Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 2.0e-189 665.6 330 100.0
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 1.1e-99 367.5 341 60.4
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 2.0e-93 346.7 343 55.4
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 2.7e-90 336.3 328 54.9
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 5.0e-84 315.5 353 50.1
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 4.2e-83 312.4 339 54.3
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.4e-81 307.4 352 52.3
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 3.1e-78 296.2 322 54.0
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 3.6e-74 282.7 364 47.3
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 8.8e-73 278.1 329 49.2
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 2.8e-71 273.1 301 52.5
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 3.7e-71 272.7 320 50.9
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 1.5e-69 267.3 318 49.7
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 8.5e-68 261.5 317 49.8
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 1.1e-67 261.2 331 47.4
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 1.1e-67 261.2 311 47.3
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 4.2e-67 259.2 317 48.6
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.6e-66 257.3 346 47.4
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 6.7e-65 251.9 322 48.1
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 4.4e-64 249.2 332 46.1
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 7.4e-64 248.4 349 44.7
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 1.8e-62 243.8 324 46.0
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 4.1e-62 242.7 320 44.4
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 1.0e-60 238.0 327 46.5
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 6.1e-58 228.8 320 44.1
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 1.0e-57 228.0 286 47.6
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 1.8e-57 227.3 332 42.5
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 5.4e-54 215.7 329 42.6
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 7.0e-54 215.3 349 39.8
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 7.0e-54 215.3 328 42.1
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 2.7e-53 213.4 326 40.8
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 3.5e-53 213.0 335 41.8
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 3.8e-52 209.5 352 42.0
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 2.2e-47 193.7 159 63.5
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 3.1e-46 189.9 191 51.8
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 7.7e-45 185.3 325 39.4
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 6.6e-44 182.2 350 40.0
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 8.6e-44 181.8 339 40.1
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 9.5e-43 178.3 324 38.0
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 9.5e-43 178.3 283 39.6
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.6e-42 177.6 215 45.6
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 1.8e-41 174.1 351 37.6
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 6.8e-41 172.2 305 39.7
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 9.2e-38 161.8 339 36.9
Manes.09G049502 Manihot esculenta HOM05D008196 ORTHO05D010261 4.1e-30 136.3 104 60.6
QL07p041763 Quercus lobata HOM05D008196 ORTHO05D010261 4.0e-25 119.8 173 43.9
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 3.7e-23 113.2 327 33.0
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 3.7e-23 113.2 247 35.6
HPP92_014786 Vanilla planifolia HOM05D008196 ORTHO05D010261 1.1e-22 111.7 304 32.2
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.7e-21 107.1 180 36.7
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.7e-21 107.1 180 36.7
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 8.6e-20 102.1 191 35.6
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 4.0e-17 93.2 332 31.6
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.2e-16 91.7 83 61.4
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 1.5e-16 91.3 215 31.2
CSS0016699 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 2.6e-16 90.5 125 46.4
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 5.8e-16 89.4 85 57.6
PGR142G2786 Punica granatum HOM05D008196 ORTHO05D010261 7.6e-16 89.0 326 29.1
ECA233G4339 Erigeron canadensis HOM05D005316 ORTHO05D006495 3.7e-15 86.7 95 51.6
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 4.9e-15 86.3 200 32.5
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 7.1e-14 82.4 117 47.0
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 2.7e-13 80.5 72 65.3
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 2.7e-13 80.5 72 65.3
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 3.5e-13 80.1 118 46.6
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 3.5e-13 80.1 201 30.8
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 6.0e-13 79.3 197 31.5
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 1.5e-11 74.7 72 59.7
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 4.3e-11 73.2 175 28.6
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 5.6e-11 72.8 103 37.9
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 6.2e-10 69.3 208 29.8
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 8.1e-10 68.9 191 28.3
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.1e-09 68.6 179 30.7
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 1.1e-09 68.6 184 29.3
CSS0003728 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 2.4e-09 67.4 50 58.0
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 4.0e-09 66.6 182 31.3
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 4.0e-09 66.6 227 25.1
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 1.2e-08 65.1 200 27.0
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 2.6e-08 63.9 189 25.4
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 2.6e-08 63.9 184 26.6
DCAR_027433 Daucus carota HOM05D008196 ORTHO05D010261 3.4e-08 63.5 48 56.2
DCAR_031984 Daucus carota HOM05D008196 ORTHO05D010261 3.4e-08 63.5 48 56.2
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 3.4e-08 63.5 176 29.0
Cfa021114 Carpinus fangiana HOM05D008196 ORTHO05D010261 4.4e-08 63.2 122 38.5
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 1.3e-07 61.6 176 25.6
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 2.9e-07 60.5 84 34.5
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 4.9e-07 59.7 197 26.4
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 4.9e-07 59.7 181 27.1
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 8.4e-07 58.9 213 26.8
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 1.4e-06 58.2 207 23.2
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 1.9e-06 57.8 89 33.7
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 2.4e-06 57.4 173 27.2
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 5.4e-06 56.2 173 27.2
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 5.4e-06 56.2 173 27.2
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 5.4e-06 56.2 173 27.2
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 5.4e-06 56.2 198 25.3


User provided reference genes

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