Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 2.1e-299 1031.6 511 100.0
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 9.7e-188 660.6 458 74.9
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 6.3e-187 657.9 457 71.6
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 5.3e-186 654.8 506 67.2
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 1.7e-184 649.8 463 71.1
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 6.5e-184 647.9 461 72.5
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 6.5e-184 647.9 495 67.9
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 7.2e-175 617.8 463 65.0
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 3.6e-174 615.5 467 66.4
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 3.6e-174 615.5 504 64.1
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 1.8e-173 613.2 494 64.6
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 8.8e-173 610.9 458 65.9
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.5e-172 610.1 496 61.7
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 1.5e-172 610.1 461 64.2
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 3.4e-172 609.0 461 64.0
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 2.2e-171 606.3 480 63.3
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 7.0e-170 601.3 468 65.4
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 5.0e-168 595.1 461 62.7
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 1.2e-166 590.5 500 59.8
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.9e-165 584.3 471 62.8
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 3.4e-164 582.4 464 65.9
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 7.5e-164 581.3 477 63.5
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 3.7e-163 578.9 455 64.8
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 3.4e-156 555.8 464 64.0
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.9e-155 552.7 459 61.9
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.4e-154 550.4 459 61.9
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 4.1e-154 548.9 505 58.8
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 5.4e-154 548.5 459 61.7
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 7.6e-132 474.9 473 53.9
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 1.1e-130 471.1 338 70.7
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 1.1e-111 407.9 454 46.7
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 1.9e-111 407.1 515 44.3
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 7.6e-108 395.2 499 43.7
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 3.2e-98 363.2 400 50.5
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 3.1e-93 346.7 310 57.1
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 3.1e-93 346.7 272 63.6
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 1.5e-87 327.8 426 44.6
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.1e-65 252.7 236 58.5
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 1.0e-64 251.9 241 50.6
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 1.0e-64 251.9 241 50.6
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 9.1e-61 238.8 228 57.5
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 4.5e-60 236.5 200 56.5
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.8e-59 233.4 187 64.7
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 5.0e-59 233.0 499 34.1
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 2.8e-57 227.3 318 47.5
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 3.4e-55 220.3 174 63.8
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.5e-55 219.2 182 61.5
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.8e-55 218.8 182 62.1
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.4e-53 213.0 182 61.0
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.0e-51 208.8 174 62.1
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 2.5e-50 204.1 258 50.4
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 5.6e-50 203.0 178 62.4
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.6e-49 200.3 167 61.7
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 1.0e-48 198.7 263 47.5
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 6.4e-46 189.5 240 43.8
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.5e-42 178.3 181 53.6
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.9e-40 169.1 142 57.7
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.2e-39 168.7 142 57.7
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.6e-39 167.5 158 57.0
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.2e-37 159.1 121 66.9
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 4.6e-28 130.2 113 59.3
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.7e-27 128.3 112 59.8
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 6.8e-24 116.3 194 40.2
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 9.9e-23 112.5 167 46.7
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.7e-22 111.7 128 46.1
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 2.9e-22 110.9 357 28.6
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.9e-21 108.2 81 69.1
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 4.2e-21 107.1 313 29.4
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 1.2e-20 105.5 71 63.4
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 4.3e-18 97.1 124 42.7
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 9.9e-15 85.9 111 50.5
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 1.4e-13 82.0 85 47.1
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 2.4e-13 81.3 136 41.2
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 1.2e-12 79.0 56 69.6
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 6.0e-12 76.6 76 44.7
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.2e-07 62.4 182 33.0
PGSC0003DMG400013554 Solanum tuberosum HOM05D007982 ORTHO05D010951 4.5e-07 60.5 84 40.5
Nitab4.5_0005642g0050 Nicotiana tabacum HOM05D007982 ORTHO05D283853 2.2e-06 58.2 93 34.4
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 6.4e-06 56.6 303 25.4


User provided reference genes

Program Settings