Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034046001 Vitis vinifera HOM05D005668 ORTHO05D007082 9.4e-161 570.1 279 100.0
Hma1.2p1_0671F.1_g200690 Hydrangea macrophylla HOM05D005668 ORTHO05D007082 3.9e-98 362.1 270 65.2
Actinidia13809 Actinidia chinensis HOM05D005668 ORTHO05D007082 5.1e-98 361.7 273 66.7
CSS0033766 Camellia sinensis var. sinensis HOM05D005668 ORTHO05D007082 5.6e-97 358.2 271 65.7
Actinidia29156 Actinidia chinensis HOM05D005668 ORTHO05D007082 2.1e-91 339.7 279 63.4
QL07p027771 Quercus lobata HOM05D005668 ORTHO05D007082 2.7e-91 339.3 261 63.2
Rhsim05G0201000 Rhododendron simsii HOM05D005668 ORTHO05D007082 2.5e-89 332.8 272 61.8
CiPaw.10G150900 Carya illinoinensis HOM05D005668 ORTHO05D007082 5.7e-89 331.6 262 61.8
Nn2g13550 Nelumbo nucifera HOM05D005668 ORTHO05D007082 2.1e-88 329.7 249 67.5
Dinv37103 Davidia involucrata HOM05D005668 ORTHO05D007082 8.2e-88 327.8 279 62.4
CiPaw.09G203400 Carya illinoinensis HOM05D005668 ORTHO05D007082 1.1e-87 327.4 262 60.7
Cc06_g01940 Coffea canephora HOM05D005668 ORTHO05D007082 1.4e-87 327.0 274 59.9
HanXRQChr10g0292601 Helianthus annuus HOM05D005668 ORTHO05D007082 3.1e-87 325.9 257 63.8
Manes.09G099500 Manihot esculenta HOM05D005668 ORTHO05D007082 3.1e-87 325.9 264 62.1
Lj3P959T33 Lonicera japonica HOM05D005668 ORTHO05D007082 4.1e-87 325.5 189 81.0
Haze_20910 Corylus avellana HOM05D005668 ORTHO05D007082 1.0e-85 320.9 261 63.2
MSTRG.5615 Avicennia marina HOM05D005668 ORTHO05D007082 3.8e-85 318.9 272 60.3
Thecc.05G026500 Theobroma cacao HOM05D005668 ORTHO05D007082 6.5e-85 318.2 262 61.1
Nitab4.5_0000119g0350 Nicotiana tabacum HOM05D005668 ORTHO05D007082 1.1e-84 317.4 199 74.4
Peaxi162Scf00014g01419 Petunia axillaris HOM05D005668 ORTHO05D007082 4.2e-84 315.5 181 79.0
PGSC0003DMG400019135 Solanum tuberosum HOM05D005668 ORTHO05D007082 4.2e-84 315.5 194 75.8
Cpa.g.sc56.75 Carica papaya HOM05D005668 ORTHO05D007082 5.5e-84 315.1 275 60.4
Solyc09g011730.4 Solanum lycopersicum HOM05D005668 ORTHO05D007082 9.3e-84 314.3 189 76.2
Sopen09g006550 Solanum pennellii HOM05D005668 ORTHO05D007082 9.3e-84 314.3 189 76.2
Potri.016G105600 Populus trichocarpa HOM05D005668 ORTHO05D007082 1.2e-83 313.9 263 60.5
PGSC0003DMG400020340 Solanum tuberosum HOM05D005668 ORTHO05D007082 1.6e-83 313.5 188 76.1
TAR633G1417 Trochodendron aralioides HOM05D005668 ORTHO05D007082 1.6e-83 313.5 189 79.4
TWI77G0370 Tripterygium wilfordii HOM05D005668 ORTHO05D007082 2.1e-83 313.2 262 60.7
ECA247G1252 Erigeron canadensis HOM05D005668 ORTHO05D007082 2.7e-83 312.8 255 61.2
CAN.G351.19 Capsicum annuum HOM05D005668 ORTHO05D007082 4.6e-83 312.0 195 74.9
Migut.J00254 Erythranthe guttata HOM05D005668 ORTHO05D007082 3.0e-82 309.3 179 81.6
