Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033498001 Vitis vinifera HOM05D004472 ORTHO05D007169 9.1e-259 896.3 440 100.0
Prupe.7G076900 Prunus persica HOM05D004472 ORTHO05D007169 4.0e-230 801.2 440 87.3
Dinv24072 Davidia involucrata HOM05D004472 ORTHO05D007169 3.4e-229 798.1 440 87.5
Hma1.2p1_0386F.1_g141865 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 5.7e-229 797.3 440 86.8
CiPaw.10G026500 Carya illinoinensis HOM05D004472 ORTHO05D007169 2.8e-228 795.0 439 85.9
CSS0032720 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 5.4e-227 790.8 440 85.9
Actinidia22035 Actinidia chinensis HOM05D004472 ORTHO05D007169 5.9e-226 787.3 440 85.2
Cpa.g.sc85.67 Carica papaya HOM05D004472 ORTHO05D007169 5.9e-226 787.3 439 84.5
QL07p023729 Quercus lobata HOM05D004472 ORTHO05D007169 7.8e-226 786.9 439 84.7
Gohir.A04G055778 Gossypium hirsutum HOM05D004472 ORTHO05D007169 1.3e-225 786.2 440 85.0
TAR623G1736 Trochodendron aralioides HOM05D004472 ORTHO05D007169 5.0e-225 784.3 440 85.0
MD12G1057200 Malus domestica HOM05D004472 ORTHO05D007169 3.3e-224 781.6 440 84.5
CSS0031939 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 7.3e-224 780.4 440 85.0
TWI77G0336 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 3.6e-223 778.1 440 83.6
Gorai.012G101400 Gossypium raimondii HOM05D004472 ORTHO05D007169 1.0e-222 776.5 440 83.9
Manes.08G044600 Manihot esculenta HOM05D004472 ORTHO05D007169 2.3e-222 775.4 440 84.1
Gohir.D04G090500 Gossypium hirsutum HOM05D004472 ORTHO05D007169 1.2e-221 773.1 440 83.6
MD14G1057800 Malus domestica HOM05D004472 ORTHO05D007169 4.4e-221 771.2 436 83.9
COL.COLO4_33983 Corchorus olitorius HOM05D004472 ORTHO05D007169 6.4e-220 767.3 438 83.3
Atru.chr8.1111 Acer truncatum HOM05D004472 ORTHO05D007169 1.1e-219 766.5 438 83.8
RcHm_v2.0_Chr3g0479691 Rosa chinensis HOM05D004472 ORTHO05D007169 4.1e-219 764.6 437 83.1
Ca_08520_v3 Cicer arietinum L. HOM05D004472 ORTHO05D007169 7.0e-219 763.8 430 84.0
CsaV3_3G038830 Cucumis sativus L. HOM05D004472 ORTHO05D007169 7.0e-219 763.8 438 81.7
Potri.016G045800 Populus trichocarpa HOM05D004472 ORTHO05D007169 9.2e-219 763.5 438 82.9
THA.LOC104824475 Tarenaya hassleriana HOM05D004472 ORTHO05D007169 1.6e-218 762.7 437 82.4
Glyma.03G144600 Glycine max HOM05D004472 ORTHO05D007169 2.7e-218 761.9 432 83.6
SGA_v2.0_scaffold69G23061 Striga asiatica HOM05D004472 ORTHO05D007169 2.7e-218 761.9 439 82.0
TWI74G0546 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 1.7e-217 759.2 440 81.8
Lj1g0006426 Lotus japonicus HOM05D004472 ORTHO05D007169 2.3e-217 758.8 434 83.2
Potri.006G192400 Populus trichocarpa HOM05D004472 ORTHO05D007169 2.3e-217 758.8 438 81.3
