Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01033134001 Vitis vinifera HOM05D001643 ORTHO05D001580 1.0e-108 396.7 196 100.0
GSVIVG01000044001 Vitis vinifera HOM05D001643 ORTHO05D001580 6.3e-10 68.6 43 74.4
CSS0019541 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D001580 1.2e-08 64.3 46 67.4
CSS0034451 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D001580 1.2e-08 64.3 46 67.4
ATR0693G382 Amborella trichopoda HOM05D001643 ORTHO05D001580 2.6e-08 63.2 76 46.1
Lj9C33G5 Lonicera japonica HOM05D001643 ORTHO05D001580 3.4e-08 62.8 45 66.7
Sc16g0008450 Simmondsia chinensis HOM05D001643 ORTHO05D001580 3.4e-08 62.8 103 42.7
Gohir.A11G295700 Gossypium hirsutum HOM05D001643 ORTHO05D001580 4.5e-08 62.4 43 65.1
Nn4g26241 Nelumbo nucifera HOM05D001643 ORTHO05D001580 5.9e-08 62.0 43 62.8
TAR362G1169 Trochodendron aralioides HOM05D001643 ORTHO05D001580 5.9e-08 62.0 66 51.5
TAR365G0811 Trochodendron aralioides HOM05D001643 ORTHO05D001580 7.7e-08 61.6 59 52.5
ATR0693G328 Amborella trichopoda HOM05D001643 ORTHO05D001580 1.0e-07 61.2 43 65.1
CSS0037311 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D001580 1.0e-07 61.2 45 64.4
Duzib177G1027 Durio zibethinus HOM05D001643 ORTHO05D001580 1.3e-07 60.8 43 65.1
Gohir.D11G311200 Gossypium hirsutum HOM05D001643 ORTHO05D001580 1.3e-07 60.8 43 65.1
PGR083G0958 Punica granatum HOM05D001643 ORTHO05D001580 1.3e-07 60.8 43 67.4
Eucgr.B01990 Eucalyptus grandis HOM05D001643 ORTHO05D001580 1.7e-07 60.5 43 65.1
Nn1g09237 Nelumbo nucifera HOM05D001643 ORTHO05D001580 1.7e-07 60.5 43 60.5
Dinv23945 Davidia involucrata HOM05D001643 ORTHO05D001580 2.2e-07 60.1 42 66.7
HanXRQChr14g0446261 Helianthus annuus HOM05D001643 ORTHO05D001580 2.2e-07 60.1 43 62.8
MD04G1205700 Malus domestica HOM05D001643 ORTHO05D001580 2.2e-07 60.1 48 58.3
ClCG02G015860 Citrullus lanatus HOM05D001643 ORTHO05D001580 2.9e-07 59.7 52 55.8
PSO832G1451 Papaver somniferum HOM05D001643 ORTHO05D001580 2.9e-07 59.7 43 60.5
Sabra13G0025100 Salix brachista HOM05D001643 ORTHO05D001580 2.9e-07 59.7 68 48.5
PGSC0003DMG400003454 Solanum tuberosum HOM05D001643 ORTHO05D001580 2.9e-07 59.7 43 65.1
PGSC0003DMG400022111 Solanum tuberosum HOM05D001643 ORTHO05D001580 2.9e-07 59.7 43 65.1
COL.COLO4_13479 Corchorus olitorius HOM05D001643 ORTHO05D001580 3.8e-07 59.3 43 62.8
Dinv40281 Davidia involucrata HOM05D001643 ORTHO05D001580 3.8e-07 59.3 65 53.8
FvH4_6g05770 Fragaria vesca HOM05D001643 ORTHO05D001580 3.8e-07 59.3 48 58.3
FAN02G2906 Fragaria x ananassa HOM05D001643 ORTHO05D001580 3.8e-07 59.3 48 58.3
FAN14G1623 Fragaria x ananassa HOM05D001643 ORTHO05D001580 3.8e-07 59.3 48 58.3
FAN14G3749 Fragaria x ananassa HOM05D001643 ORTHO05D001580 3.8e-07 59.3 48 58.3
Gohir.D05G065600 Gossypium hirsutum HOM05D001643 ORTHO05D001580 3.8e-07 59.3 68 48.5
