Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033954001 Vitis vinifera HOM05D004248 ORTHO05D004978 9.9e-144 513.5 263 100.0
Dinv31757 Davidia involucrata HOM05D004248 ORTHO05D004978 1.1e-126 456.8 261 87.4
Dinv05301 Davidia involucrata HOM05D004248 ORTHO05D004978 4.2e-126 454.9 261 87.4
Ciclev10011038m.g Citrus clementina HOM05D004248 ORTHO05D004978 2.5e-118 429.1 265 80.8
CSS0019025 Camellia sinensis var. sinensis HOM05D004248 ORTHO05D004978 5.1e-116 421.4 261 82.4
Atru.chr9.697 Acer truncatum HOM05D004248 ORTHO05D004978 3.3e-115 418.7 266 80.8
Hma1.2p1_0079F.1_g041850 Hydrangea macrophylla HOM05D004248 ORTHO05D004978 3.3e-115 418.7 259 83.4
Actinidia06045 Actinidia chinensis HOM05D004248 ORTHO05D004978 2.8e-114 415.6 260 81.2
Rhsim03G0064800 Rhododendron simsii HOM05D004248 ORTHO05D004978 8.2e-114 414.1 261 79.7
CiPaw.10G017100 Carya illinoinensis HOM05D004248 ORTHO05D004978 1.1e-113 413.7 262 79.4
QL07p036804 Quercus lobata HOM05D004248 ORTHO05D004978 6.9e-113 411.0 263 78.7
Cfa020026 Carpinus fangiana HOM05D004248 ORTHO05D004978 9.0e-113 410.6 261 80.1
Sabra06G0156800 Salix brachista HOM05D004248 ORTHO05D004978 3.4e-112 408.7 256 80.1
Manes.09G044700 Manihot esculenta HOM05D004248 ORTHO05D004978 1.1e-110 403.7 260 78.1
Manes.09G045100 Manihot esculenta HOM05D004248 ORTHO05D004978 2.5e-110 402.5 260 78.1
CsaV3_3G040150 Cucumis sativus L. HOM05D004248 ORTHO05D004978 4.2e-110 401.7 261 76.2
Cfa016679 Carpinus fangiana HOM05D004248 ORTHO05D004978 1.2e-109 400.2 261 77.8
Duzib093G0037 Durio zibethinus HOM05D004248 ORTHO05D004978 1.6e-109 399.8 261 75.9
Sopen01g003120 Solanum pennellii HOM05D004248 ORTHO05D004978 2.1e-109 399.4 255 78.8
CAN.G574.19 Capsicum annuum HOM05D004248 ORTHO05D004978 6.1e-109 397.9 255 78.8
RcHm_v2.0_Chr3g0475871 Rosa chinensis HOM05D004248 ORTHO05D004978 7.9e-109 397.5 261 76.6
ClCG10G016230 Citrullus lanatus HOM05D004248 ORTHO05D004978 1.0e-108 397.1 261 75.9
Solyc01g007140.3 Solanum lycopersicum HOM05D004248 ORTHO05D004978 1.3e-108 396.7 255 78.4
Oeu052620.1 Olea europaea HOM05D004248 ORTHO05D004978 1.8e-108 396.4 259 77.2
MD10G1053900 Malus domestica HOM05D004248 ORTHO05D004978 2.3e-108 396.0 261 76.2
Actinidia37744 Actinidia chinensis HOM05D004248 ORTHO05D004978 3.9e-108 395.2 296 70.9
vmacro07476 Vaccinium macrocarpon HOM05D004248 ORTHO05D004978 6.7e-108 394.4 259 76.4
MELO3C009754.2 Cucumis melo HOM05D004248 ORTHO05D004978 8.7e-108 394.0 276 72.5
Potri.011G095700 Populus trichocarpa HOM05D004248 ORTHO05D004978 2.5e-107 392.5 256 77.0
RcHm_v2.0_Chr1g0331061 Rosa chinensis HOM05D004248 ORTHO05D004978 2.5e-107 392.5 261 75.5
Haze_19699 Corylus avellana HOM05D004248 ORTHO05D004978 4.3e-107 391.7 261 78.2
Thecc.05G104000 Theobroma cacao HOM05D004248 ORTHO05D004978 5.7e-107 391.3 261 74.3
MSTRG.5896 Avicennia marina HOM05D004248 ORTHO05D004978 2.8e-106 389.0 262 74.0
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 3.7e-106 388.7 262 74.4
Gohir.A09G134400 Gossypium hirsutum HOM05D004248 ORTHO05D004978 3.7e-106 388.7 261 73.9
