Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 1.3e-249 865.9 427 100.0
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 7.8e-207 723.8 430 82.8
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 5.1e-206 721.1 433 81.8
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 8.7e-206 720.3 429 81.8
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 8.7e-206 720.3 428 80.6
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 3.6e-204 714.9 429 81.8
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 4.9e-201 704.5 427 78.9
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 4.2e-200 701.4 427 81.0
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 5.4e-200 701.0 427 80.1
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 1.2e-199 699.9 427 79.9
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 1.6e-199 699.5 432 79.9
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 3.9e-198 694.9 430 80.5
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 1.1e-197 693.3 425 76.7
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 5.6e-197 691.0 432 79.2
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 1.6e-196 689.5 430 78.4
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 2.1e-196 689.1 427 79.2
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 3.1e-195 685.3 427 77.8
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 5.3e-195 684.5 427 76.1
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 9.0e-195 683.7 427 76.3
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 7.6e-194 680.6 428 78.7
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 9.9e-194 680.2 427 77.8
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.3e-193 679.9 427 78.2
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 1.7e-193 679.5 427 78.0
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.2e-193 679.1 427 77.8
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.1e-192 676.8 422 79.9
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 2.4e-192 675.6 427 77.5
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.2e-192 674.9 427 77.8
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.1e-191 672.5 427 75.4
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 3.9e-190 668.3 427 76.8
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 6.7e-190 667.5 431 74.7
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 1.5e-189 666.4 433 77.1
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 1.9e-189 666.0 428 77.6
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 2.5e-189 665.6 428 76.6
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 3.3e-189 665.2 427 74.9
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 6.2e-188 661.0 420 78.8
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 6.2e-188 661.0 429 75.1
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 1.1e-187 660.2 428 77.1
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 1.4e-187 659.8 429 75.3
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 2.0e-186 656.0 430 76.7
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 5.8e-186 654.4 428 75.7
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 1.3e-185 653.3 430 75.8
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 2.7e-183 645.6 427 74.7
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 3.5e-183 645.2 427 74.5
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 7.9e-183 644.0 427 73.8
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 1.0e-182 643.7 428 74.3
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 3.9e-182 641.7 429 76.2
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 4.3e-181 638.3 405 80.0
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 1.4e-179 633.3 427 72.4
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 3.1e-179 632.1 429 75.1
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.7e-177 626.3 433 72.1
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 6.5e-177 624.4 432 72.5
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 1.1e-176 623.6 432 72.2
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 1.1e-176 623.6 434 71.9
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 3.2e-176 622.1 453 71.1
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 4.2e-176 621.7 426 72.3
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 9.3e-176 620.5 432 72.2
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 2.7e-175 619.0 415 71.1
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 3.5e-175 618.6 435 72.6
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 6.0e-175 617.8 437 70.5
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 2.8e-172 609.0 415 70.1
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 4.1e-171 605.1 429 72.5
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 5.3e-171 604.7 427 70.0
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 6.9e-171 604.4 436 67.9
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 2.0e-170 602.8 429 69.9
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 4.5e-170 601.7 421 74.8
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 2.5e-168 595.9 351 82.3
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 1.0e-166 590.5 409 74.8
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.8e-166 589.7 432 67.6
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 4.1e-163 578.6 434 70.0
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 1.4e-160 570.1 396 72.5
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 2.5e-160 569.3 427 65.8
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 7.2e-160 567.8 383 75.2
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 1.5e-157 560.1 417 68.1
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.0e-157 559.7 329 81.5
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 3.1e-155 552.4 433 69.3
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 5.9e-154 548.1 460 62.2
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 8.5e-153 544.3 428 63.6
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 1.1e-152 543.9 410 69.8
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.4e-152 543.5 430 61.9
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 3.2e-152 542.3 427 63.2
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 5.5e-152 541.6 428 61.7
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 1.2e-151 540.4 428 60.7
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 2.1e-151 539.7 427 61.6
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 3.6e-151 538.9 428 60.7
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 3.6e-151 538.9 412 66.7
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 6.1e-151 538.1 428 61.7
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 3.0e-150 535.8 413 61.7
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 8.8e-150 534.3 423 62.9
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 1.3e-148 530.4 428 60.0
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 1.1e-147 527.3 427 60.2
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.1e-147 527.3 425 62.6
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 5.3e-147 525.0 416 60.8
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 1.3e-145 520.4 429 61.5
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 3.8e-145 518.8 415 63.9
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 4.2e-144 515.4 428 59.1
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 1.2e-143 513.8 409 63.8
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 4.4e-141 505.4 400 62.8
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 5.7e-141 505.0 405 62.5
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.6e-135 486.9 397 60.2
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 2.0e-130 469.9 329 70.2
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 2.0e-117 426.8 421 55.3
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 2.2e-116 423.3 263 78.3
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 2.3e-110 403.3 304 68.8
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 1.3e-100 370.9 404 46.8
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 9.5e-96 354.8 398 49.2
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 1.7e-92 344.0 414 45.9
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.1e-91 341.3 320 55.9
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 4.8e-87 325.9 218 68.3
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.4e-85 319.7 205 73.7
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 4.2e-83 312.8 388 44.6
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.4e-83 312.4 305 55.1
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.8e-63 246.1 166 69.3
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 1.4e-59 234.6 156 73.1
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 4.6e-58 229.6 135 77.0
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 2.4e-54 217.2 130 77.7
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 2.3e-49 200.7 123 77.2
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 5.7e-48 196.1 123 75.6
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.3e-44 184.9 223 43.0
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 5.7e-40 169.5 97 80.4
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 3.0e-33 147.1 82 86.6
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 2.4e-30 137.5 134 56.0
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 2.2e-28 131.0 124 59.7
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 4.0e-25 120.2 92 70.7
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.1e-19 102.1 95 60.0
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 8.6e-12 75.9 101 41.6
QL05p054729 Quercus lobata HOM05D006079 ORTHO05D338210 4.2e-11 73.6 60 65.0
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 2.9e-07 60.8 52 48.1


User provided reference genes

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