Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034307001 Vitis vinifera HOM05D004618 ORTHO05D005318 7.8e-129 463.8 228 100.0
GSVIVG01001871001 Vitis vinifera HOM05D004618 ORTHO05D005318 6.6e-128 460.7 228 99.6
GSVIVG01003592001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.6e-126 456.1 228 98.7
GSVIVG01012969001 Vitis vinifera HOM05D004618 ORTHO05D005318 2.3e-120 435.6 228 94.3
TAR365G1130 Trochodendron aralioides HOM05D004618 ORTHO05D005318 6.4e-91 337.8 225 70.7
Thecc.04G208200 Theobroma cacao HOM05D004618 ORTHO05D005318 8.4e-91 337.4 227 73.6
Cfa014885 Carpinus fangiana HOM05D004618 ORTHO05D005318 1.1e-90 337.0 225 72.0
Dinv38259 Davidia involucrata HOM05D004618 ORTHO05D005318 4.2e-90 335.1 198 81.3
Gohir.A09G052300 Gossypium hirsutum HOM05D004618 ORTHO05D005318 7.1e-90 334.3 228 71.5
Gohir.D09G052960 Gossypium hirsutum HOM05D004618 ORTHO05D005318 3.5e-89 332.0 228 70.6
GSVIVG01013292001 Vitis vinifera HOM05D004618 ORTHO05D005318 3.5e-89 332.0 162 98.8
Potri.001G050300 Populus trichocarpa HOM05D004618 ORTHO05D005318 1.0e-88 330.5 226 68.6
Actinidia34629 Actinidia chinensis HOM05D004618 ORTHO05D005318 1.8e-88 329.7 225 69.8
Gorai.006G056100 Gossypium raimondii HOM05D004618 ORTHO05D005318 1.8e-88 329.7 228 70.2
vmacro00499 Vaccinium macrocarpon HOM05D004618 ORTHO05D005318 2.3e-88 329.3 225 68.0
Ciclev10006732m.g Citrus clementina HOM05D004618 ORTHO05D005318 6.7e-88 327.8 225 69.3
CiPaw.01G124800 Carya illinoinensis HOM05D004618 ORTHO05D005318 8.7e-88 327.4 226 69.0
Duzib212G0527 Durio zibethinus HOM05D004618 ORTHO05D005318 1.5e-87 326.6 226 69.0
Hma1.2p1_3134F.1_g332990 Hydrangea macrophylla HOM05D004618 ORTHO05D005318 5.7e-87 324.7 224 69.6
TWI09G1249 Tripterygium wilfordii HOM05D004618 ORTHO05D005318 9.6e-87 323.9 225 67.1
Sabra01G0035200 Salix brachista HOM05D004618 ORTHO05D005318 2.8e-86 322.4 226 66.4
Lj3A569T42 Lonicera japonica HOM05D004618 ORTHO05D005318 6.2e-86 321.2 206 72.8
Nn1g07791 Nelumbo nucifera HOM05D004618 ORTHO05D005318 1.1e-85 320.5 226 68.1
Manes.15G051466 Manihot esculenta HOM05D004618 ORTHO05D005318 3.1e-85 318.9 226 66.4
MBI07_g23668_MAGBIO Magnolia biondii HOM05D004618 ORTHO05D005318 1.5e-84 316.6 226 67.3
Nitab4.5_0000306g0090 Nicotiana tabacum HOM05D004618 ORTHO05D005318 1.3e-83 313.5 226 68.1
DCAR_024331 Daucus carota HOM05D004618 ORTHO05D005318 1.7e-83 313.2 226 63.7
MD09G1000200 Malus domestica HOM05D004618 ORTHO05D005318 5.5e-82 308.1 225 66.2
FAN17G0872 Fragaria x ananassa HOM05D004618 ORTHO05D005318 9.3e-82 307.4 225 66.7
THA.LOC104826111 Tarenaya hassleriana HOM05D004618 ORTHO05D005318 1.2e-81 307.0 226 65.5
Cc03_g07450 Coffea canephora HOM05D004618 ORTHO05D005318 3.5e-81 305.4 226 64.2
FvH4_4g00330 Fragaria vesca HOM05D004618 ORTHO05D005318 4.6e-81 305.1 225 66.7
AL1G14450 Arabidopsis lyrata HOM05D004618 ORTHO05D005318 1.0e-80 303.9 226 64.6
HanXRQChr10g0310121 Helianthus annuus HOM05D004618 ORTHO05D005318 1.0e-80 303.9 226 64.2
Solyc09g091650.3 Solanum lycopersicum HOM05D004618 ORTHO05D005318 1.0e-80 303.9 226 65.0
FAN12G0850 Fragaria x ananassa HOM05D004618 ORTHO05D005318 2.3e-80 302.8 225 65.8
