Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032990001 Vitis vinifera HOM05D006071 ORTHO05D007462 0.0e+00 1331.6 686 100.0
Dinv33279 Davidia involucrata HOM05D006071 ORTHO05D007462 2.5e-255 885.6 770 63.8
QL02p069613 Quercus lobata HOM05D006071 ORTHO05D007462 8.6e-232 807.4 746 61.7
Haze_14947 Corylus avellana HOM05D006071 ORTHO05D007462 5.2e-229 798.1 812 56.3
Potri.014G145300 Populus trichocarpa HOM05D006071 ORTHO05D007462 3.1e-221 772.3 758 57.8
Thecc.04G047500 Theobroma cacao HOM05D006071 ORTHO05D007462 2.0e-220 769.6 774 57.8
TWI32G0148 Tripterygium wilfordii HOM05D006071 ORTHO05D007462 4.9e-219 765.0 774 57.1
FAN09G3006 Fragaria x ananassa HOM05D006071 ORTHO05D007462 7.4e-215 751.1 774 56.5
Gohir.D10G081100 Gossypium hirsutum HOM05D006071 ORTHO05D007462 2.1e-214 749.6 771 56.2
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 8.1e-214 747.7 770 56.0
Manes.11G077000 Manihot esculenta HOM05D006071 ORTHO05D007462 2.4e-213 746.1 765 57.3
TAR629G1421 Trochodendron aralioides HOM05D006071 ORTHO05D007462 4.0e-213 745.3 756 58.6
RcHm_v2.0_Chr2g0176461 Rosa chinensis HOM05D006071 ORTHO05D007462 2.6e-212 742.7 726 58.8
Gorai.011G088400 Gossypium raimondii HOM05D006071 ORTHO05D007462 5.8e-212 741.5 773 55.9
MD17G1007100 Malus domestica HOM05D006071 ORTHO05D007462 9.9e-212 740.7 777 54.6
Prupe.3G313200 Prunus persica HOM05D006071 ORTHO05D007462 9.9e-212 740.7 768 55.7
Lju41A60G26 Lonicera japonica HOM05D006071 ORTHO05D007462 1.4e-210 736.9 771 55.5
Rhsim10G0001400 Rhododendron simsii HOM05D006071 ORTHO05D007462 7.1e-210 734.6 766 54.8
CANSAT64G2805 Cannabis sativa HOM05D006071 ORTHO05D007462 6.0e-209 731.5 774 55.4
Ciclev10014332m.g Citrus clementina HOM05D006071 ORTHO05D007462 6.0e-209 731.5 822 52.3
Gohir.A10G070000 Gossypium hirsutum HOM05D006071 ORTHO05D007462 1.1e-207 727.2 780 55.1
FAN14G4217 Fragaria x ananassa HOM05D006071 ORTHO05D007462 9.6e-207 724.2 807 54.2
TPR.G10339 Trifolium pratense HOM05D006071 ORTHO05D007462 1.1e-205 720.7 767 55.1
Duzib187G0315 Durio zibethinus HOM05D006071 ORTHO05D007462 1.2e-204 717.2 771 54.7
vmacro22244 Vaccinium macrocarpon HOM05D006071 ORTHO05D007462 3.8e-203 712.2 703 56.9
Lalb_Chr24g0403151 Lupinus albus HOM05D006071 ORTHO05D007462 1.6e-201 706.8 770 54.9
ClCG05G012640 Citrullus lanatus HOM05D006071 ORTHO05D007462 3.5e-201 705.7 753 55.0
arahy.Tifrunner.gnm1.ann1.FMKW1Y Arachis hypogaea HOM05D006071 ORTHO05D007462 6.0e-201 704.9 774 54.0
Nn4g22141 Nelumbo nucifera HOM05D006071 ORTHO05D007462 1.0e-200 704.1 695 55.8
arahy.Tifrunner.gnm1.ann1.FR25D6 Arachis hypogaea HOM05D006071 ORTHO05D007462 8.7e-200 701.0 774 53.9
MELO3C014817.2 Cucumis melo HOM05D006071 ORTHO05D007462 2.5e-199 699.5 764 55.1
CsaV3_3G027770 Cucumis sativus L. HOM05D006071 ORTHO05D007462 2.8e-198 696.0 755 54.8
