Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033751001 Vitis vinifera HOM05D001312 ORTHO05D008018 1.5e-228 795.8 397 100.0
CSS0027895 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 9.0e-173 610.5 382 77.7
CSS0009438 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 2.6e-172 609.0 382 77.7
Rhsim03G0083100 Rhododendron simsii HOM05D001312 ORTHO05D008018 3.2e-170 602.1 385 76.4
vmacro07336 Vaccinium macrocarpon HOM05D001312 ORTHO05D008018 1.3e-168 596.7 385 75.6
RcHm_v2.0_Chr3g0471781 Rosa chinensis HOM05D001312 ORTHO05D008018 9.6e-167 590.5 385 73.5
Dinv35859 Davidia involucrata HOM05D001312 ORTHO05D008018 2.8e-166 589.0 362 78.2
TAR633G1314 Trochodendron aralioides HOM05D001312 ORTHO05D001832 6.2e-166 587.8 385 74.0
Actinidia39872 Actinidia chinensis HOM05D001312 ORTHO05D008018 3.8e-163 578.6 384 73.7
FvH4_6g17520 Fragaria vesca HOM05D001312 ORTHO05D008018 4.2e-162 575.1 385 72.7
Thecc.05G079000 Theobroma cacao HOM05D001312 ORTHO05D008018 7.1e-162 574.3 385 71.9
CiPaw.10G004200 Carya illinoinensis HOM05D001312 ORTHO05D008018 1.6e-161 573.2 382 73.0
Potri.016G095900 Populus trichocarpa HOM05D001312 ORTHO05D008018 6.0e-161 571.2 385 71.7
MD14G1093900 Malus domestica HOM05D001312 ORTHO05D008018 7.9e-161 570.9 387 71.6
CANSAT80G2114 Cannabis sativa HOM05D001312 ORTHO05D008018 3.3e-159 565.5 385 71.4
FAN05G0775 Fragaria x ananassa HOM05D001312 ORTHO05D008018 9.6e-159 563.9 394 70.6
FAN05G3053 Fragaria x ananassa HOM05D001312 ORTHO05D008018 9.6e-159 563.9 394 70.6
CsaV3_6G040350 Cucumis sativus L. HOM05D001312 ORTHO05D008018 6.2e-158 561.2 385 68.6
Manes.08G018900 Manihot esculenta HOM05D001312 ORTHO05D008018 6.2e-158 561.2 384 71.6
FAN14G3191 Fragaria x ananassa HOM05D001312 ORTHO05D008018 4.0e-157 558.5 411 67.9
Lj3A1005G38 Lonicera japonica HOM05D001312 ORTHO05D008018 9.0e-157 557.4 393 69.5
MSTRG.5801 Avicennia marina HOM05D001312 ORTHO05D008018 1.5e-156 556.6 385 68.8
MELO3C024510.2 Cucumis melo HOM05D001312 ORTHO05D008018 2.6e-156 555.8 385 68.3
ClCG04G009690 Citrullus lanatus HOM05D001312 ORTHO05D008018 5.8e-156 554.7 384 69.0
arahy.Tifrunner.gnm1.ann1.42C0B0 Arachis hypogaea HOM05D001312 ORTHO05D008018 1.3e-155 553.5 382 69.6
arahy.Tifrunner.gnm1.ann1.C1UQYX Arachis hypogaea HOM05D001312 ORTHO05D008018 1.3e-155 553.5 382 69.6
Sed0012062 Sechium edule HOM05D001312 ORTHO05D008018 8.4e-155 550.8 385 67.5
TWI53G1380 Tripterygium wilfordii HOM05D001312 ORTHO05D008018 3.2e-154 548.9 381 69.3
Gohir.D04G105500 Gossypium hirsutum HOM05D001312 ORTHO05D008018 5.5e-154 548.1 382 69.9
