Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033880001 Vitis vinifera HOM05D007235 ORTHO05D008985 0.0e+00 2835.1 1360 100.0
Lsat_1_v5_gn_9_21080 Lactuca sativa HOM05D007235 ORTHO05D008985 0.0e+00 1617.4 1703 50.8
Dinv31713 Davidia involucrata HOM05D007235 ORTHO05D008985 0.0e+00 1278.1 827 74.1
TAR623G1371 Trochodendron aralioides HOM05D007235 ORTHO05D008985 0.0e+00 1276.5 851 71.9
Dinv31712 Davidia involucrata HOM05D007235 ORTHO05D008985 0.0e+00 1268.1 827 73.8
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 0.0e+00 1204.9 834 68.7
Cfa016637 Carpinus fangiana HOM05D007235 ORTHO05D008985 0.0e+00 1198.7 839 69.5
Prupe.7G102400 Prunus persica HOM05D007235 ORTHO05D008985 0.0e+00 1198.7 843 69.5
Rhsim03G0070500 Rhododendron simsii HOM05D007235 ORTHO05D008985 0.0e+00 1196.8 845 67.5
Ciclev10011029m.g Citrus clementina HOM05D007235 ORTHO05D008985 0.0e+00 1191.8 840 68.5
FvH4_6g19350 Fragaria vesca HOM05D007235 ORTHO05D008985 0.0e+00 1181.0 827 68.6
MD12G1029200 Malus domestica HOM05D007235 ORTHO05D008985 0.0e+00 1179.5 843 68.3
FAN14G5756 Fragaria x ananassa HOM05D007235 ORTHO05D008985 0.0e+00 1179.1 827 68.4
QL07p038338 Quercus lobata HOM05D007235 ORTHO05D008985 0.0e+00 1178.7 840 66.7
FAN02G2734 Fragaria x ananassa HOM05D007235 ORTHO05D008985 0.0e+00 1176.8 828 68.6
Manes.09G053100 Manihot esculenta HOM05D007235 ORTHO05D008985 0.0e+00 1174.8 843 67.0
CiPaw.10G011900 Carya illinoinensis HOM05D007235 ORTHO05D008985 0.0e+00 1171.4 830 67.8
Lj2C141T11 Lonicera japonica HOM05D007235 ORTHO05D008985 0.0e+00 1154.8 825 67.0
CSS0010120 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 0.0e+00 1152.5 840 66.5
CSS0040083 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 0.0e+00 1151.0 840 66.5
FvH4_6g19352 Fragaria vesca HOM05D007235 ORTHO05D008985 0.0e+00 1151.0 842 66.4
CSS0012377 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 0.0e+00 1150.6 840 66.5
Atru.chr8.1458 Acer truncatum HOM05D007235 ORTHO05D008985 0.0e+00 1145.6 825 67.3
FAN14G3457 Fragaria x ananassa HOM05D007235 ORTHO05D008985 0.0e+00 1140.9 842 66.0
Potri.006G210325 Populus trichocarpa HOM05D007235 ORTHO05D008985 0.0e+00 1135.2 820 66.1
Duzib106G1334 Durio zibethinus HOM05D007235 ORTHO05D008985 0.0e+00 1129.4 843 65.4
Potri.006G210150 Populus trichocarpa HOM05D007235 ORTHO05D008985 0.0e+00 1127.9 805 66.8
Actinidia05406 Actinidia chinensis HOM05D007235 ORTHO05D008985 0.0e+00 1127.5 836 65.3
Duzib093G1209 Durio zibethinus HOM05D007235 ORTHO05D008985 0.0e+00 1117.4 842 65.3
Prupe.8G215200 Prunus persica HOM05D007235 ORTHO05D008985 0.0e+00 1111.7 862 65.7
Gorai.002G238500 Gossypium raimondii HOM05D007235 ORTHO05D008985 0.0e+00 1110.1 826 65.3
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 0.0e+00 1109.0 818 67.2
MD10G1176100 Malus domestica HOM05D007235 ORTHO05D008985 0.0e+00 1107.8 858 65.2
Aqoxy2G01076 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 0.0e+00 1105.9 852 62.4