Medtr7g084020 Medicago truncatula HOM05D006071 ORTHO05D007462 4.8e-198 695.3 770 53.8
PGR142G0457 Punica granatum HOM05D006071 ORTHO05D007462 5.3e-197 691.8 767 53.1
Ca_08138_v3 Cicer arietinum L. HOM05D006071 ORTHO05D007462 5.9e-196 688.3 770 53.6
Hund04198 Selenicereus undatus HOM05D006071 ORTHO05D007462 5.9e-196 688.3 758 53.0
EL10Ac6g13395 Beta vulgaris HOM05D006071 ORTHO05D007462 7.6e-196 688.0 763 53.2
Sed0023591 Sechium edule HOM05D006071 ORTHO05D007462 1.3e-195 687.2 754 54.9
Phvul.001G084800 Phaseolus vulgaris HOM05D006071 ORTHO05D007462 5.0e-195 685.3 701 56.9
CSS0001742 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 6.5e-195 684.9 569 63.1
Ah.03g136370 Amaranthus hybridus HOM05D006071 ORTHO05D007462 4.2e-194 682.2 755 52.7
CiPaw.03G002300 Carya illinoinensis HOM05D006071 ORTHO05D007462 9.3e-194 681.0 603 61.5
Glyma.19G103000 Glycine max HOM05D006071 ORTHO05D007462 1.2e-193 680.6 770 53.9
MBI07_g41894_MAGBIO Magnolia biondii HOM05D006071 ORTHO05D007462 7.9e-193 677.9 810 51.2
MD09G1003000 Malus domestica HOM05D006071 ORTHO05D007462 1.6e-190 670.2 727 53.9
VMungo1383G1903 Vigna mungo HOM05D006071 ORTHO05D007462 2.8e-190 669.5 765 52.7
Lj1g0026027 Lotus japonicus HOM05D006071 ORTHO05D007462 1.4e-189 667.2 724 53.5
Sabra14G0109500 Salix brachista HOM05D006071 ORTHO05D007462 1.4e-189 667.2 786 51.5
Lsat_1_v5_gn_0_22580 Lactuca sativa HOM05D006071 ORTHO05D007462 2.2e-187 659.8 753 53.1
ECA246G2252 Erigeron canadensis HOM05D006071 ORTHO05D007462 1.9e-186 656.8 758 53.2
MSTRG.15572 Avicennia marina HOM05D006071 ORTHO05D007462 7.2e-186 654.8 761 51.2
HanXRQChr17g0550941 Helianthus annuus HOM05D006071 ORTHO05D007462 2.7e-185 652.9 750 53.1
Sc07g0003750 Simmondsia chinensis HOM05D006071 ORTHO05D007462 1.4e-184 650.6 758 51.7
Glyma.16G048700 Glycine max HOM05D006071 ORTHO05D007462 3.0e-184 649.4 672 55.8
Cc07_g01250 Coffea canephora HOM05D006071 ORTHO05D007462 5.1e-184 648.7 769 51.1
Oeu003415.3 Olea europaea HOM05D006071 ORTHO05D007462 1.1e-183 647.5 773 51.6
DCAR_014471 Daucus carota HOM05D006071 ORTHO05D007462 2.8e-182 642.9 693 55.7
SGA_v2.0_scaffold47G17632 Striga asiatica HOM05D006071 ORTHO05D007462 6.5e-179 631.7 755 52.1
FvH4_6g54271 Fragaria vesca HOM05D006071 ORTHO05D007462 1.9e-178 630.2 659 56.0
Eucgr.I01601 Eucalyptus grandis HOM05D006071 ORTHO05D007462 4.2e-178 629.0 729 52.7
PSO017G0597 Papaver somniferum HOM05D006071 ORTHO05D007462 7.2e-178 628.2 779 49.4
Peaxi162Scf00420g00836 Petunia axillaris HOM05D006071 ORTHO05D007462 7.2e-178 628.2 695 53.8
PSO478G4855 Papaver somniferum HOM05D006071 ORTHO05D007462 1.6e-177 627.1 779 49.4
Actinidia36244 Actinidia chinensis HOM05D000877 ORTHO05D001509 2.1e-177 626.7 672 54.3
