Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 1.5e-46 189.1 94 100.0
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 4.6e-43 177.6 94 93.6
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 6.0e-43 177.2 94 93.6
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 7.8e-43 176.8 94 93.6
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 7.8e-43 176.8 94 93.6
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 7.8e-43 176.8 94 93.6
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 1.0e-42 176.4 94 93.6
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 1.7e-42 175.6 94 92.6
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 1.7e-42 175.6 94 92.6
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 2.3e-42 175.3 94 91.5
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 2.3e-42 175.3 94 91.5
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 3.0e-42 174.9 94 92.6
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 3.0e-42 174.9 94 91.5
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 3.0e-42 174.9 94 91.5
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 5.1e-42 174.1 94 91.5
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 8.7e-42 173.3 94 90.4
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 1.1e-41 172.9 94 90.4
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 1.5e-41 172.6 94 90.4
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 1.5e-41 172.6 94 91.5
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 1.9e-41 172.2 94 90.4
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 2.5e-41 171.8 94 88.3
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 3.3e-41 171.4 94 88.3
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 3.3e-41 171.4 93 89.2
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 4.3e-41 171.0 94 89.4
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 4.3e-41 171.0 93 88.2
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 4.3e-41 171.0 94 90.4
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 7.3e-41 170.2 94 87.2
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 7.3e-41 170.2 94 90.4
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 7.3e-41 170.2 94 90.4
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 7.3e-41 170.2 94 90.4
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 7.3e-41 170.2 94 88.3
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 9.6e-41 169.9 94 88.3
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 9.6e-41 169.9 94 87.2
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 9.6e-41 169.9 94 88.3
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 9.6e-41 169.9 94 88.3
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 1.3e-40 169.5 94 89.4
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 1.3e-40 169.5 93 84.9
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 1.3e-40 169.5 93 84.9
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 1.3e-40 169.5 93 84.9
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 1.6e-40 169.1 94 87.2
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 1.6e-40 169.1 94 87.2
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 2.1e-40 168.7 94 89.4
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 2.1e-40 168.7 94 89.4
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 2.8e-40 168.3 94 86.2
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 2.8e-40 168.3 94 88.3
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 2.8e-40 168.3 94 86.2
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 2.8e-40 168.3 94 86.2
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 3.6e-40 167.9 94 87.2
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 3.6e-40 167.9 94 86.2
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 4.8e-40 167.5 94 88.3
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 4.8e-40 167.5 94 85.1
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 6.2e-40 167.2 94 86.2
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 6.2e-40 167.2 94 87.2
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 6.2e-40 167.2 94 87.2
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 1.4e-39 166.0 94 85.1
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 1.4e-39 166.0 94 85.1
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 1.4e-39 166.0 94 86.2
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 1.8e-39 165.6 94 86.2
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 2.4e-39 165.2 94 85.1
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 2.4e-39 165.2 94 87.2
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 2.4e-39 165.2 93 86.0
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 3.1e-39 164.9 94 87.2
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 9.0e-39 163.3 94 85.1
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 1.5e-38 162.5 93 84.9
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.5e-38 162.5 93 84.9
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.5e-38 162.5 93 84.9
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.5e-38 162.5 93 84.9
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.5e-38 162.5 93 84.9
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 2.0e-38 162.2 94 84.0
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 2.0e-38 162.2 94 84.0
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 2.0e-38 162.2 94 86.2
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 2.0e-38 162.2 94 84.0
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 3.4e-38 161.4 94 83.0
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 1.7e-37 159.1 96 84.4
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 2.2e-37 158.7 94 81.9
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.2e-37 158.7 94 81.9
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 2.9e-37 158.3 94 86.2
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 4.9e-37 157.5 95 84.2
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 6.4e-37 157.1 89 87.6
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 1.1e-36 156.4 94 79.8
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 1.4e-36 156.0 94 80.9
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 1.4e-36 156.0 92 81.5
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 1.4e-36 156.0 95 82.1
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 1.4e-36 156.0 117 71.8
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 1.9e-36 155.6 94 81.9
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 1.9e-36 155.6 95 82.1
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 2.4e-36 155.2 94 77.7
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.4e-36 155.2 94 80.9
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 2.4e-36 155.2 94 80.9
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 80.9
