Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 3.8e-218 761.1 369 100.0
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 9.4e-92 341.3 214 73.8
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 1.1e-87 327.8 216 69.4
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.4e-87 327.4 210 71.0
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 1.2e-86 324.3 225 69.3
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 7.7e-86 321.6 227 67.8
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 1.1e-84 317.8 213 66.2
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 2.5e-84 316.6 210 68.6
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 5.5e-84 315.5 217 66.8
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.7e-83 312.4 209 69.9
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 6.1e-83 312.0 216 65.7
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 8.0e-83 311.6 209 69.9
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 8.0e-83 311.6 216 66.7
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 1.0e-82 311.2 217 66.8
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 1.8e-82 310.5 216 66.7
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 1.8e-82 310.5 213 66.7
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 3.0e-82 309.7 209 64.1
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 4.0e-82 309.3 226 65.9
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 5.2e-82 308.9 215 66.5
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 6.8e-82 308.5 213 68.1
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 8.9e-82 308.1 215 66.5
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 8.9e-82 308.1 217 64.5
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 2.0e-81 307.0 252 59.1
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 2.6e-81 306.6 215 68.4
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 3.4e-81 306.2 222 65.8
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 4.4e-81 305.8 217 65.9
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 5.7e-81 305.4 218 65.6
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 1.7e-80 303.9 217 65.4
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 4.9e-80 302.4 208 64.9
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 6.3e-80 302.0 215 64.2
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 6.3e-80 302.0 215 64.7
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 6.3e-80 302.0 215 64.7
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 8.3e-80 301.6 234 62.4
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.1e-79 301.2 205 66.3
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 1.1e-79 301.2 219 63.9
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 1.8e-79 300.4 215 63.7
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 3.2e-79 299.7 215 62.8
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 5.4e-79 298.9 210 62.9
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 7.0e-79 298.5 213 64.8
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 1.2e-78 297.7 221 60.6
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 2.7e-78 296.6 219 64.4
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 2.7e-78 296.6 207 63.3
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 3.5e-78 296.2 216 60.6
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 7.8e-78 295.0 210 63.3
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 1.0e-77 294.7 207 64.3
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 1.0e-77 294.7 209 63.2
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.7e-77 293.9 215 61.9
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 1.7e-77 293.9 215 63.7
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 1.7e-77 293.9 205 65.4
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 2.3e-77 293.5 219 62.1
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 3.9e-77 292.7 214 61.2
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 3.9e-77 292.7 214 61.7
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 6.6e-77 292.0 210 62.4
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 6.6e-77 292.0 219 60.7
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 6.6e-77 292.0 215 60.0
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 1.5e-76 290.8 215 60.0
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 1.9e-76 290.4 217 62.7
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.9e-76 290.4 219 60.3
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 3.3e-76 289.7 218 60.1
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 2.8e-75 286.6 216 61.6
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 2.8e-75 286.6 216 61.6
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 4.7e-75 285.8 215 60.5
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 6.1e-75 285.4 210 61.9
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 8.0e-75 285.0 227 57.7
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 1.4e-74 284.3 224 59.4
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 5.2e-74 282.3 224 58.9
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 6.8e-74 282.0 207 62.3
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 1.2e-73 281.2 218 59.6
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 3.4e-73 279.6 213 62.4
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 4.4e-73 279.3 212 59.4
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 7.5e-73 278.5 227 58.1
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 2.9e-72 276.6 230 56.5
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 2.9e-72 276.6 211 60.7
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 1.4e-71 274.2 217 59.4
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 1.4e-71 274.2 211 60.7
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 4.1e-71 272.7 212 59.4
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 3.5e-70 269.6 221 58.4
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 4.7e-67 259.2 185 62.2
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 1.8e-66 257.3 223 58.3
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 4.0e-66 256.1 213 60.1
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 6.8e-66 255.4 198 60.6
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 5.8e-65 252.3 196 59.7
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 1.7e-64 250.8 162 70.4
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 1.2e-62 244.6 195 59.0
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 1.7e-61 240.7 216 55.1
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 1.7e-61 240.7 204 54.9
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 1.5e-60 237.7 240 51.2
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 7.3e-60 235.3 195 57.4
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 8.1e-59 231.9 165 63.0
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 1.1e-58 231.5 175 63.4
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 1.4e-58 231.1 227 52.9
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 6.8e-58 228.8 201 52.7
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 2.2e-56 223.8 174 57.5
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 1.2e-54 218.0 164 62.2
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 2.3e-53 213.8 188 58.0
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 2.8e-51 206.8 232 47.8
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 5.2e-50 202.6 209 46.4
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 1.2e-46 191.4 190 47.9
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 3.5e-46 189.9 130 66.9
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.9e-40 170.2 108 72.2
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 7.8e-38 162.2 201 40.8
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.5e-36 157.9 213 39.0
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.6e-27 127.9 162 43.8
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 3.1e-26 123.6 97 58.8
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 3.1e-26 123.6 85 61.2
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.5e-20 104.8 82 57.3
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 1.1e-18 98.6 97 47.4
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 1.0e-16 92.0 87 43.7
Dinv12486 Davidia involucrata HOM05D007137 ORTHO05D008982 6.9e-10 69.3 93 49.5
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 1.0e-08 65.5 86 38.4
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.6e-06 58.2 59 49.2


User provided reference genes

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