CANSAT64G0932 Cannabis sativa HOM05D004472 ORTHO05D007169 3.0e-217 758.4 440 84.3
arahy.Tifrunner.gnm1.ann1.VM941Y Arachis hypogaea HOM05D004472 ORTHO05D007169 3.9e-217 758.1 441 81.9
MSTRG.6484 Avicennia marina HOM05D004472 ORTHO05D007169 8.6e-217 756.9 441 83.2
Eucgr.K01838 Eucalyptus grandis HOM05D004472 ORTHO05D007169 1.1e-216 756.5 438 83.3
arahy.Tifrunner.gnm1.ann1.W50LA9 Arachis hypogaea HOM05D004472 ORTHO05D007169 2.5e-216 755.4 441 81.4
Sabra16G0049800 Salix brachista HOM05D004472 ORTHO05D007169 7.3e-216 753.8 440 81.8
CAN.G273.20 Capsicum annuum HOM05D004472 ORTHO05D007169 1.6e-215 752.7 441 81.2
Glyma.19G147500 Glycine max HOM05D004472 ORTHO05D007169 2.1e-215 752.3 432 82.4
Sopen03g016030 Solanum pennellii HOM05D004472 ORTHO05D007169 2.8e-215 751.9 441 82.8
FvH4_6g22330 Fragaria vesca HOM05D004472 ORTHO05D007169 4.7e-215 751.1 438 81.5
TPR.G18209 Trifolium pratense HOM05D004472 ORTHO05D007169 1.1e-214 750.0 430 82.1
Sc25g0005090 Simmondsia chinensis HOM05D004472 ORTHO05D007169 1.8e-214 749.2 455 79.3
Nn3g18269 Nelumbo nucifera HOM05D004472 ORTHO05D007169 8.9e-214 746.9 436 82.3
AT2G42120 Arabidopsis thaliana HOM05D004472 ORTHO05D007169 2.0e-213 745.7 438 79.5
Thhalv10016664m.g Eutrema salsugineum HOM05D004472 ORTHO05D007169 7.5e-213 743.8 438 79.0
Sed0018995 Sechium edule HOM05D004472 ORTHO05D007169 9.8e-213 743.4 438 79.0
Medtr7g093210 Medicago truncatula HOM05D004472 ORTHO05D007169 1.7e-212 742.7 426 82.6
Lalb_Chr15g0079011 Lupinus albus HOM05D004472 ORTHO05D007169 2.2e-212 742.3 440 78.9
Rhsim03G0006000 Rhododendron simsii HOM05D004472 ORTHO05D007169 4.9e-212 741.1 420 84.5
EL10Ac3g06916 Beta vulgaris HOM05D004472 ORTHO05D007169 6.4e-212 740.7 438 80.4
Sabra06G0147500 Salix brachista HOM05D004472 ORTHO05D007169 6.4e-212 740.7 439 79.3
FAN14G1969 Fragaria x ananassa HOM05D004472 ORTHO05D007169 1.1e-211 740.0 448 79.0
AL4G40490 Arabidopsis lyrata HOM05D004472 ORTHO05D007169 1.2e-210 736.5 439 78.1
Migut.J01839 Erythranthe guttata HOM05D004472 ORTHO05D007169 3.5e-210 734.9 439 78.6
BcaB06g29226 Brassica carinata HOM05D004472 ORTHO05D007169 4.6e-210 734.6 437 78.7
A04p32010 Brassica napus HOM05D004472 ORTHO05D007169 1.0e-209 733.4 437 78.9
Lj2C366G13 Lonicera japonica HOM05D004472 ORTHO05D007169 1.3e-209 733.0 421 84.1
BraA04t18658Z Brassica rapa HOM05D004472 ORTHO05D007169 3.0e-209 731.9 437 78.7
Sp4g24330 Schrenkiella parvula HOM05D004472 ORTHO05D007169 3.0e-209 731.9 438 78.1
Aqoxy1G00476 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 3.9e-209 731.5 436 78.0
BcaC02g07263 Brassica carinata HOM05D004472 ORTHO05D007169 6.6e-209 730.7 438 78.8
Phvul.001G143200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 8.6e-209 730.3 432 80.1