Potri.006G093700 Populus trichocarpa HOM05D005668 ORTHO05D007082 8.7e-82 307.8 261 60.2
PSO384G2457 Papaver somniferum HOM05D005668 ORTHO05D007082 1.1e-81 307.4 240 64.2
CAN.G978.9 Capsicum annuum HOM05D005668 ORTHO05D007082 4.3e-81 305.4 181 76.2
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 1.3e-80 303.9 264 58.7
HanXRQChr06g0176661 Helianthus annuus HOM05D005668 ORTHO05D007082 3.7e-80 302.4 181 76.2
Duzib093G0236 Durio zibethinus HOM05D005668 ORTHO05D007082 4.8e-80 302.0 263 58.9
PSO339G5656 Papaver somniferum HOM05D005668 ORTHO05D007082 4.8e-80 302.0 180 76.7
Ciclev10012485m.g Citrus clementina HOM05D005668 ORTHO05D007082 1.8e-79 300.1 267 56.6
RcHm_v2.0_Chr3g0464311 Rosa chinensis HOM05D005668 ORTHO05D007082 5.3e-79 298.5 262 59.2
COL.COLO4_14664 Corchorus olitorius HOM05D005668 ORTHO05D007082 6.9e-79 298.1 256 60.5
EL10Ac7g17156 Beta vulgaris HOM05D005668 ORTHO05D007082 9.1e-79 297.7 261 57.9
Lsat_1_v5_gn_9_29260 Lactuca sativa HOM05D005668 ORTHO05D007082 2.6e-78 296.2 180 74.4
FAN09G2081 Fragaria x ananassa HOM05D005668 ORTHO05D007082 5.9e-78 295.0 262 57.6
CANSAT35G1374 Cannabis sativa HOM05D005668 ORTHO05D007082 1.0e-77 294.3 262 60.3
Prupe.6G267200 Prunus persica HOM05D005668 ORTHO05D007082 8.5e-77 291.2 235 63.0
FvH4_6g12490 Fragaria vesca HOM05D005668 ORTHO05D007082 1.9e-76 290.0 262 57.6
FAN02G1041 Fragaria x ananassa HOM05D005668 ORTHO05D007082 1.9e-76 290.0 262 57.3
Hund26016 Selenicereus undatus HOM05D005668 ORTHO05D007082 2.5e-76 289.7 216 63.0
Sabra06G0071200 Salix brachista HOM05D005668 ORTHO05D007082 4.2e-76 288.9 190 71.1
FAN14G5852 Fragaria x ananassa HOM05D005668 ORTHO05D007082 7.2e-76 288.1 260 57.3
MD04G1141800 Malus domestica HOM05D005668 ORTHO05D007082 7.2e-76 288.1 263 58.2
MBI14_g25115_MAGBIO Magnolia biondii HOM05D005668 ORTHO05D007082 9.4e-76 287.7 189 72.0
AUR62034588 Chenopodium quinoa HOM05D005668 ORTHO05D007082 2.1e-75 286.6 185 71.9
Atru.chr8.2154 Acer truncatum HOM05D005668 ORTHO05D007082 2.7e-75 286.2 257 59.1
MD12G1156400 Malus domestica HOM05D005668 ORTHO05D007082 3.6e-75 285.8 263 57.8
Gohir.A09G162000 Gossypium hirsutum HOM05D005668 ORTHO05D007082 4.6e-75 285.4 267 56.6
unitig_27.g24805 Utricularia gibba HOM05D005668 ORTHO05D007082 7.9e-75 284.6 194 68.6
Glyma.01G107100 Glycine max HOM05D005668 ORTHO05D007082 2.3e-74 283.1 257 57.6
Gorai.006G179300 Gossypium raimondii HOM05D005668 ORTHO05D007082 2.3e-74 283.1 266 54.9
AUR62036679 Chenopodium quinoa HOM05D005668 ORTHO05D007082 3.0e-74 282.7 184 71.7
DCAR_024047 Daucus carota HOM05D005668 ORTHO05D007082 2.0e-73 280.0 160 80.0
Glyma.03G073762 Glycine max HOM05D005668 ORTHO05D007082 2.6e-73 279.6 257 57.2
Aqoxy5G03828 Aquilegia oxysepala HOM05D005668 ORTHO05D007082 3.3e-73 279.3 196 68.4