PSO339G1765 Papaver somniferum HOM05D007235 ORTHO05D008985 0.0e+00 1101.7 783 67.3
Aqoxy2G01105 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 0.0e+00 1090.5 855 62.1
PSO801G0111 Papaver somniferum HOM05D007235 ORTHO05D008985 0.0e+00 1077.8 848 62.5
TWI74G0874 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 0.0e+00 1076.6 844 63.0
Gohir.A01G204950 Gossypium hirsutum HOM05D007235 ORTHO05D008985 6.5e-311 1071.2 826 63.3
Sabra06G0161900 Salix brachista HOM05D007235 ORTHO05D008985 2.0e-309 1066.2 822 62.8
TWI74G1128 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 2.7e-309 1065.8 838 62.5
ClCG04G010150 Citrullus lanatus HOM05D007235 ORTHO05D008985 7.8e-309 1064.3 843 61.7
Sed0026179 Sechium edule HOM05D007235 ORTHO05D008985 1.1e-307 1060.4 843 61.3
RcHm_v2.0_Chr3g0474611 Rosa chinensis HOM05D007235 ORTHO05D008985 1.9e-307 1059.7 780 65.9
FAN02G0370 Fragaria x ananassa HOM05D007235 ORTHO05D008985 4.0e-305 1052.0 842 62.8
CsaV3_6G040770 Cucumis sativus L. HOM05D007235 ORTHO05D008985 5.8e-304 1048.1 839 60.3
Cc06_g21800 Coffea canephora HOM05D007235 ORTHO05D008985 1.7e-303 1046.6 833 62.8
Rhsim03G0070400 Rhododendron simsii HOM05D007235 ORTHO05D008985 2.2e-303 1046.2 821 63.3
PSO801G0535 Papaver somniferum HOM05D007235 ORTHO05D008985 1.9e-302 1043.1 842 61.5
RcHm_v2.0_Chr3g0474651 Rosa chinensis HOM05D007235 ORTHO05D008985 1.9e-302 1043.1 780 65.1
MELO3C024556.2 Cucumis melo HOM05D007235 ORTHO05D008985 5.4e-302 1041.6 822 60.9
SalBow3G3787 Salvia bowleyana HOM05D007235 ORTHO05D008985 5.6e-299 1031.6 842 61.2
Gohir.D01G194350 Gossypium hirsutum HOM05D007235 ORTHO05D008985 5.1e-292 1008.4 743 65.7
Migut.J01009 Erythranthe guttata HOM05D007235 ORTHO05D008985 5.1e-284 981.9 841 57.2
ATR0820G239 Amborella trichopoda HOM05D007235 ORTHO05D008985 9.6e-283 977.6 793 60.3
Cc06_g21890 Coffea canephora HOM05D007235 ORTHO05D008985 1.1e-281 974.2 770 63.0
SalBow3G1230 Salvia bowleyana HOM05D007235 ORTHO05D008985 2.2e-279 966.5 843 57.8
HPP92_006812 Vanilla planifolia HOM05D007235 ORTHO05D008985 2.4e-278 963.0 835 56.9
DCAR_007760 Daucus carota HOM05D007235 ORTHO05D008985 3.0e-276 956.1 841 57.2
DCAR_013408 Daucus carota HOM05D007235 ORTHO05D008985 9.0e-273 944.5 825 56.2
Migut.J01008 Erythranthe guttata HOM05D007235 ORTHO05D008985 1.2e-272 944.1 828 57.5
MBI17_g35889_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 1.9e-267 926.8 860 55.0
SEGI_15434 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 2.5e-251 873.2 881 51.1
MBI17_g41037_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 5.0e-239 832.4 680 62.4
Atru.chr8.1456 Acer truncatum HOM05D007235 ORTHO05D008985 1.1e-209 734.9 516 68.0
TAR623G0688 Trochodendron aralioides HOM05D007235 ORTHO05D008985 1.1e-209 734.9 480 72.5
SEGI_22450 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 1.2e-203 714.9 858 44.9
Lj7C625T8 Lonicera japonica HOM05D007235 ORTHO05D008985 6.4e-194 682.6 536 61.0
AagrBONN_evm.TU.Sc2ySwM_228.2009 Anthoceros agrestis HOM05D007235 ORTHO05D008985 1.2e-189 668.3 815 43.2