ECA248G2191 Erigeron canadensis HOM05D004472 ORTHO05D007169 1.9e-208 729.2 438 78.5
Thecc.05G171300 Theobroma cacao HOM05D004472 ORTHO05D007169 3.3e-208 728.4 396 86.6
FAN05G5703 Fragaria x ananassa HOM05D004472 ORTHO05D007169 4.3e-208 728.0 438 79.7
C04p69510 Brassica napus HOM05D004472 ORTHO05D007169 7.3e-208 727.2 437 78.3
Oeu007762.1 Olea europaea HOM05D004472 ORTHO05D007169 9.5e-208 726.9 427 81.7
BolC4t28450H Brassica oleracea HOM05D004472 ORTHO05D007169 1.8e-206 722.6 438 78.1
HanXRQChr13g0390871 Helianthus annuus HOM05D004472 ORTHO05D007169 3.1e-206 721.8 440 78.2
Solyc03g063340.3 Solanum lycopersicum HOM05D004472 ORTHO05D007169 3.1e-206 721.8 421 82.9
Aa31LG1G24100 Aethionema arabicum HOM05D004472 ORTHO05D007169 6.8e-206 720.7 446 75.8
PGR142G1378 Punica granatum HOM05D004472 ORTHO05D007169 8.9e-206 720.3 440 77.7
PSO339G4742 Papaver somniferum HOM05D004472 ORTHO05D007169 1.2e-205 719.9 436 79.1
Carub.0004s2446 Capsella rubella HOM05D004472 ORTHO05D007169 1.5e-205 719.5 437 77.8
Hund19203 Selenicereus undatus HOM05D004472 ORTHO05D007169 2.9e-204 715.3 424 80.2
PSO384G4825 Papaver somniferum HOM05D004472 ORTHO05D007169 8.3e-204 713.8 436 78.4
FAN02G0232 Fragaria x ananassa HOM05D004472 ORTHO05D007169 1.4e-203 713.0 464 75.4
Psat3g068520 Pisum sativum HOM05D004472 ORTHO05D007169 4.1e-203 711.4 417 80.1
CSS0048424 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 1.6e-202 709.5 454 77.3
Nitab4.5_0001137g0080 Nicotiana tabacum HOM05D004472 ORTHO05D007169 1.6e-202 709.5 442 78.3
FAN09G4048 Fragaria x ananassa HOM05D004472 ORTHO05D007169 1.0e-201 706.8 448 77.0
Phvul.001G142200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 3.0e-201 705.3 432 77.8
VMungo1383G3660 Vigna mungo HOM05D004472 ORTHO05D007169 3.6e-199 698.4 414 80.2
Lsat_1_v5_gn_5_163440 Lactuca sativa HOM05D004472 ORTHO05D007169 4.7e-199 698.0 423 78.0
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 2.6e-197 692.2 417 77.0
Nitab4.5_0007619g0020 Nicotiana tabacum HOM05D004472 ORTHO05D007169 8.7e-193 677.2 421 78.6
vmacro07908 Vaccinium macrocarpon HOM05D004472 ORTHO05D007169 8.7e-193 677.2 473 71.9
Haze_19988 Corylus avellana HOM05D004472 ORTHO05D007169 7.3e-192 674.1 496 69.0
Os03g0128500 Oryza sativa ssp. japonica HOM05D004472 ORTHO05D007169 9.6e-192 673.7 432 72.7
Zm00001eb002170 Zea mays HOM05D004472 ORTHO05D007169 2.9e-188 662.1 434 71.7
Ah.13g075820 Amaranthus hybridus HOM05D004472 ORTHO05D007169 3.8e-188 661.8 407 78.1
HPP92_018591 Vanilla planifolia HOM05D004472 ORTHO05D007169 2.3e-185 652.5 434 68.9
ClCG10G017520 Citrullus lanatus HOM05D004472 ORTHO05D007169 4.3e-184 648.3 447 71.6
