Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 0.0e+00 1347.4 697 100.0
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 4.8e-312 1074.3 697 79.9
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 2.6e-308 1061.6 765 72.8
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 4.9e-307 1057.4 756 73.5
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 4.3e-303 1044.3 762 72.4
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 8.1e-302 1040.0 724 74.9
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 5.4e-298 1027.3 720 75.3
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 1.7e-296 1022.3 762 71.7
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 6.6e-296 1020.4 757 71.1
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 8.6e-296 1020.0 758 70.1
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 1.1e-295 1019.6 750 71.3
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 4.3e-295 1017.7 755 70.2
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 2.8e-294 1015.0 792 68.7
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 3.6e-294 1014.6 742 72.0
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 8.9e-293 1010.0 755 70.9
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 1.7e-291 1005.7 737 70.7
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 6.4e-291 1003.8 739 71.2
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 6.4e-291 1003.8 762 70.2
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 3.2e-290 1001.5 741 70.4
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 9.2e-290 1000.0 793 67.5
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 6.0e-289 997.3 741 69.9
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 1.5e-287 992.6 741 69.6
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 2.8e-286 988.4 750 68.9
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 1.3e-283 979.5 701 72.8
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.9e-283 978.4 798 66.3
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 1.9e-282 975.7 746 69.2
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 5.4e-282 974.2 749 67.3
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.7e-281 971.8 769 67.9
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 2.3e-280 968.8 724 68.9
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 3.9e-280 968.0 741 68.2
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 3.3e-279 964.9 758 67.4
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 7.3e-279 963.8 731 67.9
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 3.6e-278 961.4 751 66.8
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 6.2e-278 960.7 766 65.8
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 1.4e-277 959.5 738 66.9
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 2.4e-277 958.7 737 67.4
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 4.0e-277 958.0 741 69.1
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 6.9e-277 957.2 741 68.2
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 6.9e-277 957.2 777 67.8
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 1.2e-276 956.4 739 68.2
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 1.3e-275 953.0 761 68.1
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 1.7e-275 952.6 732 67.8
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 3.8e-275 951.4 737 66.6
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 1.9e-274 949.1 792 64.3
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 2.4e-274 948.7 763 65.7
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 5.4e-274 947.6 715 68.5
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 5.4e-274 947.6 732 67.2
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 9.3e-274 946.8 765 64.6
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.2e-273 946.4 722 67.0
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 3.5e-273 944.9 693 69.8
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 3.5e-273 944.9 739 67.3
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 2.3e-272 942.2 732 67.3
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 5.6e-271 937.6 713 67.9
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 2.8e-270 935.3 742 65.1
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 5.8e-268 927.5 738 66.3
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 1.6e-265 919.5 775 63.7
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 9.6e-263 910.2 755 63.6
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 2.8e-262 908.7 758 63.2
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 4.0e-261 904.8 775 62.7
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 5.3e-261 904.4 811 62.1
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 1.2e-260 903.3 755 64.6
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 6.5e-259 897.5 740 64.1
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 8.4e-259 897.1 768 63.8
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 1.4e-258 896.3 716 67.9
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 4.2e-258 894.8 768 62.5
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 5.5e-258 894.4 735 65.4
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 7.1e-258 894.0 695 66.6
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 4.8e-254 881.3 669 68.2
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 2.9e-251 872.1 766 60.6
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 3.8e-251 871.7 688 66.1
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 1.4e-250 869.8 736 64.7
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 2.7e-249 865.5 736 64.7