Gorai.009G409200 Gossypium raimondii HOM05D001312 ORTHO05D008018 1.2e-153 547.0 382 69.9
Cpa.g.sc5.99 Carica papaya HOM05D001312 ORTHO05D008018 1.6e-153 546.6 384 70.3
Phvul.007G224100 Phaseolus vulgaris HOM05D001312 ORTHO05D008018 2.1e-153 546.2 382 69.9
PGSC0003DMG400028176 Solanum tuberosum HOM05D001312 ORTHO05D008018 2.7e-153 545.8 385 67.8
Eucgr.A01566 Eucalyptus grandis HOM05D001312 ORTHO05D008018 1.0e-152 543.9 378 70.1
COL.COLO4_22294 Corchorus olitorius HOM05D001312 ORTHO05D008018 2.3e-152 542.7 388 69.3
Sc02g0001220 Simmondsia chinensis HOM05D001312 ORTHO05D008018 5.1e-152 541.6 382 68.1
Lj5g0006635 Lotus japonicus HOM05D001312 ORTHO05D008018 6.7e-152 541.2 384 68.5
Aqoxy1G00967 Aquilegia oxysepala HOM05D001312 ORTHO05D008018 8.7e-152 540.8 385 69.4
VMungo0720G0477 Vigna mungo HOM05D001312 ORTHO05D008018 8.7e-152 540.8 382 68.8
Cc06_g05050 Coffea canephora HOM05D001312 ORTHO05D008018 1.5e-151 540.0 381 69.3
Migut.J00495 Erythranthe guttata HOM05D001312 ORTHO05D008018 1.5e-151 540.0 385 68.6
FAN09G2766 Fragaria x ananassa HOM05D001312 ORTHO05D008018 3.3e-151 538.9 411 65.5
ECA248G1880 Erigeron canadensis HOM05D001312 ORTHO05D008018 4.3e-151 538.5 388 67.0
Gohir.A04G066728 Gossypium hirsutum HOM05D001312 ORTHO05D008018 7.4e-151 537.7 382 69.1
Glyma.10G065300 Glycine max HOM05D001312 ORTHO05D008018 1.3e-150 537.0 382 68.3
BcaC06g32083 Brassica carinata HOM05D001312 ORTHO05D008018 1.6e-150 536.6 386 67.1
TPR.G5684 Trifolium pratense HOM05D001312 ORTHO05D008018 8.2e-150 534.3 382 67.0
FAN02G1263 Fragaria x ananassa HOM05D001312 ORTHO05D008018 5.3e-149 531.6 385 68.6
Nitab4.5_0004490g0050 Nicotiana tabacum HOM05D001312 ORTHO05D008018 9.0e-149 530.8 411 63.7
A10p32330 Brassica napus HOM05D001312 ORTHO05D008018 1.2e-148 530.4 387 67.4
BraA10t45274Z Brassica rapa HOM05D001312 ORTHO05D008018 1.2e-148 530.4 387 67.4
AT5G03770 Arabidopsis thaliana HOM05D001312 ORTHO05D008018 2.0e-148 529.6 381 67.7
Thhalv10013569m.g Eutrema salsugineum HOM05D001312 ORTHO05D008018 2.0e-148 529.6 383 67.4
SalBow3G2703 Salvia bowleyana HOM05D001312 ORTHO05D008018 3.4e-148 528.9 410 64.1
Sp6g38960 Schrenkiella parvula HOM05D001312 ORTHO05D008018 5.9e-148 528.1 386 66.8
C09p73160 Brassica napus HOM05D001312 ORTHO05D008018 1.0e-147 527.3 387 67.4
BolC9t60051H Brassica oleracea HOM05D001312 ORTHO05D008018 1.0e-147 527.3 387 67.4
HanXRQChr01g0028401 Helianthus annuus HOM05D001312 ORTHO05D008018 8.5e-147 524.2 380 66.8
Nn6g35083 Nelumbo nucifera HOM05D001312 ORTHO05D008018 1.1e-146 523.9 385 67.5
QL07p040881 Quercus lobata HOM05D001312 ORTHO05D008018 1.9e-146 523.1 453 59.8
