Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 2.7e-211 738.4 382 100.0
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 5.4e-151 538.1 382 73.3
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 2.5e-140 502.7 382 69.4
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 3.3e-140 502.3 382 67.5
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 6.5e-136 488.0 383 68.1
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 7.1e-135 484.6 382 66.5
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 6.1e-134 481.5 382 64.4
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 3.0e-133 479.2 381 65.1
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 5.7e-132 474.9 382 66.0
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 1.6e-131 473.4 381 64.6
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 1.4e-130 470.3 383 63.4
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 5.3e-130 468.4 382 64.9
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 3.4e-129 465.7 382 64.7
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.3e-128 463.8 382 65.2
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 2.2e-128 463.0 389 62.7
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 2.9e-128 462.6 382 62.6
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 3.8e-128 462.2 377 64.5
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 6.5e-128 461.5 389 63.5
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 1.1e-127 460.7 382 64.1
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 2.5e-127 459.5 389 62.2
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 6.1e-126 454.9 384 62.8
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 1.5e-124 450.3 382 63.1
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 7.4e-124 448.0 382 63.4
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 1.3e-123 447.2 383 63.2
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 1.7e-123 446.8 382 62.6
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 4.8e-123 445.3 389 62.0
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 2.4e-122 443.0 382 61.8
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 3.1e-122 442.6 395 60.0
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 5.3e-122 441.8 395 59.7
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 1.2e-121 440.7 403 58.1
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 3.4e-121 439.1 382 62.3
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 5.9e-121 438.3 383 62.4
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 7.7e-121 438.0 392 61.0
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.9e-119 433.3 406 58.1
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 2.5e-119 433.0 382 58.9
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 1.1e-116 424.1 385 58.7
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 2.0e-116 423.3 383 58.7
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 3.3e-116 422.5 393 58.0
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 1.3e-115 420.6 382 58.1
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 6.3e-115 418.3 323 66.9
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 8.2e-115 417.9 382 59.7
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 2.4e-114 416.4 383 60.6
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 2.0e-113 413.3 387 60.7
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 3.5e-113 412.5 383 59.0
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 5.9e-113 411.8 383 58.7
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 1.5e-111 407.1 383 57.4
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 1.9e-111 406.8 385 55.8
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 2.7e-110 402.9 450 52.4
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 1.1e-108 397.5 386 57.0
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 7.4e-108 394.8 382 55.2
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 2.2e-107 393.3 382 54.5
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 4.8e-107 392.1 382 56.5
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 1.1e-106 391.0 322 63.7
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 4.5e-105 385.6 382 53.7
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 1.7e-104 383.6 294 68.0
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 2.9e-104 382.9 324 62.3
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 3.2e-103 379.4 382 53.9
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 9.4e-103 377.9 394 54.3
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 1.2e-102 377.5 383 53.5
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 2.7e-102 376.3 386 53.9
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 3.0e-101 372.9 382 52.1
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 4.0e-101 372.5 383 52.5
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 4.0e-101 372.5 384 55.5
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 4.0e-101 372.5 385 53.0
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 6.8e-101 371.7 382 52.4
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 6.8e-101 371.7 384 51.8
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 8.8e-101 371.3 384 53.6
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 1.2e-100 370.9 384 53.1
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 1.5e-100 370.5 383 52.7
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 2.0e-100 370.2 383 52.7
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 2.6e-100 369.8 382 52.4
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 3.4e-100 369.4 383 52.5
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 2.4e-98 363.2 318 61.3
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 3.1e-98 362.8 408 50.0
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 2.7e-94 349.7 416 48.3
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 2.3e-93 346.7 384 50.0
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 2.0e-92 343.6 387 49.1
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 2.6e-92 343.2 387 49.9
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 3.4e-92 342.8 384 50.5
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 1.2e-89 334.3 391 49.4
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 3.3e-87 326.2 388 48.5
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 2.8e-86 323.2 288 60.1
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 6.1e-86 322.0 288 60.1
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 1.7e-83 313.9 490 43.3
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 2.9e-83 313.2 385 49.1
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 2.9e-83 313.2 308 56.2
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 1.0e-80 304.7 382 46.9
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 2.9e-80 303.1 382 45.0
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 6.6e-80 302.0 348 49.1
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 5.8e-76 288.9 216 67.1
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 9.8e-76 288.1 288 53.8
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 6.0e-73 278.9 201 69.7
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 6.0e-73 278.9 370 43.8
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 2.3e-72 276.9 308 49.0
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 4.3e-71 272.7 396 44.9
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 2.8e-70 270.0 387 43.2
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 1.7e-67 260.8 250 54.4
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 5.4e-66 255.8 288 49.0
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 9.5e-63 245.0 428 38.8
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 8.1e-46 188.7 263 41.8
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 1.2e-44 184.9 191 51.8
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 2.2e-43 180.6 389 35.7
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 1.6e-41 174.5 385 34.5
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 1.3e-40 171.4 359 32.9
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 4.3e-39 166.4 386 34.5
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 5.3e-37 159.5 405 30.9
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.6e-33 147.9 114 64.0
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 2.7e-33 147.1 296 36.8
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 4.0e-29 133.3 169 47.3
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 1.7e-27 127.9 119 60.5
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 6.5e-27 125.9 444 26.6
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 1.9e-23 114.4 131 50.4
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 2.2e-19 100.9 70 74.3
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 3.3e-15 87.0 96 51.0
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 4.5e-12 76.6 72 58.3
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 3.8e-11 73.6 239 30.1
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 8.8e-08 62.4 93 37.6
Glyma.10G191650 Glycine max HOM05D006045 ORTHO05D007678 2.5e-07 60.8 91 39.6
Thhalv10015964m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 3.7e-06 57.0 156 31.4
Medtr7g062690 Medicago truncatula HOM05D006045 ORTHO05D007678 6.3e-06 56.2 88 42.0


User provided reference genes

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