SEGI_25790 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 2.1e-178 629.4 438 66.9
HPP92_006516 Vanilla planifolia HOM05D004472 ORTHO05D007169 3.5e-178 628.6 479 62.8
Haze_19990 Corylus avellana HOM05D004472 ORTHO05D007169 8.7e-177 624.0 469 67.4
MELO3C030998.2 Cucumis melo HOM05D004472 ORTHO05D007169 4.3e-176 621.7 540 60.9
CDE04G2547 Ceratophyllum demersum HOM05D004472 ORTHO05D007169 1.5e-173 613.2 393 75.6
PGSC0003DMG400014974 Solanum tuberosum HOM05D004472 ORTHO05D007169 1.7e-172 609.8 356 83.4
Sed0005670 Sechium edule HOM05D004472 ORTHO05D007169 2.2e-172 609.4 364 80.5
SalBow6G5437 Salvia bowleyana HOM05D004472 ORTHO05D007169 8.4e-172 607.4 421 71.0
Duzib128G1617 Durio zibethinus HOM05D004472 ORTHO05D007169 1.8e-169 599.7 440 68.0
ATR0807G137 Amborella trichopoda HOM05D004472 ORTHO05D007169 3.4e-165 585.5 392 71.7
AUR62015368 Chenopodium quinoa HOM05D004472 ORTHO05D007169 1.8e-161 573.2 438 65.5
Aqoxy2G02978 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 1.9e-155 553.1 464 60.6
Pp3c3_28090 Physcomitrium patens HOM05D004472 ORTHO05D007169 3.6e-154 548.9 429 59.2
Mapoly0039s0092 Marchantia polymorpha HOM05D004472 ORTHO05D007169 6.7e-153 544.7 438 60.0
AUR62012036 Chenopodium quinoa HOM05D004472 ORTHO05D007169 6.3e-151 538.1 421 64.4
AagrBONN_evm.TU.Sc2ySwM_362.678 Anthoceros agrestis HOM05D004472 ORTHO05D007169 2.0e-149 533.1 463 57.0
SMO111G0006 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 5.9e-149 531.6 435 57.5
SMO339G0063 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 5.9e-141 505.0 431 56.4
CBR_g38861 Chara braunii HOM05D004472 ORTHO05D000002 5.3e-134 481.9 444 53.6
CARHR137180 Cardamine hirsuta HOM05D004472 ORTHO05D007169 9.7e-128 461.1 270 79.6
CBR_g63079 Chara braunii HOM05D004472 ORTHO05D007169 2.7e-125 453.0 411 54.5
MBI06_g29494_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 7.5e-120 434.9 246 81.3
Ciclev10012551m.g Citrus clementina HOM05D004472 ORTHO05D007169 2.2e-111 406.8 244 82.0
Hma1.2p1_0386F.1_g141870 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 1.3e-103 380.9 196 89.3
Ciclev10012767m.g Citrus clementina HOM05D004472 ORTHO05D007169 8.6e-100 368.2 196 84.7
SHI42174 Sapria himalayana HOM05D004472 ORTHO05D007169 1.1e-99 367.9 285 64.6
PRCOL_00001477 Prasinoderma coloniale HOM05D004472 ORTHO05D007169 8.0e-98 361.7 388 43.6
MCO03G010 Micromonas commoda HOM05D004472 ORTHO05D007169 5.2e-97 359.0 450 42.7
Cre08.g374050 Chlamydomonas reinhardtii HOM05D004472 ORTHO05D007169 6.8e-97 358.6 508 39.0
Peaxi162Scf00258g00730 Petunia axillaris HOM05D004472 ORTHO05D007169 1.5e-96 357.5 243 74.9
MBI06_g29491_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 5.3e-65 252.7 167 73.7