Sabra16G0101200 Salix brachista HOM05D001312 ORTHO05D008018 1.9e-146 523.1 497 55.3
Carub.0006s0268 Capsella rubella HOM05D001312 ORTHO05D008018 2.5e-146 522.7 383 66.8
Medtr1g061560 Medicago truncatula HOM05D001312 ORTHO05D008018 3.2e-146 522.3 380 66.3
Lsat_1_v5_gn_1_50640 Lactuca sativa HOM05D001312 ORTHO05D008018 7.2e-146 521.2 387 65.6
Atru.BG.216.p Acer truncatum HOM05D001312 ORTHO05D008018 1.8e-144 516.5 386 67.6
AL6G13310 Arabidopsis lyrata HOM05D001312 ORTHO05D008018 1.5e-143 513.5 403 63.5
PSO063G2793 Papaver somniferum HOM05D001312 ORTHO05D008018 2.0e-143 513.1 422 58.1
SGA_v2.0_scaffold40G15429 Striga asiatica HOM05D001312 ORTHO05D008018 9.7e-143 510.8 397 64.5
THA.LOC104816378 Tarenaya hassleriana HOM05D001312 ORTHO05D008018 1.3e-142 510.4 383 65.3
Solyc10g083710.2 Solanum lycopersicum HOM05D001312 ORTHO05D008018 6.3e-142 508.1 385 63.9
PSO339G3022 Papaver somniferum HOM05D001312 ORTHO05D008018 1.4e-141 506.9 374 63.6
Oeu039841.2 Olea europaea HOM05D001312 ORTHO05D008018 3.1e-141 505.8 512 53.7
EL10Ac7g16768 Beta vulgaris HOM05D001312 ORTHO05D008018 3.8e-139 498.8 385 62.3
Haze_19515 Corylus avellana HOM05D001312 ORTHO05D008018 2.2e-134 483.0 382 63.4
Atru.chr8.1664 Acer truncatum HOM05D001312 ORTHO05D008018 5.0e-131 471.9 326 70.6
Ca_11617_v3 Cicer arietinum L. HOM05D001312 ORTHO05D008018 1.4e-130 470.3 382 61.5
Nitab4.5_0000132g0320 Nicotiana tabacum HOM05D001312 ORTHO05D008018 1.4e-130 470.3 411 58.4
CiPaw.09G007400 Carya illinoinensis HOM05D001312 ORTHO05D008018 1.6e-129 466.8 316 74.1
ATR0820G168 Amborella trichopoda HOM05D001312 ORTHO05D008018 7.4e-127 458.0 386 57.8
Zm00001eb147410 Zea mays HOM05D001312 ORTHO05D008018 1.9e-122 443.4 382 56.0
Hma1.2p1_0651F.1_g195720 Hydrangea macrophylla HOM05D001312 ORTHO05D008018 3.2e-122 442.6 287 76.3
unitig_744.g24689 Utricularia gibba HOM05D001312 ORTHO05D008018 9.4e-122 441.0 381 58.8
SEGI_32755 Sequoiadendron giganteum HOM05D001312 ORTHO05D008018 8.0e-121 438.0 374 57.8
Ah.15g091190 Amaranthus hybridus HOM05D001312 ORTHO05D008018 1.8e-120 436.8 385 57.7
Peaxi162Scf00110g01214 Petunia axillaris HOM05D001312 ORTHO05D008018 1.7e-115 420.2 401 56.6
Aa31LG1G21490 Aethionema arabicum HOM05D001312 ORTHO05D008018 3.8e-115 419.1 352 61.9
MBI01_g23067_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 6.1e-113 411.8 289 66.4
Prupe.7G120300 Prunus persica HOM05D001312 ORTHO05D008018 8.8e-112 407.9 264 75.8
CARHR209530 Cardamine hirsuta HOM05D001312 ORTHO05D008018 4.5e-108 395.6 287 65.5
Pp3c21_8090 Physcomitrium patens HOM05D001312 ORTHO05D008018 1.2e-105 387.5 374 50.8
