.0 534 49.4
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 1.7e-129 467.2 513 49.3
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 2.2e-129 466.8 526 50.6
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 6.3e-129 465.3 519 49.5
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 2.4e-128 463.4 496 51.8
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 3.4e-127 459.5 529 49.5
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 3.8e-126 456.1 510 48.4
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 6.5e-126 455.3 511 48.5
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 9.4e-125 451.4 524 49.2
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 9.4e-125 451.4 522 49.4
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 4.7e-124 449.1 503 49.9
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 1.8e-123 447.2 495 49.1
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.5e-122 444.1 498 48.6
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 1.2e-119 434.5 525 48.6
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.5e-119 434.1 485 50.1
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 1.3e-118 431.0 507 47.5
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 8.5e-118 428.3 543 47.7
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 8.5e-118 428.3 511 47.9
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 1.4e-117 427.6 412 56.3
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 5.5e-117 425.6 476 51.5
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.2e-116 424.5 485 48.0
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 8.8e-115 418.3 555 44.7
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 3.3e-114 416.4 535 46.5
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 4.4e-114 416.0 506 47.8
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 9.7e-114 414.8 505 46.3
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 2.2e-113 413.7 506 47.8
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 2.8e-113 413.3 516 47.1
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 7.7e-111 405.2 528 47.2
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 3.8e-110 402.9 509 46.0
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.1e-109 401.4 511 44.8
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 9.4e-109 398.3 509 46.2
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 1.6e-108 397.5 525 44.4
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 3.3e-106 389.8 524 44.7
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 1.3e-105 387.9 522 44.1
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 1.7e-105 387.5 525 42.1
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 1.4e-104 384.4 525 42.9
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.4e-104 384.4 505 43.8
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 9.1e-104 381.7 486 45.9
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 3.8e-102 376.3 491 46.2
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 6.5e-102 375.6 513 43.5
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 1.1e-101 374.8 506 43.1
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 3.2e-101 373.2 394 50.5
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 2.1e-100 370.5 499 44.1
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 5.2e-99 365.9 523 43.4
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 5.7e-98 362.5 520 43.8
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 9.8e-98 361.7 519 43.9
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 5.5e-93 345.9 488 43.9
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 1.6e-92 344.4 509 39.7
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 3.0e-91 340.1 316 59.8
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 4.1e-88 329.7 501 40.5
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 1.9e-85 320.9 416 43.0
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 2.8e-84 317.0 386 48.4
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 2.3e-83 313.9 493 37.1
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 1.2e-82 311.6 493 37.5
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 4.9e-81 306.2 513 38.2
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 8.3e-81 305.4 508 38.2
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 9.2e-80 302.0 313 52.1
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 6.0e-79 299.3 524 40.5
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.5e-77 293.9 376 43.6
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 1.2e-76 291.6 496 35.9
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.6e-76 291.2 512 38.5
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 3.6e-76 290.0 498 40.6
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 1.4e-75 288.1 497 38.8
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 5.2e-75 286.2 523 36.3
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 1.2e-74 285.0 500 35.8
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 2.6e-74 283.9 495 37.6
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 4.4e-74 283.1 495 37.2
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 7.5e-74 282.3 495 37.0
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 1.3e-73 281.6 308 48.1
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 1.7e-73 281.2 495 37.2
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 2.4e-72 277.3 495 36.8
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 7.0e-72 275.8 491 37.9
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 2.5e-69 267.3 330 44.8
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.1e-68 264.2 242 56.2
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 4.7e-68 263.1 304 47.4
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 1.4e-67 261.5 509 34.4
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 9.2e-64 248.8 329 48.0
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 3.5e-63 246.9 564 33.5
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 3.9e-62 243.4 519 32.2
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 2.8e-60 237.3 312 44.9
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 2.0e-58 231.1 242 49.2
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 4.9e-57 226.5 313 42.5
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 9.3e-56 222.2 261 46.0
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 8.7e-54 215.7 208 54.3
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 2.7e-47 194.1 268 42.9
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.0e-46 192.2 245 44.9
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 2.8e-44 184.1 378 33.6
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 6.2e-44 183.0 173 55.5
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 5.3e-43 179.9 167 59.3
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 9.9e-42 175.6 164 57.9
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 3.5e-39 167.2 166 53.6
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 1.1e-35 155.6 297 34.7
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 6.5e-33 146.4 179 45.3
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.5e-32 144.4 461 25.8
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 7.1e-32 142.9 159 47.2
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.3e-30 137.9 140 55.7
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.3e-25 122.1 162 45.1
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 2.1e-23 114.8 123 49.6
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 3.0e-14 84.3 140 42.1
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 3.9e-14 84.0 55 67.3
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 5.1e-14 83.6 77 54.5
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 3.1e-11 74.3 130 44.6
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 2.0e-10 71.6 115 44.3
MCO09G489 Micromonas commoda HOM05D006715 ORTHO05D008345 2.9e-09 67.8 403 23.3
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 3.6e-07 60.8 88 35.2
TAR381G0879 Trochodendron aralioides HOM05D006715 ORTHO05D008345 4.7e-07 60.5 172 28.5
COL.COLO4_38230 Corchorus olitorius HOM05D004492 ORTHO05D005602 1.4e-06 58.9 199 23.1


User provided reference genes

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