HanXRQChr17g0549301 Helianthus annuus HOM05D004248 ORTHO05D004978 3.7e-106 388.7 262 73.7
Nn4g22932 Nelumbo nucifera HOM05D004248 ORTHO05D004978 6.3e-106 387.9 259 77.2
Potri.001G208900 Populus trichocarpa HOM05D004248 ORTHO05D004978 8.2e-106 387.5 256 76.2
FAN05G1094 Fragaria x ananassa HOM05D004248 ORTHO05D004978 1.1e-105 387.1 262 75.2
Gorai.006G149600 Gossypium raimondii HOM05D004248 ORTHO05D004978 1.1e-105 387.1 261 73.6
Nitab4.5_0000020g0020 Nicotiana tabacum HOM05D004248 ORTHO05D004978 1.8e-105 386.3 240 80.8
Gohir.D09G130900 Gossypium hirsutum HOM05D004248 ORTHO05D004978 2.4e-105 386.0 261 73.2
FAN05G4951 Fragaria x ananassa HOM05D004248 ORTHO05D004978 5.3e-105 384.8 262 74.8
FAN14G1070 Fragaria x ananassa HOM05D004248 ORTHO05D004978 5.3e-105 384.8 262 74.8
Eucgr.E01507 Eucalyptus grandis HOM05D004248 ORTHO05D004978 6.9e-105 384.4 261 73.6
Lsat_1_v5_gn_3_1160 Lactuca sativa HOM05D004248 ORTHO05D004978 9.1e-105 384.0 258 75.2
FAN09G3200 Fragaria x ananassa HOM05D004248 ORTHO05D004978 1.5e-104 383.3 262 74.4
Prupe.7G095000 Prunus persica HOM05D004248 ORTHO05D004978 1.5e-104 383.3 254 77.2
ECA247G2914 Erigeron canadensis HOM05D004248 ORTHO05D004978 3.8e-103 378.6 265 71.7
DCAR_020706 Daucus carota HOM05D004248 ORTHO05D004978 8.5e-103 377.5 262 72.5
Oeu036626.1 Olea europaea HOM05D004248 ORTHO05D004978 1.9e-102 376.3 244 77.9
Sc22g0002860 Simmondsia chinensis HOM05D004248 ORTHO05D004978 1.2e-101 373.6 261 72.8
MD12G1040000 Malus domestica HOM05D004248 ORTHO05D004978 1.6e-101 373.2 236 78.8
Sed0013531 Sechium edule HOM05D004248 ORTHO05D004978 2.7e-101 372.5 261 71.3
SGA_v2.0_scaffold13G06632 Striga asiatica HOM05D004248 ORTHO05D004978 1.0e-100 370.5 290 66.6
Nitab4.5_0002858g0080 Nicotiana tabacum HOM05D004248 ORTHO05D004978 8.8e-100 367.5 265 72.1
THA.LOC104809952 Tarenaya hassleriana HOM05D004248 ORTHO05D004978 8.8e-100 367.5 258 71.3
EL10Ac5g12964 Beta vulgaris HOM05D004248 ORTHO05D004978 1.5e-99 366.7 261 72.0
FAN02G0498 Fragaria x ananassa HOM05D004248 ORTHO05D004978 1.5e-99 366.7 279 69.2
arahy.Tifrunner.gnm1.ann1.ZDQ0NF Arachis hypogaea HOM05D004248 ORTHO05D004978 1.3e-98 363.6 261 69.3
Lj1g0019866 Lotus japonicus HOM05D004248 ORTHO05D004978 1.3e-98 363.6 262 70.6
Glyma.07G150100 Glycine max HOM05D004248 ORTHO05D004978 2.4e-97 359.4 262 69.1
Glyma.16G099100 Glycine max HOM05D004248 ORTHO05D004978 4.1e-97 358.6 262 68.7
PSO017G5751 Papaver somniferum HOM05D004248 ORTHO05D004978 6.9e-97 357.8 255 71.0
arahy.Tifrunner.gnm1.ann1.2W33L2 Arachis hypogaea HOM05D004248 ORTHO05D004978 2.6e-96 355.9 261 68.6
HanXRQChr06g0164371 Helianthus annuus HOM05D004248 ORTHO05D004978 3.4e-96 355.5 303 62.4
Carub.0006s0524 Capsella rubella HOM05D004248 ORTHO05D004978 1.3e-95 353.6 254 68.1
Lalb_Chr20g0111391 Lupinus albus HOM05D004248 ORTHO05D004978 1.7e-95 353.2 255 69.4
PSO478G2311 Papaver somniferum HOM05D004248 ORTHO05D004978 9.4e-94 347.4 258 70.2