FAN02G4165 Fragaria x ananassa HOM05D006071 ORTHO05D007462 1.4e-176 624.0 572 58.9
Migut.K01485 Erythranthe guttata HOM05D006071 ORTHO05D007462 1.8e-176 623.6 764 50.5
Aqoxy5G03151 Aquilegia oxysepala HOM05D006071 ORTHO05D007462 2.4e-173 613.2 734 49.9
Nitab4.5_0002172g0120 Nicotiana tabacum HOM05D006071 ORTHO05D007462 7.0e-173 611.7 707 52.6
AUR62037834 Chenopodium quinoa HOM05D006071 ORTHO05D007462 2.6e-172 609.8 721 52.0
Aa31LG2G5830 Aethionema arabicum HOM05D006071 ORTHO05D007462 5.9e-172 608.6 782 48.8
Nitab4.5_0000519g0320 Nicotiana tabacum HOM05D006071 ORTHO05D007462 6.5e-171 605.1 774 50.0
THA.LOC104805300 Tarenaya hassleriana HOM05D006071 ORTHO05D007462 2.1e-169 600.1 778 49.7
Thhalv10003691m.g Eutrema salsugineum HOM05D006071 ORTHO05D007462 1.0e-168 597.8 787 48.5
Sopen02g039190 Solanum pennellii HOM05D006071 ORTHO05D007462 1.0e-168 597.8 622 54.8
ATR0582G122 Amborella trichopoda HOM05D006071 ORTHO05D007462 8.2e-166 588.2 785 46.6
Carub.0005s0473 Capsella rubella HOM05D006071 ORTHO05D007462 8.2e-166 588.2 781 47.4
AT3G26730 Arabidopsis thaliana HOM05D006071 ORTHO05D007462 1.4e-165 587.4 790 47.2
Sp2g15850 Schrenkiella parvula HOM05D006071 ORTHO05D007462 5.3e-165 585.5 776 48.2
BcaB07g30217 Brassica carinata HOM05D006071 ORTHO05D007462 2.0e-164 583.6 685 50.7
CARHR147750 Cardamine hirsuta HOM05D006071 ORTHO05D007462 7.7e-164 581.6 785 47.4
Hma1.2p1_0421F.1_g149975 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 8.0e-161 571.6 441 65.3
BraA02t08478Z Brassica rapa HOM05D006071 ORTHO05D007462 4.0e-160 569.3 787 47.0
AL5G15580 Arabidopsis lyrata HOM05D006071 ORTHO05D007462 1.5e-159 567.4 789 45.8
A02p34700 Brassica napus HOM05D006071 ORTHO05D007462 5.7e-159 565.5 789 47.1
C02p53260 Brassica napus HOM05D006071 ORTHO05D007462 1.2e-156 557.8 783 46.6
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 1.3e-155 554.3 779 46.5
CDE05G0431 Ceratophyllum demersum HOM05D000877 ORTHO05D001509 6.5e-155 552.0 759 44.9
BolC2t11398H Brassica oleracea HOM05D006071 ORTHO05D007462 9.5e-154 548.1 772 46.2
Os02g0516600 Oryza sativa ssp. japonica HOM05D006071 ORTHO05D007462 1.7e-150 537.3 769 45.4
Zm00001eb242020 Zea mays HOM05D006071 ORTHO05D007462 2.0e-143 513.8 768 44.1
Hma1.2p1_0033F.1_g021090 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 1.7e-139 500.7 498 56.0
COL.COLO4_13369 Corchorus olitorius HOM05D006071 ORTHO05D007462 1.1e-138 498.0 685 48.3
HPP92_024403 Vanilla planifolia HOM05D006071 ORTHO05D007462 2.5e-138 496.9 694 45.5
Atru.chr6.2689 Acer truncatum HOM05D006071 ORTHO05D007462 2.0e-127 460.7 419 60.4
Psat3g093480 Pisum sativum HOM05D006071 ORTHO05D007462 3.0e-123 446.8 483 54.0
unitig_0.g2406 Utricularia gibba HOM05D006071 ORTHO05D007462 3.5e-116 423.3 610 46.6