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 5.4e-36 154.1 94 79.8
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 7.1e-36 153.7 94 79.8
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 9.3e-36 153.3 94 79.8
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 9.3e-36 153.3 95 81.1
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 9.3e-36 153.3 94 79.8
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.2e-35 152.9 94 77.7
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 1.6e-35 152.5 94 78.7
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 2.1e-35 152.1 94 77.7
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 78.7
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 78.7
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 78.7
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 78.7
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 78.7
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 2.7e-35 151.8 94 77.7
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 3.5e-35 151.4 94 77.7
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 4.6e-35 151.0 94 76.6
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 4.6e-35 151.0 94 80.9
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 6.0e-35 150.6 94 80.9
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 7.9e-35 150.2 94 76.6
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 1.8e-34 149.1 94 75.5
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 3.0e-34 148.3 94 75.5
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 5.1e-34 147.5 94 75.5
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 6.7e-34 147.1 81 87.7
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 6.7e-34 147.1 93 76.3
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 8.7e-34 146.7 94 75.5
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 8.7e-34 146.7 94 75.5
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 8.7e-34 146.7 94 75.5
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 8.7e-34 146.7 94 75.5
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 8.7e-34 146.7 94 75.5
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 8.7e-34 146.7 93 75.3
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 8.7e-34 146.7 93 75.3
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 1.9e-33 145.6 93 75.3
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 4.3e-33 144.4 94 72.3
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 5.6e-33 144.1 81 85.2
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 7.4e-33 143.7 87 78.2
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 7.4e-33 143.7 95 76.8
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 7.4e-33 143.7 95 76.8
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 1.3e-32 142.9 87 79.3
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 1.6e-32 142.5 94 72.3
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.6e-32 142.5 150 54.7
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 2.1e-32 142.1 94 71.3
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 2.1e-32 142.1 90 74.4
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 3.7e-32 141.4 94 72.3
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 3.7e-32 141.4 94 72.3
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 3.7e-32 141.4 94 72.3
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 3.7e-32 141.4 95 75.8
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 4.8e-32 141.0 94 72.3
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 6.2e-32 140.6 87 75.9
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 1.4e-31 139.4 81 84.0
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 2.4e-31 138.7 94 71.3
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 2.4e-31 138.7 94 71.3
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 9.0e-31 136.7 78 89.7
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 1.2e-30 136.3 93 67.7
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 3.4e-30 134.8 90 73.3
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 4.5e-30 134.4 93 67.7
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 1.7e-29 132.5 87 75.9
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 1.7e-29 132.5 93 66.7
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 2.2e-29 132.1 87 73.6
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 6.4e-29 130.6 91 69.2
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 6.4e-29 130.6 91 69.2
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 8.4e-29 130.2 158 48.7
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 1.9e-28 129.0 93 64.5
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 3.2e-28 128.3 91 68.1
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 7.1e-28 127.1 91 67.0
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 3.5e-27 124.8 69 87.0
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 7.9e-27 123.6 94 72.3
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 7.9e-27 123.6 93 60.2
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 1.8e-26 122.5 93 58.1
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 5.1e-26 120.9 78 75.6
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 5.1e-26 120.9 95 65.3
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 8.7e-26 120.2 63 90.5
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 1.5e-25 119.4 87 66.7
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 1.9e-25 119.0 63 87.3
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 1.9e-25 119.0 62 91.9
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 3.3e-25 118.2 94 62.8
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 4.3e-25 117.9 62 88.7
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 4.8e-24 114.4 92 59.8
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 4.8e-24 114.4 84 71.4
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 3.1e-23 111.7 93 61.3
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 1.0e-21 106.7 95 64.2
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 1.0e-21 106.7 67 76.1
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 6.5e-21 104.0 90 61.1
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 6.5e-21 104.0 90 61.1
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 9.7e-17 90.1 79 49.4
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 1.1e-15 86.7 69 56.5
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 1.8e-15 85.9 93 47.3
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 1.1e-12 76.6 77 48.1
SHI25717 Sapria himalayana HOM05D003862 ORTHO05D004398 1.8e-07 59.3 61 49.2
CDE04G1893 Ceratophyllum demersum HOM05D004676 ORTHO05D005661 1.5e-06 56.2 40 72.5
FAN15G3467 Fragaria x ananassa HOM05D003862 ORTHO05D004398 4.5e-06 54.7 31 80.6


User provided reference genes

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