ECA248G0292 Erigeron canadensis HOM05D004618 ORTHO05D005318 3.0e-80 302.4 226 62.8
RcHm_v2.0_Chr4g0385211 Rosa chinensis HOM05D004618 ORTHO05D005318 3.9e-80 302.0 225 64.9
AT1G04730 Arabidopsis thaliana HOM05D004618 ORTHO05D005318 6.7e-80 301.2 226 63.7
Lsat_1_v5_gn_1_72241 Lactuca sativa HOM05D004618 ORTHO05D005318 6.7e-80 301.2 228 64.5
FAN22G1357 Fragaria x ananassa HOM05D004618 ORTHO05D005318 2.5e-79 299.3 225 65.3
Aqoxy2G03762 Aquilegia oxysepala HOM05D004618 ORTHO05D005318 3.3e-79 298.9 225 63.1
Glyma.20G075951 Glycine max HOM05D004618 ORTHO05D005318 4.3e-79 298.5 214 67.3
Glyma.10G123400 Glycine max HOM05D004618 ORTHO05D005318 7.4e-79 297.7 214 66.4
Migut.N00349 Erythranthe guttata HOM05D004618 ORTHO05D005318 2.2e-78 296.2 225 62.7
Carub.0001s0398 Capsella rubella HOM05D004618 ORTHO05D005318 2.8e-78 295.8 226 63.3
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 3.7e-78 295.4 214 65.4
CANSAT78G0267 Cannabis sativa HOM05D004618 ORTHO05D005318 6.3e-78 294.7 225 64.4
Prupe.3G316000 Prunus persica HOM05D004618 ORTHO05D005318 1.1e-77 293.9 225 63.6
Phvul.007G235800 Phaseolus vulgaris HOM05D004618 ORTHO05D005318 2.4e-77 292.7 214 66.4
Psat6g048480 Pisum sativum HOM05D004618 ORTHO05D005318 6.9e-77 291.2 209 68.4
CAN.G500.60 Capsicum annuum HOM05D004618 ORTHO05D005318 2.0e-76 289.7 226 62.8
PSO063G1896 Papaver somniferum HOM05D004618 ORTHO05D005318 2.0e-76 289.7 215 66.0
Sopen09g034560 Solanum pennellii HOM05D004618 ORTHO05D005318 2.0e-76 289.7 213 65.7
Eucgr.H02841 Eucalyptus grandis HOM05D004618 ORTHO05D005318 2.6e-76 289.3 221 63.3
PSO017G2612 Papaver somniferum HOM05D004618 ORTHO05D005318 2.6e-76 289.3 215 66.0
MELO3C006327.2 Cucumis melo HOM05D004618 ORTHO05D005318 4.5e-76 288.5 226 59.7
Medtr1g047790 Medicago truncatula HOM05D004618 ORTHO05D005318 4.5e-76 288.5 226 64.2
Lj6g0012936 Lotus japonicus HOM05D004618 ORTHO05D005318 5.0e-75 285.0 209 64.1
A10p03150 Brassica napus HOM05D004618 ORTHO05D005318 6.5e-75 284.6 226 60.6
BraA10t42588Z Brassica rapa HOM05D004618 ORTHO05D005318 6.5e-75 284.6 226 60.6
Sp1g03570 Schrenkiella parvula HOM05D004618 ORTHO05D005318 6.5e-75 284.6 226 61.5
MSTRG.24629 Avicennia marina HOM05D004618 ORTHO05D005318 8.5e-75 284.3 225 60.0
C05p02920 Brassica napus HOM05D004618 ORTHO05D005318 1.1e-74 283.9 226 61.1
Sc19g0007110 Simmondsia chinensis HOM05D004618 ORTHO05D005318 4.2e-74 282.0 226 61.9
Ca_13906_v3 Cicer arietinum L. HOM05D004618 ORTHO05D005318 5.5e-74 281.6 226 63.3
CARHR004120 Cardamine hirsuta HOM05D004618 ORTHO05D005318 7.2e-74 281.2 226 60.6
Thhalv10006720m.g Eutrema salsugineum HOM05D004618 ORTHO05D005318 1.2e-73 280.4 226 60.2
BolC5t29073H Brassica oleracea HOM05D004618 ORTHO05D005318 4.6e-73 278.5 226 60.6
CsaV3_3G011150 Cucumis sativus L. HOM05D004618 ORTHO05D005318 1.0e-72 277.3 225 58.2
Lalb_Chr03g0036601 Lupinus albus HOM05D004618 ORTHO05D005318 1.0e-72 277.3 225 60.4
Peaxi162Scf00047g01035 Petunia axillaris HOM05D004618 ORTHO05D005318 1.0e-72 277.3 226 61.1
Sed0003506 Sechium edule HOM05D004618 ORTHO05D005318 1.0e-72 277.3 226 58.4
Haze_11582 Corylus avellana HOM05D004618 ORTHO05D005318 8.8e-72 274.2 181 72.4