Mapoly0090s0057 Marchantia polymorpha HOM05D007235 ORTHO05D008985 6.6e-175 619.4 892 39.6
Aqoxy2G01078 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 1.4e-169 601.7 452 64.2
Haze_19643 Corylus avellana HOM05D007235 ORTHO05D008985 1.4e-169 601.7 509 62.1
Hma1.2p1_0769F.1_g215770 Hydrangea macrophylla HOM05D007235 ORTHO05D008985 2.1e-160 571.2 445 62.9
QL07p038322 Quercus lobata HOM05D007235 ORTHO05D008985 4.2e-137 493.8 350 67.7
Aqoxy2G01077 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 7.4e-134 483.0 381 61.9
Lj7A625G73 Lonicera japonica HOM05D007235 ORTHO05D008985 5.3e-124 450.3 284 75.4
MBI17_g48244_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 5.2e-111 407.1 353 57.5
COL.COLO4_29681 Corchorus olitorius HOM05D007235 ORTHO05D008985 1.8e-108 398.7 315 61.9
Haze_19644 Corylus avellana HOM05D007235 ORTHO05D008985 8.0e-104 383.3 281 67.6
Atru.chr8.1457 Acer truncatum HOM05D007235 ORTHO05D008985 1.8e-103 382.1 283 67.8
COL.COLO4_29683 Corchorus olitorius HOM05D007235 ORTHO05D008985 1.2e-102 379.4 329 56.8
QL07p038324 Quercus lobata HOM05D007235 ORTHO05D008985 5.7e-94 350.5 238 69.7
RcHm_v2.0_Chr3g0474591 Rosa chinensis HOM05D007235 ORTHO05D008985 8.0e-88 330.1 218 71.6
COL.COLO4_29682 Corchorus olitorius HOM05D007235 ORTHO05D008985 6.4e-85 320.5 216 72.2
Cfa021070 Carpinus fangiana HOM05D007235 ORTHO05D008985 1.7e-82 312.4 206 73.8
MBI17_g48245_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 3.3e-65 255.0 186 67.2
COL.COLO4_29684 Corchorus olitorius HOM05D002712 ORTHO05D007713 7.1e-52 210.7 140 73.6
MBI17_g41038_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 7.4e-33 147.5 93 68.8
Cfa009503 Carpinus fangiana HOM05D007235 ORTHO05D008985 3.4e-22 112.1 645 23.3
PSO339G2372 Papaver somniferum HOM05D007235 ORTHO05D008985 1.6e-19 103.2 78 61.5
MD14G1029500 Malus domestica HOM05D007235 ORTHO05D008985 3.0e-18 99.0 61 78.7
Lj3g0018874 Lotus japonicus HOM05D001324 ORTHO05D001220 2.6e-06 59.3 76 40.8
Nitab4.5_0003295g0020 Nicotiana tabacum HOM05D001324 ORTHO05D001220 2.6e-06 59.3 75 36.0
Lalb_Chr03g0030061 Lupinus albus HOM05D001324 ORTHO05D001220 3.4e-06 58.9 72 38.9
Sed0013034 Sechium edule HOM05D001324 ORTHO05D001220 3.4e-06 58.9 95 35.8
CAN.G1251.9 Capsicum annuum HOM05D001324 ORTHO05D001220 4.5e-06 58.5 73 37.0
CARHR003340 Cardamine hirsuta HOM05D001324 ORTHO05D001220 4.5e-06 58.5 103 32.0
MELO3C006405.2 Cucumis melo HOM05D001324 ORTHO05D001220 4.5e-06 58.5 83 37.3
Thhalv10024496m.g Eutrema salsugineum HOM05D001324 ORTHO05D001220 5.9e-06 58.2 94 33.0
Psat7g162840 Pisum sativum HOM05D001324 ORTHO05D001220 5.9e-06 58.2 78 38.5
Rhsim13G0037900 Rhododendron simsii HOM05D001324 ORTHO05D001220 5.9e-06 58.2 79 34.2
Medtr4g080890 Medicago truncatula HOM05D001324 ORTHO05D001220 7.7e-06 57.8 78 38.5
Oeu064642.2 Olea europaea HOM05D001324 ORTHO05D001220 7.7e-06 57.8 75 34.7


User provided reference genes

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