SMO364G0357 Selaginella moellendorffii HOM05D001312 ORTHO05D008018 5.9e-100 368.6 377 49.9
Ciclev10032390m.g Citrus clementina HOM05D001312 ORTHO05D008018 2.3e-99 366.7 251 70.1
Psat6g076240 Pisum sativum HOM05D001312 ORTHO05D008018 2.9e-99 366.3 249 72.7
AagrBONN_evm.TU.Sc2ySwM_344.3661 Anthoceros agrestis HOM05D001312 ORTHO05D008018 5.0e-99 365.5 383 48.0
DCAR_015029 Daucus carota HOM05D001312 ORTHO05D008018 2.4e-93 346.7 274 63.1
Mapoly0002s0209 Marchantia polymorpha HOM05D001312 ORTHO05D008018 2.4e-93 346.7 376 46.8
CBR_g874 Chara braunii HOM05D001312 ORTHO05D008018 5.2e-88 328.9 352 48.9
Hund20444 Selenicereus undatus HOM05D001312 ORTHO05D008018 5.1e-75 285.8 232 60.8
Os01g0857300 Oryza sativa ssp. japonica HOM05D001312 ORTHO05D008018 1.0e-59 235.0 196 58.7
Lalb_Chr21g0315431 Lupinus albus HOM05D001312 ORTHO05D008018 5.8e-55 219.2 154 68.8
Sopen10g033180 Solanum pennellii HOM05D001312 ORTHO05D008018 2.0e-47 194.1 126 72.2
AUR62037894 Chenopodium quinoa HOM05D001312 ORTHO05D008018 1.3e-46 191.4 232 47.0
arahy.Tifrunner.gnm1.ann1.IWGZ26 Arachis hypogaea HOM05D001312 ORTHO05D008018 6.0e-44 182.6 158 58.9
HPP92_006792 Vanilla planifolia HOM05D001312 ORTHO05D008018 2.5e-42 177.2 200 45.5
AUR62033601 Chenopodium quinoa HOM05D001312 ORTHO05D008018 2.8e-41 173.7 269 38.3
Glyma.13G150200 Glycine max HOM05D001312 ORTHO05D008018 8.2e-41 172.2 126 69.8
CARHR208850 Cardamine hirsuta HOM05D001312 ORTHO05D008018 7.6e-39 165.6 132 60.6
HPP92_006796 Vanilla planifolia HOM05D001312 ORTHO05D008018 3.0e-35 153.7 287 34.8
Lalb_Chr21g0315421 Lupinus albus HOM05D001312 ORTHO05D008018 1.9e-34 151.0 98 77.6
MBI01_g48091_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 5.9e-31 139.4 96 72.9
DCAR_015030 Daucus carota HOM05D001312 ORTHO05D008018 1.3e-30 138.3 92 65.2
Zm00001eb059120 Zea mays HOM05D000212 ORTHO05D008018 1.9e-29 134.4 96 59.4
CARHR208860 Cardamine hirsuta HOM05D001312 ORTHO05D008018 5.5e-29 132.9 98 68.4
Lalb_Chr21g0315441 Lupinus albus HOM05D001312 ORTHO05D008018 2.1e-28 131.0 93 63.4
Cre13.g583100 Chlamydomonas reinhardtii HOM05D001312 ORTHO05D008018 9.7e-26 122.1 361 31.3
Ciclev10013092m.g Citrus clementina HOM05D001312 ORTHO05D008018 9.7e-26 122.1 73 80.8
arahy.Tifrunner.gnm1.ann1.UHL2QJ Arachis hypogaea HOM05D000705 ORTHO05D008018 3.3e-18 97.1 169 31.4
Zm00001eb009840 Zea mays HOM05D001312 ORTHO05D008018 2.5e-13 80.9 70 51.4
Zm00001eb059130 Zea mays HOM05D000212 ORTHO05D002824 2.3e-11 74.3 55 56.4
VMungo0251G1834 Vigna mungo HOM05D001312 ORTHO05D008018 4.8e-09 66.6 50 54.0


User provided reference genes

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