SEGI_23511 Sequoiadendron giganteum HOM05D006071 ORTHO05D007462 3.0e-115 420.2 833 37.7
AUR62041072 Chenopodium quinoa HOM05D006071 ORTHO05D007462 1.1e-109 401.7 542 47.2
Duzib147G1044 Durio zibethinus HOM05D006071 ORTHO05D007462 1.6e-108 397.9 574 44.3
CSS0035612 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 2.4e-101 374.0 423 53.0
Mapoly0006s0082 Marchantia polymorpha HOM05D006071 ORTHO05D007462 6.0e-100 369.4 700 36.1
SMO141G0304 Selaginella moellendorffii HOM05D006071 ORTHO05D007462 3.3e-98 363.6 751 36.4
Pp3c20_8910 Physcomitrium patens HOM05D006071 ORTHO05D007462 9.3e-93 345.5 754 34.6
SHI11389 Sapria himalayana HOM05D006071 ORTHO05D007462 2.3e-83 314.3 480 42.9
Solyc02g094510.4 Solanum lycopersicum HOM05D006071 ORTHO05D007462 4.1e-80 303.5 291 58.4
AagrBONN_evm.TU.Sc2ySwM_344.4297 Anthoceros agrestis HOM05D006071 ORTHO05D007462 1.0e-62 245.7 702 32.1
CBR_g4363 Chara braunii HOM05D006071 ORTHO05D007462 2.2e-62 244.6 800 28.0
AUR62041071 Chenopodium quinoa HOM05D006071 ORTHO05D007462 1.1e-58 232.3 225 59.6
Psat2g087400 Pisum sativum HOM05D006071 ORTHO05D007462 1.4e-56 225.3 318 45.6
Psat2g052360 Pisum sativum HOM05D006071 ORTHO05D007462 7.5e-50 203.0 384 38.5
CDE05G1324 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 1.8e-48 198.4 233 47.2
Atru.chr6.2690 Acer truncatum HOM05D006071 ORTHO05D007462 1.9e-45 188.3 215 55.8
HanXRQChr17g0550971 Helianthus annuus HOM05D006071 ORTHO05D007462 4.0e-43 180.6 189 52.9
HanXRQChr17g0550951 Helianthus annuus HOM05D006071 ORTHO05D007462 3.3e-37 161.0 245 48.6
Psat0s2046g0080 Pisum sativum HOM05D006071 ORTHO05D007462 1.4e-32 145.6 143 55.2
Psat2g087520 Pisum sativum HOM05D006071 ORTHO05D007462 4.0e-27 127.5 144 52.1
Cre03.g144687 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 5.0e-22 110.5 150 43.3
Sc07g0003760 Simmondsia chinensis HOM05D006071 ORTHO05D007462 3.3e-21 107.8 122 47.5
Atru.chr6.2688 Acer truncatum HOM05D006071 ORTHO05D007462 1.6e-20 105.5 97 60.8
Lj1g0013684 Lotus japonicus HOM05D006071 ORTHO05D007462 6.8e-19 100.1 124 50.8
MCO15G395 Micromonas commoda HOM05D006071 ORTHO05D007462 1.5e-18 99.0 122 38.5
Actinidia09845 Actinidia chinensis HOM05D006071 ORTHO05D007462 4.9e-17 94.0 87 56.3
Actinidia09844 Actinidia chinensis HOM05D006071 ORTHO05D007462 7.0e-16 90.1 74 59.5
CDE05G2071 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 5.6e-13 80.5 114 45.6
Psat0s2046g0120 Pisum sativum HOM05D006071 ORTHO05D007462 1.8e-11 75.5 270 28.1
unitig_0.g2405 Utricularia gibba HOM05D006071 ORTHO05D007462 1.7e-09 68.9 100 50.0
Cre16.g681251 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 3.9e-06 57.8 72 40.3
Cpa.g.sc70.72 Carica papaya HOM05D006071 ORTHO05D007462 6.6e-06 57.0 63 47.6


User provided reference genes

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