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 6.1e-249 864.4 766 60.6
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 2.8e-246 855.5 927 55.1
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 5.3e-245 851.3 702 63.0
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 7.7e-244 847.4 773 57.6
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 5.7e-239 831.2 679 63.5
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 1.4e-237 826.6 692 62.4
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 5.3e-237 824.7 692 61.8
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 1.0e-235 820.5 698 61.9
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 1.0e-235 820.5 693 62.6
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 2.7e-233 812.4 692 61.1
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 3.6e-233 812.0 697 61.0
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 3.8e-227 792.0 780 55.6
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 8.0e-225 784.3 697 59.4
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 5.7e-223 778.1 729 58.6
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 2.2e-219 766.1 713 55.0
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 5.5e-218 761.5 697 59.0
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 2.2e-214 749.6 632 64.1
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 9.1e-213 744.2 732 57.5
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 1.5e-210 736.9 713 56.2
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 1.9e-202 709.9 655 60.2
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 3.3e-202 709.1 434 82.3
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 2.3e-192 676.4 703 54.9
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 2.3e-192 676.4 703 54.9
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 2.3e-192 676.4 703 54.9
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 4.1e-189 665.6 665 55.8
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 3.9e-187 659.1 670 54.3
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 3.1e-184 649.4 552 63.2
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 1.2e-183 647.5 741 48.2
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 1.4e-173 614.0 828 42.4
QL07p024699 Quercus lobata HOM05D004031 ORTHO05D006678 1.6e-169 600.5 504 66.7
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 1.8e-168 597.0 401 74.3
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 3.1e-168 596.3 576 57.1
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 1.2e-167 594.3 616 55.8
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 3.8e-166 589.3 580 52.9
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 1.3e-161 574.3 688 46.1
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 1.1e-157 561.2 443 63.7
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 3.3e-154 549.7 491 62.3
Nitab4.5_0000009g0250 Nicotiana tabacum HOM05D004031 ORTHO05D006678 9.9e-151 538.1 496 59.9
QL07p024684 Quercus lobata HOM05D004031 ORTHO05D006678 1.6e-124 451.1 260 83.8
SEGI_16646 Sequoiadendron giganteum HOM05D004031 ORTHO05D006678 1.5e-119 434.5 574 46.3
SHI31751 Sapria himalayana HOM05D004031 ORTHO05D006678 9.4e-109 398.7 488 50.6
Psat7g023080 Pisum sativum HOM05D004031 ORTHO05D006678 5.4e-88 329.7 354 50.8
Cpa.g.c40176 Carica papaya HOM05D004031 ORTHO05D006678 1.5e-85 321.6 230 74.8
Cpa.g.sc85.42 Carica papaya HOM05D004031 ORTHO05D006678 1.4e-83 315.1 194 75.3
TAR623G0223 Trochodendron aralioides HOM05D004031 ORTHO05D006678 2.3e-75 287.7 173 83.2
CSS0030127 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 7.8e-63 246.1 161 73.3
CSS0049250 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 3.6e-52 210.7 118 87.3
SHI31745 Sapria himalayana HOM05D004031 ORTHO05D006678 6.9e-51 206.5 140 68.6
Solyc03g053000.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 9.0e-51 206.1 168 61.3
Peaxi162Scf00463g00519 Petunia axillaris HOM05D004031 ORTHO05D006678 3.4e-50 204.1 142 68.3
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 6.6e-46 189.9 128 70.3
CSS0030002 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 4.2e-40 170.6 114 74.6
Psat4g142720 Pisum sativum HOM05D003784 ORTHO05D004345 3.9e-38 164.1 99 78.8
PRCOL_00003629 Prasinoderma coloniale HOM05D004031 ORTHO05D006678 6.9e-35 153.3 654 24.8
Psat4g142800 Pisum sativum HOM05D003784 ORTHO05D004345 3.2e-32 144.4 86 81.4
CBR_g44463 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-32 144.1 157 44.6
CBR_g32657 Chara braunii HOM05D004031 ORTHO05D006678 1.3e-28 132.5 252 32.9
BcaB06g25555 Brassica carinata HOM05D004031 ORTHO05D006678 1.4e-27 129.0 99 63.6
Aa31LG3G5510 Aethionema arabicum HOM05D004031 ORTHO05D006678 2.4e-27 128.3 91 68.1
Nn3g18463 Nelumbo nucifera HOM05D004031 ORTHO05D006678 5.3e-27 127.1 74 81.1
C05p55850 Brassica napus HOM05D004031 ORTHO05D006678 9.3e-24 116.3 100 56.0
BolC5t34254H Brassica oleracea HOM05D004031 ORTHO05D006678 1.6e-23 115.5 90 57.8
Cre08.g370250 Chlamydomonas reinhardtii HOM05D004031 ORTHO05D006678 1.3e-22 112.5 546 22.9
CBR_g32659 Chara braunii HOM05D001409 ORTHO05D001511 8.2e-20 103.2 154 37.0
MCO13G277 Micromonas commoda HOM05D004031 ORTHO05D006678 6.1e-15 87.0 411 26.3
Nn2g13219 Nelumbo nucifera HOM05D004031 ORTHO05D006678 3.1e-11 74.7 47 74.5
Hund07844 Selenicereus undatus HOM05D004031 ORTHO05D006678 4.5e-10 70.9 62 59.7
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 1.0e-09 69.7 52 57.7
SHI31750 Sapria himalayana HOM05D003430 ORTHO05D014065 6.5e-09 67.0 70 54.3


User provided reference genes

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