AUR62020811 Chenopodium quinoa HOM05D004618 ORTHO05D005318 1.1e-71 273.9 228 57.9
SGA_v2.0_scaffold323G48644 Striga asiatica HOM05D004618 ORTHO05D005318 1.1e-71 273.9 225 58.2
arahy.Tifrunner.gnm1.ann1.30ZQL1 Arachis hypogaea HOM05D004618 ORTHO05D005318 1.5e-71 273.5 250 55.2
Os03g0264800 Oryza sativa ssp. japonica HOM05D004618 ORTHO05D005318 4.8e-70 268.5 227 57.7
arahy.Tifrunner.gnm1.ann1.NE6RSN Arachis hypogaea HOM05D004618 ORTHO05D005318 1.4e-69 266.9 250 54.0
ClCG05G003490 Citrullus lanatus HOM05D004618 ORTHO05D005318 5.9e-68 261.5 277 49.1
ATR1126G077 Amborella trichopoda HOM05D004618 ORTHO05D005318 2.9e-67 259.2 226 57.1
Ah.13g078120 Amaranthus hybridus HOM05D004618 ORTHO05D005318 3.8e-67 258.8 228 55.7
Zm00001eb011700 Zea mays HOM05D004618 ORTHO05D005318 1.1e-66 257.3 227 54.6
BolC8t46953H Brassica oleracea HOM05D004618 ORTHO05D005318 2.3e-64 249.6 226 56.6
EL10Ac3g07492 Beta vulgaris HOM05D004618 ORTHO05D005318 5.1e-64 248.4 244 51.2
HPP92_001457 Vanilla planifolia HOM05D004618 ORTHO05D005318 4.4e-63 245.4 226 52.7
TPR.G19802 Trifolium pratense HOM05D004618 ORTHO05D005318 1.8e-61 240.0 235 56.6
C08p01440 Brassica napus HOM05D004618 ORTHO05D005318 5.9e-60 235.0 226 54.4
SHI01092 Sapria himalayana HOM05D004618 ORTHO05D005318 1.5e-58 230.3 197 54.8
SEGI_18128 Sequoiadendron giganteum HOM05D004618 ORTHO05D005318 5.5e-58 228.4 206 53.9
unitig_21.g20007 Utricularia gibba HOM05D004618 ORTHO05D005318 7.2e-58 228.0 191 57.1
HPP92_001444 Vanilla planifolia HOM05D004618 ORTHO05D005318 2.7e-57 226.1 178 58.4
Aa31LG1G20160 Aethionema arabicum HOM05D004618 ORTHO05D005318 1.1e-55 220.7 263 46.4
GSVIVG01034323001 Vitis vinifera HOM05D004618 ORTHO05D005318 3.3e-55 219.2 112 96.4
SalBow3G3268 Salvia bowleyana HOM05D004618 ORTHO05D005318 4.8e-54 215.3 175 60.6
Lj3C557T17 Lonicera japonica HOM05D004618 ORTHO05D005318 1.6e-49 200.3 122 74.6
Atru.chr4.1755 Acer truncatum HOM05D004618 ORTHO05D005318 6.1e-49 198.4 226 46.9
GSVIVG01029095001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.1e-42 177.6 112 80.4
Mapoly0122s0062 Marchantia polymorpha HOM05D004618 ORTHO05D005318 5.2e-40 168.7 209 39.2
BcaC07g36884 Brassica carinata HOM05D004618 ORTHO05D005318 6.8e-40 168.3 239 43.5
Pp3c7_23730 Physcomitrium patens HOM05D004618 ORTHO05D005318 1.7e-38 163.7 208 39.9
GSVIVG01012955001 Vitis vinifera HOM05D004618 ORTHO05D005318 7.7e-36 154.8 81 93.8
AagrBONN_evm.TU.Sc2ySwM_228.5703 Anthoceros agrestis HOM05D004618 ORTHO05D005318 4.2e-34 149.1 209 34.4
CBR_g33934 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-32 144.4 208 33.7
GSVIVG01003879001 Vitis vinifera HOM05D004618 ORTHO05D005318 3.4e-31 139.4 67 100.0
COL.COLO4_20296 Corchorus olitorius HOM05D004618 ORTHO05D005318 6.8e-16 88.6 66 66.7
Oeu063486.3 Olea europaea HOM05D004618 ORTHO05D005318 7.1e-13 78.6 64 59.4
TPR.G34820 Trifolium pratense HOM05D004618 ORTHO05D005318 7.8e-12 75.1 54 64.8
Cre16.g686950 Chlamydomonas reinhardtii HOM05D004618 ORTHO05D005318 5.6e-10 68.9 177 26.0
MCO09G046 Micromonas commoda HOM05D004618 ORTHO05D005318 1.8e-08 63.9 202 24.8


User provided reference genes

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