Aqoxy3G00875 Aquilegia oxysepala HOM05D004248 ORTHO05D004978 1.2e-93 347.1 261 69.0
Phvul.008G104000 Phaseolus vulgaris HOM05D004248 ORTHO05D004978 1.6e-93 346.7 262 67.9
AUR62030747 Chenopodium quinoa HOM05D004248 ORTHO05D004978 1.8e-92 343.2 261 67.4
Migut.J00705 Erythranthe guttata HOM05D004248 ORTHO05D004978 1.8e-92 343.2 252 69.8
AUR62036385 Chenopodium quinoa HOM05D004248 ORTHO05D004978 2.3e-92 342.8 261 68.2
AL6G16420 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 3.0e-92 342.4 236 71.2
AT5G06350 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 1.5e-91 340.1 258 66.3
Medtr7g106190 Medicago truncatula HOM05D004248 ORTHO05D004978 1.5e-91 340.1 255 70.2
Psat3g029120 Pisum sativum HOM05D004248 ORTHO05D004978 2.0e-91 339.7 255 69.8
Sp6g36500 Schrenkiella parvula HOM05D004248 ORTHO05D004978 2.0e-91 339.7 258 65.5
VMungo0647G1936 Vigna mungo HOM05D004248 ORTHO05D004978 7.4e-91 337.8 262 65.3
CANSAT01G1742 Cannabis sativa HOM05D004248 ORTHO05D004978 9.7e-91 337.4 261 65.9
CDE05G1117 Ceratophyllum demersum HOM05D004248 ORTHO05D004978 3.7e-90 335.5 262 64.9
Ca_09055_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 1.1e-89 334.0 255 69.0
Sabra01G0161200 Salix brachista HOM05D004248 ORTHO05D004978 9.1e-89 330.9 265 64.5
Thhalv10012647m.g Eutrema salsugineum HOM05D004248 ORTHO05D004978 1.2e-88 330.5 258 65.9
Aa31sc52G180 Aethionema arabicum HOM05D004248 ORTHO05D004978 4.5e-88 328.6 279 62.4
A10p30020 Brassica napus HOM05D004248 ORTHO05D004978 3.2e-86 322.4 260 63.1
BraA10t45042Z Brassica rapa HOM05D004248 ORTHO05D004978 3.2e-86 322.4 260 63.1
BcaC06g32369 Brassica carinata HOM05D004248 ORTHO05D004978 5.5e-86 321.6 260 62.7
C09p70430 Brassica napus HOM05D004248 ORTHO05D004978 5.5e-86 321.6 260 62.7
BolC9t59789H Brassica oleracea HOM05D004248 ORTHO05D004978 5.5e-86 321.6 260 62.7
Ca_26380_v3 Cicer arietinum L. HOM05D004248 ORTHO05D004978 7.2e-86 321.2 255 65.9
Peaxi162Scf00586g00027 Petunia axillaris HOM05D004248 ORTHO05D004978 9.4e-86 320.9 212 75.0
CARHR207090 Cardamine hirsuta HOM05D004248 ORTHO05D004978 3.6e-85 318.9 260 61.2
Cc06_g06540 Coffea canephora HOM05D004248 ORTHO05D004978 6.1e-85 318.2 192 83.3
PGR004G2794 Punica granatum HOM05D004248 ORTHO05D004978 1.4e-84 317.0 260 63.8
Haze_20188 Corylus avellana HOM05D004248 ORTHO05D004978 2.3e-84 316.2 196 82.1
PGR044G2629 Punica granatum HOM05D004248 ORTHO05D004978 3.0e-84 315.8 254 64.2
BcaNung06319 Brassica carinata HOM05D004248 ORTHO05D004978 2.6e-83 312.8 260 61.9
FvH4_6g20280 Fragaria vesca HOM05D004248 ORTHO05D004978 2.6e-83 312.8 215 72.1
HPP92_005875 Vanilla planifolia HOM05D004248 ORTHO05D004978 2.2e-82 309.7 258 60.9
Cpa.g.sc104.34 Carica papaya HOM05D004248 ORTHO05D004978 3.7e-82 308.9 193 80.8
AL6G38940 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 1.1e-81 307.4 270 58.1
SHI44568 Sapria himalayana HOM05D004248 ORTHO05D004978 2.7e-77 292.7 201 69.2
Glyma.16G096800 Glycine max HOM05D004248 ORTHO05D004978 1.7e-74 283.5 193 73.1
AT5G27010 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 2.2e-74 283.1 259 59.1
