Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 5.0e-100 367.9 194 100.0
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 8.5e-84 313.9 194 85.6
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 8.5e-84 313.9 194 85.6
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 1.9e-83 312.8 194 85.1
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 1.9e-83 312.8 195 85.6
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 2.5e-83 312.4 194 85.1
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 7.2e-83 310.8 192 85.4
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 7.2e-83 310.8 194 86.1
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 3.6e-82 308.5 192 83.9
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 4.7e-82 308.1 194 83.0
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 1.0e-81 307.0 194 85.6
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 1.4e-81 306.6 190 84.7
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 1.4e-81 306.6 196 84.7
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 1.8e-81 306.2 194 84.5
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 2.3e-81 305.8 194 83.0
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 3.0e-81 305.4 195 84.1
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 3.0e-81 305.4 194 84.0
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 6.7e-81 304.3 194 82.0
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 1.1e-80 303.5 190 83.7
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 1.1e-80 303.5 190 84.2
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 1.1e-80 303.5 195 83.6
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 1.1e-80 303.5 185 85.9
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.1e-80 303.5 190 83.7
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.5e-80 303.1 195 83.1
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 1.5e-80 303.1 195 83.1
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 1.5e-80 303.1 194 82.0
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 2.6e-80 302.4 195 83.1
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 2.6e-80 302.4 195 82.6
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 3.3e-80 302.0 192 82.8
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 4.4e-80 301.6 191 82.2
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 5.7e-80 301.2 195 82.6
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 9.7e-80 300.4 190 83.2
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 1.7e-79 299.7 195 81.0
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 1.7e-79 299.7 192 83.3
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 1.7e-79 299.7 193 80.8
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 1.7e-79 299.7 195 80.5
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 2.2e-79 299.3 191 83.2
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 2.2e-79 299.3 195 81.0
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 2.2e-79 299.3 194 83.0
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 2.8e-79 298.9 191 83.2
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 3.7e-79 298.5 195 79.5
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 1.1e-78 297.0 192 81.8
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 1.4e-78 296.6 188 84.6
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 1.4e-78 296.6 195 82.6
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 2.4e-78 295.8 191 82.2
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 2.4e-78 295.8 191 82.2
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 3.1e-78 295.4 191 82.2
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 3.1e-78 295.4 191 82.2
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 3.1e-78 295.4 188 83.5
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 3.1e-78 295.4 195 79.5
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 3.1e-78 295.4 195 79.5
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 3.1e-78 295.4 195 79.5
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 7.0e-78 294.3 187 84.0
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 7.0e-78 294.3 187 84.0
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 9.1e-78 293.9 191 82.2
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 1.2e-77 293.5 191 81.7
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 1.2e-77 293.5 191 81.2
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 1.2e-77 293.5 187 83.4
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 2.0e-77 292.7 187 82.9
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 2.0e-77 292.7 187 82.9
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 2.0e-77 292.7 195 80.5
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 2.6e-77 292.4 191 81.7
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 2.6e-77 292.4 191 81.2
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 2.6e-77 292.4 187 82.9
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 3.5e-77 292.0 188 83.5
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 3.5e-77 292.0 187 83.4
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 4.5e-77 291.6 191 80.6
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 4.5e-77 291.6 195 79.0
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 4.5e-77 291.6 194 77.8
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 5.9e-77 291.2 195 79.0
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 7.7e-77 290.8 188 81.9
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 7.7e-77 290.8 187 82.4
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.0e-76 290.4 191 81.2
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.7e-76 289.7 191 80.6
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 2.2e-76 289.3 194 80.4
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 3.8e-76 288.5 204 79.4
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 2.5e-75 285.8 191 79.6
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 7.2e-75 284.3 189 80.4
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 7.2e-75 284.3 194 79.4
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 7.2e-75 284.3 194 79.4
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 2.1e-74 282.7 191 77.0
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 4.7e-74 281.6 192 76.6
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 6.1e-74 281.2 188 77.7
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 1.0e-73 280.4 180 83.3
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.0e-73 280.4 191 77.0
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 1.4e-73 280.0 193 79.3
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.1e-72 276.9 188 78.2
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 2.6e-72 275.8 193 77.7
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 9.7e-72 273.9 188 76.6
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 1.7e-71 273.1 191 74.9
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 4.8e-71 271.6 194 76.3
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 4.8e-71 271.6 197 71.1
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 6.3e-71 271.2 195 77.4
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 9.1e-70 267.3 178 78.1
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 1.2e-69 266.9 190 77.4
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 3.8e-68 261.9 188 72.9
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 3.8e-68 261.9 195 74.9
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 1.5e-67 260.0 184 71.7
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 1.9e-67 259.6 174 78.7
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 5.5e-67 258.1 187 71.7
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 3.6e-66 255.4 181 76.2
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 6.8e-65 251.1 189 73.0
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 8.8e-65 250.8 199 66.8
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 5.7e-64 248.1 201 65.2
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 9.1e-62 240.7 209 61.7
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 2.0e-61 239.6 189 66.7
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 3.8e-60 235.3 185 68.6
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 8.8e-57 224.2 136 86.8
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 1.5e-56 223.4 184 60.3
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 2.0e-56 223.0 195 67.7
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 4.4e-56 221.9 136 86.8
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 5.4e-54 214.9 133 84.2
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 8.6e-52 207.6 194 61.3
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 2.2e-47 193.0 183 62.8
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 2.2e-47 193.0 167 65.3
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 3.0e-44 182.6 192 54.2
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 6.2e-42 174.9 127 77.2
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 3.4e-40 169.1 115 80.0
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 3.7e-39 165.6 122 74.6
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 4.9e-39 165.2 101 80.2
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 1.4e-33 147.1 165 45.5
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 1.6e-29 133.7 135 60.0
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 3.9e-28 129.0 97 69.1
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 4.3e-27 125.6 86 76.7
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 6.8e-25 118.2 106 63.2
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 2.1e-21 106.7 83 72.3
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 3.6e-18 95.9 63 84.1
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 2.4e-17 93.2 172 32.6
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 8.9e-17 91.3 161 34.8
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 8.9e-17 91.3 46 89.1
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 5.8e-16 88.6 71 70.4
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 4.3e-11 72.4 39 82.1
SGA_v2.0_scaffold131G34402 Striga asiatica HOM05D005910 ORTHO05D007088 4.9e-07 58.9 54 68.5
SGA_v2.0_scaffold472G52090 Striga asiatica HOM05D005910 ORTHO05D007088 8.4e-07 58.2 54 68.5


User provided reference genes

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