SHI33668 Sapria himalayana HOM05D004472 ORTHO05D007169 3.4e-64 250.0 197 62.9
SEGI_31079 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 1.8e-52 211.1 169 59.8
BcaNung04407 Brassica carinata HOM05D004472 ORTHO05D007169 5.7e-51 206.1 246 47.2
Lsat_1_v5_gn_5_163500 Lactuca sativa HOM05D004472 ORTHO05D007169 2.8e-50 203.8 184 57.6
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 7.6e-48 195.7 419 32.7
Peaxi162Scf00258g00729 Petunia axillaris HOM05D004472 ORTHO05D007169 1.8e-44 184.5 95 85.3
BcaNung06765 Brassica carinata HOM05D004472 ORTHO05D027254 5.7e-43 179.5 139 61.9
BcaC04g21709 Brassica carinata HOM05D004472 ORTHO05D013781 7.4e-43 179.1 152 58.6
BcaC03g16493 Brassica carinata HOM05D004472 ORTHO05D013781 3.7e-42 176.8 195 49.2
A02p27200 Brassica napus HOM05D004472 ORTHO05D013781 1.4e-41 174.9 113 66.4
SEGI_39608 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 3.8e-39 166.8 132 58.3
BcaB02g11100 Brassica carinata HOM05D004472 ORTHO05D027254 3.1e-33 147.1 143 53.8
BolC9t55720H Brassica oleracea HOM05D004472 ORTHO05D013781 9.1e-33 145.6 96 67.7
A09p46770 Brassica napus HOM05D004472 ORTHO05D013781 1.0e-31 142.1 86 70.9
BcaC01g04270 Brassica carinata HOM05D004472 ORTHO05D013781 4.2e-30 136.7 125 56.0
BcaC02g12460 Brassica carinata HOM05D004472 ORTHO05D013781 5.1e-28 129.8 129 54.3
BcaNung00145 Brassica carinata HOM05D004472 ORTHO05D013781 1.3e-26 125.2 126 52.4
BcaC05g24672 Brassica carinata HOM05D004472 ORTHO05D027254 1.9e-22 111.3 124 49.2
SEGI_06501 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 2.7e-21 107.5 96 54.2
CARHR228030 Cardamine hirsuta HOM05D004472 ORTHO05D039758 1.7e-18 98.2 67 76.1
C03p43020 Brassica napus HOM05D004472 ORTHO05D013781 1.1e-17 95.5 66 65.2
BcaB02g11125 Brassica carinata HOM05D004472 ORTHO05D039758 1.2e-13 82.0 65 67.7
CARHR228020 Cardamine hirsuta HOM05D004472 ORTHO05D007169 2.7e-13 80.9 71 54.9
SMO364G0765 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 4.4e-11 73.6 43 76.7
BcaB06g25539 Brassica carinata HOM05D004472 ORTHO05D094557 1.8e-09 68.2 82 46.3
BraA08t32859Z Brassica rapa HOM05D004472 ORTHO05D027254 5.4e-09 66.6 51 62.7
BolC3t16570H Brassica oleracea HOM05D004472 ORTHO05D013781 3.5e-08 63.9 55 58.2
BraA07t27940Z Brassica rapa HOM05D004472 ORTHO05D013781 3.5e-08 63.9 55 58.2
BraA06t25637Z Brassica rapa HOM05D004472 ORTHO05D013781 7.7e-08 62.8 53 58.5
CARHR241940 Cardamine hirsuta HOM05D004472 ORTHO05D007169 8.5e-07 59.3 57 47.4
A08p00430 Brassica napus HOM05D004472 ORTHO05D033033 7.2e-06 56.2 63 47.6
C06p10840 Brassica napus HOM05D004472 ORTHO05D033033 7.2e-06 56.2 63 47.6


User provided reference genes

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