Gorai.007G342600 Gossypium raimondii HOM05D001643 ORTHO05D001580 3.8e-07 59.3 43 62.8
SEGI_17444 Sequoiadendron giganteum HOM05D001643 ORTHO05D001580 3.8e-07 59.3 43 58.1
Thecc.05G304400 Theobroma cacao HOM05D001643 ORTHO05D001580 3.8e-07 59.3 43 62.8
CSS0022196 Camellia sinensis var. sinensis HOM05D001643 ORTHO05D001580 5.0e-07 58.9 43 65.1
CDE05G0595 Ceratophyllum demersum HOM05D001643 ORTHO05D001580 5.0e-07 58.9 43 58.1
Oeu054964.1 Olea europaea HOM05D001643 ORTHO05D001580 5.0e-07 58.9 43 62.8
Potri.005G033700 Populus trichocarpa HOM05D001643 ORTHO05D001580 5.0e-07 58.9 43 62.8
Sabra05G0035800 Salix brachista HOM05D001643 ORTHO05D001580 5.0e-07 58.9 43 62.8
MSTRG.7798 Avicennia marina HOM05D001643 ORTHO05D001580 6.5e-07 58.5 43 60.5
Cpa.g.sc48.43 Carica papaya HOM05D001643 ORTHO05D001580 6.5e-07 58.5 68 48.5
MD12G1219900 Malus domestica HOM05D001643 ORTHO05D001580 6.5e-07 58.5 48 54.2
PSO210G4986 Papaver somniferum HOM05D001643 ORTHO05D001580 6.5e-07 58.5 43 60.5
MELO3C004273.2 Cucumis melo HOM05D001643 ORTHO05D001580 8.5e-07 58.2 43 60.5
CsaV3_2G005200 Cucumis sativus L. HOM05D001643 ORTHO05D001580 8.5e-07 58.2 43 60.5
FAN09G2261 Fragaria x ananassa HOM05D001643 ORTHO05D001580 8.5e-07 58.2 48 56.2
PSO210G2302 Papaver somniferum HOM05D001643 ORTHO05D001580 8.5e-07 58.2 43 58.1
Potri.013G023100 Populus trichocarpa HOM05D001643 ORTHO05D001580 8.5e-07 58.2 68 47.1
Sed0026911 Sechium edule HOM05D001643 ORTHO05D001580 8.5e-07 58.2 43 60.5
Thecc.01G279900 Theobroma cacao HOM05D001643 ORTHO05D001580 8.5e-07 58.2 43 60.5
Gohir.A08G210600 Gossypium hirsutum HOM05D001643 ORTHO05D001580 1.1e-06 57.8 68 47.1
Gohir.D08G227400 Gossypium hirsutum HOM05D001643 ORTHO05D001580 1.1e-06 57.8 68 47.1
Gorai.004G241600 Gossypium raimondii HOM05D001643 ORTHO05D001580 1.1e-06 57.8 68 47.1
CANSAT54G0978 Cannabis sativa HOM05D001643 ORTHO05D001580 1.4e-06 57.4 48 56.2
Gorai.006G031500 Gossypium raimondii HOM05D001643 ORTHO05D001580 1.4e-06 57.4 68 47.1
Lsat_1_v5_gn_4_139120 Lactuca sativa HOM05D001643 ORTHO05D001580 1.4e-06 57.4 43 60.5
Lsat_1_v5_gn_2_67460 Lactuca sativa HOM05D001643 ORTHO05D001580 1.9e-06 57.0 47 57.4
Prupe.8G241500 Prunus persica HOM05D001643 ORTHO05D001580 1.9e-06 57.0 47 59.6
Rhsim05G0141900 Rhododendron simsii HOM05D001643 ORTHO05D001580 1.9e-06 57.0 42 64.3
Solyc01g098920.4 Solanum lycopersicum HOM05D001643 ORTHO05D001580 1.9e-06 57.0 94 43.6
Sopen01g042460 Solanum pennellii HOM05D001643 ORTHO05D001580 1.9e-06 57.0 94 43.6
BolC7t44623H Brassica oleracea HOM05D001643 ORTHO05D001580 2.5e-06 56.6 43 58.1
Cpa.g.sc52.32 Carica papaya HOM05D001643 ORTHO05D001580 2.5e-06 56.6 59 49.2
RcHm_v2.0_Chr3g0454681 Rosa chinensis HOM05D001643 ORTHO05D001580 2.5e-06 56.6 64 48.4
Carub.0006s2502 Capsella rubella HOM05D001643 ORTHO05D001580 3.2e-06 56.2 43 58.1
ECA234G2572 Erigeron canadensis HOM05D001643 ORTHO05D001580 3.2e-06 56.2 45 60.0