Sc01g0004980 Simmondsia chinensis HOM05D005668 ORTHO05D007082 3.3e-73 279.3 268 56.0
Gohir.D09G157600 Gossypium hirsutum HOM05D005668 ORTHO05D007082 4.4e-73 278.9 179 72.1
Lalb_Chr07g0193171 Lupinus albus HOM05D005668 ORTHO05D007082 7.4e-73 278.1 264 54.2
SGA_v2.0_scaffold75G24983 Striga asiatica HOM05D005668 ORTHO05D007082 1.8e-71 273.5 176 71.0
FAN05G5175 Fragaria x ananassa HOM05D005668 ORTHO05D007082 5.3e-71 271.9 235 59.6
CDE04G3656 Ceratophyllum demersum HOM05D005668 ORTHO05D007082 9.1e-71 271.2 245 57.1
PGR044G0692 Punica granatum HOM05D005668 ORTHO05D007082 2.0e-70 270.0 249 55.0
arahy.Tifrunner.gnm1.ann1.J12K19 Arachis hypogaea HOM05D005668 ORTHO05D007082 2.6e-70 269.6 264 54.2
arahy.Tifrunner.gnm1.ann1.WQ4JXZ Arachis hypogaea HOM05D005668 ORTHO05D007082 3.4e-70 269.2 264 54.2
MELO3C009208.2 Cucumis melo HOM05D005668 ORTHO05D007082 5.9e-70 268.5 268 54.9
Carub.0003s0836 Capsella rubella HOM05D005668 ORTHO05D007082 7.7e-70 268.1 228 58.8
ClCG10G021640 Citrullus lanatus HOM05D005668 ORTHO05D007082 1.0e-69 267.7 188 68.6
CARHR083600 Cardamine hirsuta HOM05D005668 ORTHO05D007082 2.2e-69 266.5 228 60.1
Sed0009323 Sechium edule HOM05D005668 ORTHO05D007082 2.9e-69 266.2 262 53.1
AT3G09250 Arabidopsis thaliana HOM05D005668 ORTHO05D007082 6.5e-69 265.0 228 58.8
Thhalv10021409m.g Eutrema salsugineum HOM05D005668 ORTHO05D007082 6.5e-69 265.0 234 57.3
AL3G20360 Arabidopsis lyrata HOM05D005668 ORTHO05D007082 8.5e-69 264.6 228 58.3
Manes.07G057000 Manihot esculenta HOM05D005668 ORTHO05D007082 8.5e-69 264.6 183 67.8
Eucgr.F01481 Eucalyptus grandis HOM05D005668 ORTHO05D007082 1.1e-68 264.2 186 66.7
Ca_07382_v3 Cicer arietinum L. HOM05D005668 ORTHO05D007082 1.4e-68 263.8 257 52.5
CsaV3_3G034370 Cucumis sativus L. HOM05D005668 ORTHO05D007082 4.2e-68 262.3 262 54.6
BcaC09g48013 Brassica carinata HOM05D005668 ORTHO05D007082 5.5e-68 261.9 236 57.2
THA.LOC104823270 Tarenaya hassleriana HOM05D005668 ORTHO05D007082 2.1e-67 260.0 185 64.9
Gohir.A10G232501 Gossypium hirsutum HOM05D005668 ORTHO05D007082 2.7e-67 259.6 199 62.8
Gohir.D10G244900 Gossypium hirsutum HOM05D005668 ORTHO05D007082 2.7e-67 259.6 199 62.8
Sp3g07630 Schrenkiella parvula HOM05D005668 ORTHO05D007082 2.7e-67 259.6 182 67.6
Os02g0788500 Oryza sativa ssp. japonica HOM05D005668 ORTHO05D007082 3.6e-67 259.2 201 63.2
Phvul.006G070400 Phaseolus vulgaris HOM05D005668 ORTHO05D007082 6.1e-67 258.5 263 52.9
Aa31LG3G1740 Aethionema arabicum HOM05D005668 ORTHO05D007082 1.0e-66 257.7 226 58.4
BolC1t05468H Brassica oleracea HOM05D005668 ORTHO05D007082 6.7e-66 255.0 210 58.6
BcaC09g48059 Brassica carinata HOM05D005668 ORTHO05D007082 2.0e-65 253.4 210 59.0
Lj3g0016116 Lotus japonicus HOM05D005668 ORTHO05D007082 2.0e-65 253.4 257 51.4
