Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034250001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.2e-26 122.5 64 100.0
GSVIVG01016962001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.0e-14 82.8 56 78.6
Sabra13G0006300 Salix brachista HOM05D000101 ORTHO05D000089 1.6e-10 68.9 63 54.0
GSVIVG01020273001 Vitis vinifera HOM05D000101 ORTHO05D000089 5.0e-09 63.9 56 62.5
COL.COLO4_30336 Corchorus olitorius HOM05D000101 ORTHO05D000089 1.5e-08 62.4 63 54.0
Thhalv10028060m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 1.5e-08 62.4 60 55.0
GSVIVG01020290001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.5e-08 62.4 56 55.4
Potri.013G007400 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.9e-08 62.0 63 50.8
Dinv11894 Davidia involucrata HOM05D000101 ORTHO05D000089 2.5e-08 61.6 54 64.8
Dinv24082 Davidia involucrata HOM05D000101 ORTHO05D000089 2.5e-08 61.6 54 64.8
Duzib235G0825 Durio zibethinus HOM05D000101 ORTHO05D000089 3.3e-08 61.2 57 54.4
Manes.11G053100 Manihot esculenta HOM05D000101 ORTHO05D000089 3.3e-08 61.2 62 51.6
CARHR215210 Cardamine hirsuta HOM05D000101 ORTHO05D000089 4.3e-08 60.8 63 54.0
Ciclev10027214m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.6e-08 60.5 63 50.8
Duzib168G0797 Durio zibethinus HOM05D000101 ORTHO05D000089 5.6e-08 60.5 63 52.4
GSVIVG01020289001 Vitis vinifera HOM05D000101 ORTHO05D000089 7.3e-08 60.1 63 57.1
Dinv24079 Davidia involucrata HOM05D000101 ORTHO05D000089 9.5e-08 59.7 54 63.0
Eucgr.F04244 Eucalyptus grandis HOM05D000101 ORTHO05D000089 9.5e-08 59.7 61 52.5
GSVIVG01020267001 Vitis vinifera HOM05D000101 ORTHO05D000089 9.5e-08 59.7 56 58.9
Eucgr.L01366 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.2e-07 59.3 54 53.7
Thecc.06G023400 Theobroma cacao HOM05D000101 ORTHO05D000089 1.6e-07 58.9 63 50.8
Thecc.K0005300 Theobroma cacao HOM05D000101 ORTHO05D000089 1.6e-07 58.9 56 53.6
C05p13650 Brassica napus HOM05D000101 ORTHO05D000089 2.1e-07 58.5 63 50.8
BolC5t30101H Brassica oleracea HOM05D000101 ORTHO05D000089 2.1e-07 58.5 63 50.8
CARHR016040 Cardamine hirsuta HOM05D000101 ORTHO05D000089 2.1e-07 58.5 63 49.2
Dinv11884 Davidia involucrata HOM05D000101 ORTHO05D000089 2.1e-07 58.5 54 57.4
Gohir.D05G372950 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.1e-07 58.5 63 50.8
BolC6t35700H Brassica oleracea HOM05D000101 ORTHO05D000089 2.8e-07 58.2 60 53.3
Ciclev10027180m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.8e-07 58.2 56 55.4
Duzib268G1774 Durio zibethinus HOM05D000101 ORTHO05D000089 2.8e-07 58.2 57 52.6
Thhalv10023266m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 2.8e-07 58.2 62 51.6
Gorai.009G441500 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.8e-07 58.2 63 50.8
Gorai.011G081200 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.8e-07 58.2 56 51.8
Thecc.06G071900 Theobroma cacao HOM05D000101 ORTHO05D000089 2.8e-07 58.2 56 51.8
GSVIVG01017148001 Vitis vinifera HOM05D000101 ORTHO05D000089 2.8e-07 58.2 63 52.4
Gorai.009G441400 Gossypium raimondii HOM05D000101 ORTHO05D000089 3.6e-07 57.8 63 50.8
Duzib268G0111 Durio zibethinus HOM05D000101 ORTHO05D000089 4.7e-07 57.4 57 52.6
Eucgr.L01173 Eucalyptus grandis HOM05D000101 ORTHO05D000089 4.7e-07 57.4 62 46.8
Eucgr.L01175 Eucalyptus grandis HOM05D000101 ORTHO05D000089 4.7e-07 57.4 56 51.8
Gohir.D05G372900 Gossypium hirsutum HOM05D000101 ORTHO05D000089 4.7e-07 57.4 63 50.8
Duzib268G0022 Durio zibethinus HOM05D000101 ORTHO05D000089 6.2e-07 57.0 57 52.6
Gohir.A04G013250 Gossypium hirsutum HOM05D000101 ORTHO05D000089 6.2e-07 57.0 63 50.8
