Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 5.7e-211 737.3 358 100.0
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 2.7e-152 542.3 341 76.5
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 7.4e-150 534.3 341 75.1
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 3.8e-146 521.9 339 73.7
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 8.4e-146 520.8 339 73.5
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 1.9e-145 519.6 339 73.5
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 4.6e-144 515.0 336 71.1
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 7.9e-144 514.2 336 72.3
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 7.9e-144 514.2 343 71.4
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 3.0e-143 512.3 339 72.6
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 6.7e-143 511.1 350 68.6
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 1.5e-142 510.0 337 70.9
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 3.3e-142 508.8 335 70.7
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 5.7e-142 508.1 333 73.9
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 5.7e-142 508.1 335 71.0
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 5.7e-142 508.1 336 71.1
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 9.7e-142 507.3 337 71.2
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 1.3e-141 506.9 350 70.3
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 1.6e-141 506.5 338 70.1
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 2.8e-141 505.8 343 69.7
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 3.7e-141 505.4 342 69.9
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 3.7e-141 505.4 339 72.3
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 6.3e-141 504.6 336 71.4
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 6.3e-141 504.6 329 69.0
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 8.2e-141 504.2 338 70.1
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 8.2e-141 504.2 336 70.8
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 8.2e-141 504.2 338 68.6
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 1.4e-140 503.4 331 71.3
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 1.8e-140 503.1 332 68.7
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 1.8e-140 503.1 332 68.7
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.8e-140 503.1 337 70.0
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 2.4e-140 502.7 338 71.6
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 2.4e-140 502.7 336 71.4
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 3.1e-140 502.3 329 72.0
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 3.1e-140 502.3 338 70.7
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 4.1e-140 501.9 329 69.0
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 4.1e-140 501.9 338 68.6
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 6.9e-140 501.1 349 69.1
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 9.0e-140 500.7 338 68.3
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 1.2e-139 500.4 338 68.3
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 2.0e-139 499.6 338 70.1
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 2.6e-139 499.2 338 69.2
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 7.6e-139 497.7 330 70.9
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 1.0e-138 497.3 338 69.8
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 1.0e-138 497.3 330 71.2
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 1.3e-138 496.9 336 69.6
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 1.7e-138 496.5 331 69.8
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 2.2e-138 496.1 333 67.9
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 2.2e-138 496.1 338 67.2
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 6.5e-138 494.6 342 69.0
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 6.5e-138 494.6 336 67.9
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.4e-137 493.4 340 70.0
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 3.2e-137 492.3 338 68.3
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 5.5e-137 491.5 343 67.3
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 5.5e-137 491.5 331 68.0
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 7.2e-137 491.1 338 67.8
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 1.2e-136 490.3 337 68.8
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 1.2e-136 490.3 335 69.3
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 2.1e-136 489.6 332 68.1
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 2.7e-136 489.2 333 69.4
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 3.6e-136 488.8 331 68.6
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 3.6e-136 488.8 341 67.7
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 4.6e-136 488.4 331 68.3
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 1.3e-135 486.9 329 68.4
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 6.7e-135 484.6 337 68.0
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 2.5e-134 482.6 332 67.2
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 5.7e-134 481.5 346 66.2
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 5.7e-134 481.5 338 66.0
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 7.4e-134 481.1 335 67.5
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 1.7e-133 479.9 332 68.4
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 2.2e-133 479.6 338 66.0
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 4.1e-132 475.3 346 65.0
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 5.3e-132 474.9 335 66.0
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 9.1e-132 474.2 332 66.3
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 1.5e-131 473.4 335 65.7
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 5.9e-131 471.5 329 68.4
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.3e-130 470.3 329 68.1
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 1.3e-130 470.3 338 63.6
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.9e-130 469.2 329 67.5
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 3.8e-130 468.8 362 61.6
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 5.5e-129 464.9 344 66.3
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 5.5e-129 464.9 383 60.1
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 2.1e-128 463.0 342 65.2
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 4.7e-128 461.8 329 67.2
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 6.1e-128 461.5 339 64.3
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 7.9e-128 461.1 346 65.0
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.4e-127 460.3 330 67.0
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.3e-126 455.7 329 65.7
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 2.4e-124 449.5 338 64.5
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 3.2e-121 439.1 338 60.9
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 2.1e-120 436.4 346 59.5
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 8.0e-120 434.5 337 64.4
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 1.0e-119 434.1 376 59.6
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 1.5e-118 430.3 332 61.1
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 1.5e-118 430.3 329 62.3
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 2.8e-117 426.0 351 62.1
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 3.7e-117 425.6 337 62.6
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 1.8e-116 423.3 285 72.6
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 9.1e-116 421.0 330 60.9
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 1.6e-115 420.2 329 59.6
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 2.7e-112 409.5 328 60.4
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 2.8e-109 399.4 426 50.0
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 1.4e-108 397.1 329 57.4
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 4.1e-108 395.6 347 59.7
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 7.7e-107 391.3 263 70.3
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 2.7e-99 366.3 333 53.8
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 8.6e-98 361.3 251 67.3
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 5.5e-97 358.6 252 66.7
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 2.2e-93 346.7 284 59.5
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.0e-87 327.8 232 64.2
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.7e-82 310.5 226 65.9
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 3.9e-82 309.3 183 77.6
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 4.9e-77 292.4 344 44.2
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 3.1e-71 273.1 340 40.6
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.5e-67 259.6 200 64.5
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 7.3e-65 251.9 334 39.5
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 1.7e-53 214.2 166 65.7
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 9.3e-52 208.4 179 62.0
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.0e-50 203.4 196 58.2
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 8.1e-48 195.3 183 58.5
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 7.1e-44 182.2 257 36.2
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 6.0e-43 179.1 172 58.1
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.1e-40 170.6 204 48.5
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 1.1e-25 121.7 81 64.2
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 4.2e-20 103.2 129 38.0
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.5e-17 94.7 69 65.2
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.3e-17 93.6 108 51.9
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.3e-17 93.2 60 71.7
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.3e-17 93.2 60 71.7
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 4.3e-17 93.2 60 71.7
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 9.7e-17 92.0 69 63.8
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 3.7e-16 90.1 69 62.3
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 3.7e-16 90.1 60 70.0
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 8.2e-16 89.0 107 39.3
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.1e-12 78.6 53 67.9
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.1e-12 78.6 54 66.7
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 1.1e-12 78.6 53 67.9
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 2.7e-11 73.9 61 57.4
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.3e-08 65.1 67 52.2
FAN19G1473 Fragaria x ananassa HOM05D000005 ORTHO05D000294 6.3e-08 62.8 54 57.4
FAN04G0473 Fragaria x ananassa HOM05D015355 ORTHO05D007549 2.6e-06 57.4 39 66.7


User provided reference genes

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