Hund14947 Selenicereus undatus HOM05D004248 ORTHO05D004978 2.9e-71 272.7 261 56.7
BcaB02g11156 Brassica carinata HOM05D004248 ORTHO05D004978 1.5e-67 260.4 260 54.6
Os04g0466700 Oryza sativa ssp. japonica HOM05D004248 ORTHO05D004978 1.7e-66 256.9 248 53.2
AL4G19610 Arabidopsis lyrata HOM05D004248 ORTHO05D004978 1.1e-65 254.2 260 53.5
TPR.G35565 Trifolium pratense HOM05D004248 ORTHO05D004978 1.4e-65 253.8 262 55.0
ATR0684G083 Amborella trichopoda HOM05D004248 ORTHO05D004978 6.1e-61 238.4 260 53.8
BcaB02g11160 Brassica carinata HOM05D004248 ORTHO05D004978 1.8e-60 236.9 243 52.7
unitig_8.g3983 Utricularia gibba HOM05D004248 ORTHO05D004978 7.5e-59 231.5 190 63.2
MBI13_g30331_MAGBIO Magnolia biondii HOM05D004248 ORTHO05D004978 1.3e-55 220.7 143 81.1
Pp3c26_11250 Physcomitrium patens HOM05D004248 ORTHO05D004978 1.2e-51 207.6 214 49.5
Pp3c26_11260 Physcomitrium patens HOM05D004248 ORTHO05D004978 1.2e-51 207.6 214 49.5
AagrBONN_evm.TU.Sc2ySwM_344.4227 Anthoceros agrestis HOM05D004248 ORTHO05D004978 8.3e-50 201.4 233 46.8
HanXRQChr01g0006711 Helianthus annuus HOM05D004248 ORTHO05D004978 6.8e-44 181.8 143 67.8
Atru.chr8.1370 Acer truncatum HOM05D004248 ORTHO05D004978 9.9e-43 177.9 111 78.4
Mapoly0023s0084 Marchantia polymorpha HOM05D004248 ORTHO05D004978 1.9e-41 173.7 265 36.6
RcHm_v2.0_Chr1g0331091 Rosa chinensis HOM05D004248 ORTHO05D004978 2.4e-41 173.3 108 75.9
TWI74G1036 Tripterygium wilfordii HOM05D004248 ORTHO05D004978 4.6e-40 169.1 111 74.8
AT4G04680 Arabidopsis thaliana HOM05D004248 ORTHO05D004978 5.1e-39 165.6 164 51.2
Cre10.g442250 Chlamydomonas reinhardtii HOM05D004248 ORTHO05D004978 2.4e-36 156.8 224 41.1
MBI13_g30330_MAGBIO Magnolia biondii HOM05D004248 ORTHO05D003073 4.4e-35 152.5 121 59.5
Cpa.g.c47797 Carica papaya HOM05D004248 ORTHO05D004978 1.0e-31 141.4 84 86.9
Psat3g179800 Pisum sativum HOM05D004248 ORTHO05D004978 8.1e-29 131.7 97 67.0
Psat3g179840 Pisum sativum HOM05D004248 ORTHO05D004978 6.9e-28 128.6 96 66.7
PGR004G1886 Punica granatum HOM05D004248 ORTHO05D004978 5.8e-27 125.6 118 55.1
Psat5g276400 Pisum sativum HOM05D004248 ORTHO05D004978 8.4e-26 121.7 97 72.2
SMO114G0040 Selaginella moellendorffii HOM05D004248 ORTHO05D004978 2.3e-23 113.6 224 33.5
SEGI_27247 Sequoiadendron giganteum HOM05D004248 ORTHO05D004978 6.6e-23 112.1 110 54.5
PRCOL_00003825 Prasinoderma coloniale HOM05D004248 ORTHO05D004978 2.1e-21 107.1 186 36.0
MCO15G695 Micromonas commoda HOM05D004248 ORTHO05D004978 4.0e-20 102.8 228 30.7
RcHm_v2.0_Chr1g0331071 Rosa chinensis HOM05D004248 ORTHO05D004978 2.2e-18 97.1 70 67.1
Medtr5g027350 Medicago truncatula HOM05D004248 ORTHO05D004978 6.4e-18 95.5 171 35.7
Ah.01g014630 Amaranthus hybridus HOM05D004248 ORTHO05D004978 1.2e-11 74.7 70 57.1
TPR.G597 Trifolium pratense HOM05D004248 ORTHO05D004978 2.0e-11 73.9 50 70.0
Zm00001eb080310 Zea mays HOM05D004248 ORTHO05D004978 2.0e-11 73.9 76 46.1


User provided reference genes

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