VMungo0540G0241 Vigna mungo HOM05D005668 ORTHO05D007082 3.3e-65 252.7 248 50.0
BraA01t04309Z Brassica rapa HOM05D005668 ORTHO05D007082 4.4e-65 252.3 210 58.1
Os01g0753200 Oryza sativa ssp. japonica HOM05D005668 ORTHO05D007082 9.7e-65 251.1 186 61.8
SHI12750 Sapria himalayana HOM05D005668 ORTHO05D007082 1.4e-63 247.3 184 60.9
Medtr4g019910 Medicago truncatula HOM05D005668 ORTHO05D007082 1.8e-63 246.9 175 65.7
Nitab4.5_0000008g0300 Nicotiana tabacum HOM05D005668 ORTHO05D007082 7.7e-62 241.5 140 72.1
ATR0950G003 Amborella trichopoda HOM05D005668 ORTHO05D007082 5.2e-58 228.8 178 61.2
Gorai.011G282300 Gossypium raimondii HOM05D005668 ORTHO05D007082 8.8e-58 228.0 182 61.0
Phvul.006G070500 Phaseolus vulgaris HOM05D005668 ORTHO05D007082 1.2e-57 227.6 261 46.0
MBI14_g45810_MAGBIO Magnolia biondii HOM05D005668 ORTHO05D007082 4.4e-57 225.7 151 72.2
HPP92_006867 Vanilla planifolia HOM05D005668 ORTHO05D007082 3.7e-56 222.6 166 60.2
HPP92_006850 Vanilla planifolia HOM05D005668 ORTHO05D007082 4.8e-56 222.2 166 60.2
Zm00001eb257420 Zea mays HOM05D005668 ORTHO05D007082 7.0e-55 218.4 238 50.0
Psat7g240360 Pisum sativum HOM05D005668 ORTHO05D007082 2.7e-54 216.5 253 48.2
SEGI_35617 Sequoiadendron giganteum HOM05D005668 ORTHO05D007082 2.9e-53 213.0 170 54.1
Gohir.A10G229920 Gossypium hirsutum HOM05D005668 ORTHO05D007082 1.9e-52 210.3 182 57.7
BcaC01g04218 Brassica carinata HOM05D005668 ORTHO05D007082 2.5e-52 209.9 175 60.6
vmacro20204 Vaccinium macrocarpon HOM05D005668 ORTHO05D007082 2.2e-48 196.8 102 81.4
Oeu039148.1 Olea europaea HOM05D005668 ORTHO05D007082 1.8e-47 193.7 102 79.4
SMO143G0113 Selaginella moellendorffii HOM05D005668 ORTHO05D007082 6.1e-43 178.7 155 55.5
Dinv35535 Davidia involucrata HOM05D005668 ORTHO05D007082 8.8e-42 174.9 182 56.6
AagrBONN_evm.TU.Sc2ySwM_228.2951 Anthoceros agrestis HOM05D005668 ORTHO05D007082 1.8e-39 167.2 239 38.9
BcaB04g18542 Brassica carinata HOM05D005668 ORTHO05D007082 2.7e-38 163.3 103 68.9
C03p43750 Brassica napus HOM05D005668 ORTHO05D007082 6.6e-37 158.7 103 68.0
Nitab4.5_0010516g0020 Nicotiana tabacum HOM05D005668 ORTHO05D007082 3.7e-32 142.9 75 74.7
Nitab4.5_0002152g0020 Nicotiana tabacum HOM05D005668 ORTHO05D007082 1.1e-28 131.3 101 64.4
Psat3g035960 Pisum sativum HOM05D005668 ORTHO05D007082 1.1e-28 131.3 102 63.7
TPR.G2978 Trifolium pratense HOM05D005668 ORTHO05D007082 9.2e-23 111.7 156 45.5
arahy.Tifrunner.gnm1.ann1.2N10NB Arachis hypogaea HOM05D005668 ORTHO05D007082 1.2e-19 101.3 174 39.1
Atru.chr10.1066 Acer truncatum HOM05D005668 ORTHO05D007082 2.0e-17 94.0 126 51.6
BraA03t12781Z Brassica rapa HOM05D005668 ORTHO05D007082 9.9e-17 91.7 161 39.1
Mapoly0024s0042 Marchantia polymorpha HOM05D005144 ORTHO05D006112 2.9e-16 90.1 120 40.8