FAN05G3457 Fragaria x ananassa HOM05D001643 ORTHO05D001580 3.2e-06 56.2 48 54.2
FAN05G4420 Fragaria x ananassa HOM05D001643 ORTHO05D001580 3.2e-06 56.2 48 54.2
Gorai.009G066400 Gossypium raimondii HOM05D001643 ORTHO05D001580 3.2e-06 56.2 68 45.6
Hma1.2p1_0617F.1_g190260 Hydrangea macrophylla HOM05D001643 ORTHO05D001580 3.2e-06 56.2 65 49.2
Peaxi162Scf00037g00031 Petunia axillaris HOM05D001643 ORTHO05D001580 3.2e-06 56.2 42 61.9
Hund21689 Selenicereus undatus HOM05D001643 ORTHO05D001580 3.2e-06 56.2 43 60.5
BcaC03g17791 Brassica carinata HOM05D001643 ORTHO05D001580 4.2e-06 55.8 64 48.4
BcaNung04545 Brassica carinata HOM05D001643 ORTHO05D001580 4.2e-06 55.8 43 58.1
A06p37430 Brassica napus HOM05D001643 ORTHO05D001580 4.2e-06 55.8 43 58.1
C07p40930 Brassica napus HOM05D001643 ORTHO05D001580 4.2e-06 55.8 43 58.1
BolC2t11884H Brassica oleracea HOM05D001643 ORTHO05D001580 4.2e-06 55.8 64 48.4
BraA06t26666Z Brassica rapa HOM05D001643 ORTHO05D001580 4.2e-06 55.8 43 58.1
Duzib138G0894 Durio zibethinus HOM05D001643 ORTHO05D001580 4.2e-06 55.8 68 47.1
Gorai.005G089500 Gossypium raimondii HOM05D001643 ORTHO05D001580 4.2e-06 55.8 43 58.1
Nitab4.5_0006928g0010 Nicotiana tabacum HOM05D001643 ORTHO05D001580 4.2e-06 55.8 42 61.9
Sp2g20720 Schrenkiella parvula HOM05D001643 ORTHO05D001580 4.2e-06 55.8 43 58.1
Ah.06g189300 Amaranthus hybridus HOM05D001643 ORTHO05D001580 5.5e-06 55.5 43 58.1
Aqoxy5G00508 Aquilegia oxysepala HOM05D001643 ORTHO05D001580 5.5e-06 55.5 43 55.8
A02p38660 Brassica napus HOM05D001643 ORTHO05D001580 5.5e-06 55.5 64 48.4
C02p58160 Brassica napus HOM05D001643 ORTHO05D001580 5.5e-06 55.5 64 48.4
BraA02t08842Z Brassica rapa HOM05D001643 ORTHO05D001580 5.5e-06 55.5 64 48.4
Thhalv10003793m.g Eutrema salsugineum HOM05D001643 ORTHO05D001580 5.5e-06 55.5 64 48.4
Manes.09G166600 Manihot esculenta HOM05D001643 ORTHO05D001580 5.5e-06 55.5 59 49.2
Mapoly0089s0014 Marchantia polymorpha HOM05D001643 ORTHO05D001580 5.5e-06 55.5 44 52.3
Sed0017328 Sechium edule HOM05D001643 ORTHO05D001580 5.5e-06 55.5 43 58.1
SGA_v2.0_scaffold302G47811 Striga asiatica HOM05D001643 ORTHO05D001580 5.5e-06 55.5 42 59.5
Actinidia24642 Actinidia chinensis HOM05D001643 ORTHO05D001580 7.2e-06 55.1 43 60.5
Ah.04g160240 Amaranthus hybridus HOM05D001643 ORTHO05D001580 7.2e-06 55.1 43 60.5
Ciclev10000541m.g Citrus clementina HOM05D001643 ORTHO05D001580 7.2e-06 55.1 58 50.0
SalBow2G3025 Salvia bowleyana HOM05D001643 ORTHO05D001580 7.2e-06 55.1 42 59.5
SEGI_28692 Sequoiadendron giganteum HOM05D001643 ORTHO05D001580 7.2e-06 55.1 42 52.4
Manes.05G075900 Manihot esculenta HOM05D001643 ORTHO05D001580 9.4e-06 54.7 67 44.8
TWI56G1494 Tripterygium wilfordii HOM05D001643 ORTHO05D001580 9.4e-06 54.7 43 58.1


User provided reference genes

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