BcaC02g11243 Brassica carinata HOM05D000101 ORTHO05D000089 8.1e-07 56.6 63 47.6
C04p18920 Brassica napus HOM05D000101 ORTHO05D000089 8.1e-07 56.6 63 47.6
BolC4t23422H Brassica oleracea HOM05D000101 ORTHO05D000089 8.1e-07 56.6 63 47.6
BolC6t35796H Brassica oleracea HOM05D000101 ORTHO05D000089 8.1e-07 56.6 56 53.6
GSVIVG01017142001 Vitis vinifera HOM05D000101 ORTHO05D000089 8.1e-07 56.6 63 52.4
GSVIVG01017143001 Vitis vinifera HOM05D000101 ORTHO05D000089 8.1e-07 56.6 63 52.4
Eucgr.B00330 Eucalyptus grandis HOM05D000101 ORTHO05D000089 1.4e-06 55.8 53 52.8
Thhalv10028316m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 1.4e-06 55.8 63 50.8
Gohir.D01G017150 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.4e-06 55.8 64 51.6
PGR044G1659 Punica granatum HOM05D000101 ORTHO05D000089 1.4e-06 55.8 51 60.8
TAR629G1104 Trochodendron aralioides HOM05D000009 ORTHO05D000008 1.4e-06 55.8 62 45.2
GSVIVG01017146001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.4e-06 55.8 63 54.0
Duzib192G0955 Durio zibethinus HOM05D000101 ORTHO05D000089 1.8e-06 55.5 56 50.0
Thhalv10028114m.g Eutrema salsugineum HOM05D000101 ORTHO05D000089 1.8e-06 55.5 63 49.2
Thecc.06G071500 Theobroma cacao HOM05D000101 ORTHO05D000089 1.8e-06 55.5 56 51.8
Atru.chr1.3061 Acer truncatum HOM05D000101 ORTHO05D000089 2.3e-06 55.1 56 51.8
Duzib268G1765 Durio zibethinus HOM05D000101 ORTHO05D000089 2.3e-06 55.1 56 51.8
Gohir.A04G013100 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.3e-06 55.1 63 49.2
Gohir.A05G302900 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.3e-06 55.1 63 54.0
BraA06t23542Z Brassica rapa HOM05D000101 ORTHO05D000089 3.1e-06 54.7 63 52.4
Gohir.A01G017150 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.1e-06 54.7 56 55.4
AT1G61190 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 4.0e-06 54.3 62 50.0
Duzib235G0358 Durio zibethinus HOM05D000101 ORTHO05D000089 4.0e-06 54.3 57 49.1
Duzib268G0920 Durio zibethinus HOM05D000101 ORTHO05D000089 4.0e-06 54.3 57 50.9
Eucgr.L01638 Eucalyptus grandis HOM05D000101 ORTHO05D000089 4.0e-06 54.3 56 50.0
RcHm_v2.0_Chr2g0136891 Rosa chinensis HOM05D000101 ORTHO05D000089 4.0e-06 54.3 62 45.2
GSVIVG01017079001 Vitis vinifera HOM05D000101 ORTHO05D000089 4.0e-06 54.3 63 50.8
Ciclev10024845m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.2e-06 53.9 63 42.9
Ciclev10027635m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.2e-06 53.9 63 42.9
RcHm_v2.0_Chr4g0407611 Rosa chinensis HOM05D000101 ORTHO05D000089 5.2e-06 53.9 56 53.6
Atru.chr2.3807 Acer truncatum HOM05D000101 ORTHO05D000089 6.8e-06 53.5 62 46.8
AT1G15890 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 6.8e-06 53.5 63 49.2
BraA06t23509Z Brassica rapa HOM05D000101 ORTHO05D000089 6.8e-06 53.5 63 52.4
AT1G51480 Arabidopsis thaliana HOM05D000101 ORTHO05D000089 8.9e-06 53.1 63 50.8
CARHR280780 Cardamine hirsuta HOM05D000101 ORTHO05D000089 8.9e-06 53.1 63 42.9
Ciclev10030667m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.9e-06 53.1 62 45.2
Ciclev10033566m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.9e-06 53.1 62 45.2
Eucgr.L02932 Eucalyptus grandis HOM05D000101 ORTHO05D000089 8.9e-06 53.1 55 50.9
PGR102G3083 Punica granatum HOM05D000101 ORTHO05D000089 8.9e-06 53.1 58 51.7
Sp1g14190 Schrenkiella parvula HOM05D000101 ORTHO05D000089 8.9e-06 53.1 63 47.6
GSVIVG01017134001 Vitis vinifera HOM05D000101 ORTHO05D000089 8.9e-06 53.1 63 50.8
GSVIVG01017232001 Vitis vinifera HOM05D000101 ORTHO05D000089 8.9e-06 53.1 59 52.5


User provided reference genes

Program Settings