Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.3e-210 736.1 363 100.0
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 4.1e-116 422.2 300 73.3
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 1.7e-114 416.8 301 71.8
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 5.1e-114 415.2 312 71.5
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 1.8e-111 406.8 303 71.3
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.2e-110 404.1 306 71.6
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 1.9e-108 396.7 302 69.2
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 7.6e-102 374.8 310 66.1
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 8.4e-101 371.3 302 68.2
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.9e-100 370.2 304 67.4
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.6e-99 367.1 306 67.3
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 1.1e-97 360.9 294 66.3
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 1.1e-97 360.9 298 66.8
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 3.3e-97 359.4 311 65.6
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 2.8e-96 356.3 305 63.6
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.4e-95 354.0 310 64.5
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.8e-95 353.6 311 65.0
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 2.4e-95 353.2 294 64.3
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 3.1e-95 352.8 304 64.1
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 2.0e-94 350.1 301 64.5
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.7e-93 347.1 301 65.1
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 2.2e-93 346.7 306 63.7
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 2.9e-93 346.3 301 63.5
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 1.9e-92 343.6 306 64.1
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 9.3e-92 341.3 313 61.7
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 1.2e-91 340.9 300 63.3
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 2.1e-91 340.1 338 59.5
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 2.7e-91 339.7 311 63.0
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.3e-90 337.4 310 61.9
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 2.3e-90 336.7 302 61.6
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 3.9e-90 335.9 304 63.2
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 5.1e-90 335.5 295 63.7
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.1e-89 334.3 294 66.0
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 1.9e-89 333.6 331 59.8
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 1.9e-89 333.6 317 60.6
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 2.5e-89 333.2 301 63.1
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 5.6e-89 332.0 331 58.0
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 7.4e-89 331.6 307 59.0
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 7.4e-89 331.6 313 60.7
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.6e-88 330.5 303 60.1
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 8.1e-88 328.2 306 61.1
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 8.1e-88 328.2 277 63.2
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 8.1e-88 328.2 289 63.0
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 9.0e-87 324.7 293 61.4
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 1.2e-86 324.3 306 60.5
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 1.2e-86 324.3 317 60.3
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 1.5e-86 323.9 283 62.9
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.0e-86 323.6 301 59.5
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 1.3e-85 320.9 290 61.4
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 2.9e-85 319.7 300 60.0
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 3.8e-85 319.3 284 63.0
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.9e-85 318.9 290 61.4
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 4.9e-85 318.9 300 61.7
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.4e-84 317.4 290 61.0
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.5e-83 312.8 284 62.0
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.5e-83 312.8 284 62.0
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 1.0e-82 311.2 289 59.5
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 1.6e-80 303.9 291 62.2
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.0e-79 299.3 317 57.7
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.5e-78 297.4 277 59.9
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 3.4e-78 296.2 327 54.4
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.5e-78 295.8 297 59.6
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 3.8e-77 292.7 305 60.0
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 4.9e-77 292.4 240 64.2
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 6.5e-77 292.0 299 56.5
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 5.5e-76 288.9 306 52.9
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.2e-75 287.7 312 54.8
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.1e-75 287.0 294 58.8
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 1.0e-74 284.6 285 59.6
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 2.5e-73 280.0 279 58.8
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 4.3e-73 279.3 305 54.8
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 4.3e-73 279.3 290 57.9
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 7.4e-73 278.5 300 56.0
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.3e-72 277.7 308 54.2
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 1.3e-72 277.7 305 55.4
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 4.8e-72 275.8 294 56.1
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 1.1e-71 274.6 303 54.5
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 2.6e-70 270.0 302 53.3
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 5.9e-70 268.9 309 53.4
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 6.1e-67 258.8 323 50.5
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 7.9e-67 258.5 355 47.9
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 1.5e-65 254.2 348 47.7
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 2.0e-65 253.8 207 67.1
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 4.3e-65 252.7 290 50.3
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 5.7e-65 252.3 323 51.1
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 2.8e-64 250.0 310 50.3
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 1.1e-63 248.1 352 47.4
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 2.2e-61 240.4 156 76.9
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.1e-60 238.0 390 42.6
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 1.4e-60 237.7 251 59.8
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 1.0e-53 214.9 285 47.7
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 7.2e-52 208.8 109 85.3
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 3.6e-51 206.5 109 88.1
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 1.4e-50 204.5 272 44.5
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 2.6e-49 200.3 111 83.8
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 1.6e-46 191.0 187 59.4
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 2.2e-45 187.2 126 70.6
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 3.8e-45 186.4 126 70.6
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.2e-44 183.3 98 88.8
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 2.1e-43 180.6 98 85.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 4.0e-42 176.4 136 61.0
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 1.5e-41 174.5 126 71.4
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 6.3e-40 169.1 93 82.8
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 2.2e-37 160.6 124 60.5
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 3.2e-36 156.8 204 51.0
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 4.2e-36 156.4 98 77.6
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 1.0e-34 151.8 220 48.6
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 1.2e-33 148.3 98 69.4
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 6.1e-27 125.9 197 46.7
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 3.9e-21 106.7 212 42.0
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 4.3e-20 103.2 125 47.2
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.0e-18 96.7 192 39.1
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 8.3e-16 89.0 193 38.9
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 3.2e-15 87.0 101 52.5
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 3.2e-15 87.0 101 52.5
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 4.1e-15 86.7 101 52.5
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 4.1e-15 86.7 101 52.5
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.7e-13 81.3 82 54.9
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 3.3e-12 77.0 41 85.4
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.4e-10 71.6 196 36.2
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 8.9e-10 68.9 44 70.5
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 8.3e-08 62.4 109 42.2
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 3.5e-06 57.0 110 38.2
ATR0752G168 Amborella trichopoda HOM05D000182 ORTHO05D007352 4.6e-06 56.6 103 39.8
SEGI_28384 Sequoiadendron giganteum HOM05D001439 ORTHO05D017116 4.6e-06 56.6 112 38.4


User provided reference genes

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