A03p36100 Brassica napus HOM05D005668 ORTHO05D007082 4.1e-15 86.3 76 56.6
Cre08.g375950 Chlamydomonas reinhardtii HOM05D005668 ORTHO05D007082 4.1e-15 86.3 133 35.3
SMO356G0181 Selaginella moellendorffii HOM05D005144 ORTHO05D006112 7.8e-14 82.0 120 37.5
AagrBONN_evm.TU.Sc2ySwM_362.2655 Anthoceros agrestis HOM05D005144 ORTHO05D006112 1.0e-13 81.6 120 39.2
MCO04G552 Micromonas commoda HOM05D005668 ORTHO05D007082 4.3e-12 76.3 100 41.0
MBI07_g40676_MAGBIO Magnolia biondii HOM05D005144 ORTHO05D006112 2.1e-11 73.9 117 34.2
Ah.12g052690 Amaranthus hybridus HOM05D005144 ORTHO05D006112 2.8e-11 73.6 117 31.6
Manes.01G052400 Manihot esculenta HOM05D005144 ORTHO05D006112 2.8e-11 73.6 117 31.6
Cpa.g.sc634.1 Carica papaya HOM05D005144 ORTHO05D006112 4.7e-11 72.8 120 32.5
SEGI_22496 Sequoiadendron giganteum HOM05D005144 ORTHO05D006112 8.1e-11 72.0 186 27.4
Potri.003G141600 Populus trichocarpa HOM05D005144 ORTHO05D006112 1.1e-10 71.6 117 31.6
AUR62010862 Chenopodium quinoa HOM05D005144 ORTHO05D006112 2.4e-10 70.5 117 29.9
AUR62019860 Chenopodium quinoa HOM05D002356 ORTHO05D006112 2.4e-10 70.5 117 29.9
Sabra03G0102000 Salix brachista HOM05D005144 ORTHO05D006112 2.4e-10 70.5 117 31.6
CAN.G567.13 Capsicum annuum HOM05D005144 ORTHO05D006112 4.0e-10 69.7 117 28.2
SEGI_08848 Sequoiadendron giganteum HOM05D005144 ORTHO05D006112 5.2e-10 69.3 119 31.1
Actinidia04180 Actinidia chinensis HOM05D005144 ORTHO05D006112 8.9e-10 68.6 117 31.6
Hma1.2p1_0440F.1_g153460 Hydrangea macrophylla HOM05D005144 ORTHO05D006112 8.9e-10 68.6 117 29.9
MSTRG.1800 Avicennia marina HOM05D005144 ORTHO05D006112 1.5e-09 67.8 119 28.6
GSVIVG01019559001 Vitis vinifera HOM05D005144 ORTHO05D006112 2.0e-09 67.4 117 29.1
Medtr8g099610 Medicago truncatula HOM05D005144 ORTHO05D006112 2.6e-09 67.0 117 30.8
BraA03t12780Z Brassica rapa HOM05D005668 ORTHO05D007082 4.4e-09 66.2 41 75.6
Hund14208 Selenicereus undatus HOM05D005144 ORTHO05D006112 7.6e-09 65.5 117 30.8
CSS0010562 Camellia sinensis var. sinensis HOM05D005144 ORTHO05D006112 9.9e-09 65.1 117 29.9
CSS0049427 Camellia sinensis var. sinensis HOM05D005144 ORTHO05D006112 9.9e-09 65.1 117 29.9
TPR.G339 Trifolium pratense HOM05D005668 ORTHO05D007082 1.7e-08 64.3 133 30.8
Lsat_1_v5_gn_6_8420 Lactuca sativa HOM05D005144 ORTHO05D006112 2.9e-08 63.5 119 26.9
CARHR255680 Cardamine hirsuta HOM05D005144 ORTHO05D006112 4.9e-08 62.8 117 27.4
Lsat_1_v5_gn_3_11240 Lactuca sativa HOM05D005144 ORTHO05D006112 1.9e-07 60.8 121 27.3
PRCOL_00006744 Prasinoderma coloniale HOM05D005668 ORTHO05D049035 7.1e-07 58.9 134 32.8
ECA246G4745 Erigeron canadensis HOM05D005144 ORTHO05D006112 3.5e-06 56.6 117 28.2
CARHR125070 Cardamine hirsuta HOM05D005144 ORTHO05D006112 4.6e-06 56.2 119 25.2


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