Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 9.7e-149 530.0 250 100.0
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 4.2e-128 461.5 250 86.8
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 4.7e-127 458.0 249 86.3
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 2.3e-126 455.7 250 85.2
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 7.5e-125 450.7 248 84.3
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.7e-124 449.5 250 84.0
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 6.3e-124 447.6 250 82.0
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 4.1e-123 444.9 250 82.4
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 1.6e-122 443.0 250 82.0
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 3.8e-121 438.3 250 80.4
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 3.8e-121 438.3 250 80.4
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.0e-121 438.0 250 81.6
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 6.6e-121 437.6 251 81.3
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 8.6e-121 437.2 250 81.6
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 8.6e-121 437.2 250 81.6
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.5e-120 436.4 250 81.2
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.9e-120 436.0 251 80.9
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 3.3e-120 435.3 250 80.0
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 4.7e-119 431.4 250 79.6
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.0e-118 430.3 250 79.2
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 1.4e-118 429.9 251 79.3
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 1.8e-118 429.5 251 80.9
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.8e-118 429.5 250 78.4
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 3.0e-118 428.7 250 80.0
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 4.0e-118 428.3 251 78.9
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 5.2e-118 427.9 250 79.6
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.2e-117 426.8 250 79.6
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 2.0e-117 426.0 250 79.2
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 3.4e-117 425.2 251 78.1
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 5.7e-117 424.5 251 78.1
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 1.7e-116 422.9 251 77.3
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 2.2e-116 422.5 250 78.8
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 1.8e-115 419.5 250 77.6
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 2.4e-115 419.1 251 78.1
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 7.0e-115 417.5 250 78.4
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 2.0e-114 416.0 250 77.2
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 3.9e-113 411.8 252 76.2
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 5.0e-113 411.4 250 76.8
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 6.6e-113 411.0 252 75.8
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 1.5e-112 409.8 250 78.0
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 1.9e-112 409.5 249 75.1
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 5.6e-112 407.9 250 77.6
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 1.4e-110 403.3 254 74.0
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 3.1e-110 402.1 250 74.0
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 4.0e-110 401.7 250 73.6
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 5.2e-110 401.4 250 75.2
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 8.9e-110 400.6 250 74.8
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 2.6e-109 399.1 252 74.2
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 5.8e-109 397.9 250 73.2
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 7.5e-109 397.5 250 71.2
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 7.5e-109 397.5 250 75.2
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.3e-108 396.7 250 74.0
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 2.2e-108 396.0 250 74.0
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 2.9e-108 395.6 250 72.4
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 4.9e-108 394.8 252 72.6
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 6.4e-108 394.4 250 72.0
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 8.3e-108 394.0 252 73.0
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 1.4e-107 393.3 250 73.2
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 2.4e-107 392.5 250 71.6
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 5.4e-107 391.3 250 73.6
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 7.0e-107 391.0 252 72.6
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 7.0e-107 391.0 252 71.0
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 7.8e-106 387.5 252 72.2
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 1.3e-105 386.7 250 74.8
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 3.9e-105 385.2 245 74.7
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 5.0e-105 384.8 252 71.0
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 1.9e-104 382.9 245 75.1
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 1.9e-104 382.9 252 70.6
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 5.6e-104 381.3 250 69.2
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 7.3e-104 380.9 250 71.6
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 2.8e-103 379.0 228 77.2
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 6.8e-102 374.4 250 73.2
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 9.8e-101 370.5 252 69.4
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 2.2e-100 369.4 250 68.8
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 3.7e-100 368.6 249 68.7
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 1.9e-99 366.3 250 66.4
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 5.4e-99 364.8 238 70.2
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 7.1e-99 364.4 250 67.6
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 9.2e-99 364.0 252 67.1
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 7.8e-98 360.9 252 66.3
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 1.0e-97 360.5 250 67.6
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 1.7e-97 359.8 252 65.9
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 1.7e-97 359.8 252 65.9
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 1.7e-97 359.8 252 65.9
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 1.7e-97 359.8 252 65.9
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 2.3e-97 359.4 252 65.9
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 1.1e-96 357.1 253 68.0
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 7.3e-96 354.4 251 66.1
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 2.1e-95 352.8 252 64.3
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 2.1e-95 352.8 251 64.9
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 2.8e-95 352.4 252 64.3
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 2.8e-95 352.4 262 64.5
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 6.2e-95 351.3 252 65.1
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 6.2e-95 351.3 252 64.7
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 3.1e-94 349.0 249 62.7
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 5.2e-94 348.2 252 65.5
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 5.2e-94 348.2 203 78.3
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 3.3e-88 328.9 240 60.8
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 2.8e-87 325.9 250 58.8
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 8.7e-81 304.3 247 59.1
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 1.6e-79 300.1 248 58.5
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 8.1e-79 297.7 245 58.8
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.3e-76 290.4 247 57.5
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 3.8e-76 288.9 247 57.1
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 1.6e-74 283.5 250 52.8
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.2e-68 263.1 154 76.0
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 2.7e-66 256.1 267 48.7
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 3.9e-65 252.3 251 47.8
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 5.6e-64 248.4 139 85.6
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 1.5e-56 223.8 288 48.3
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.2e-53 214.2 259 47.1
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 4.2e-51 205.7 111 84.7
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 4.5e-45 185.7 103 85.4
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 1.6e-34 150.6 95 72.6
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 1.3e-28 131.0 100 69.0
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 1.1e-27 127.9 70 74.3
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 1.2e-21 107.8 153 47.1
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 7.7e-21 105.1 54 79.6
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 4.7e-18 95.9 51 74.5
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 4.5e-13 79.3 45 77.8
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 4.0e-09 66.2 186 24.7
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 2.0e-08 63.9 165 29.7
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 2.2e-07 60.5 120 33.3
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 3.1e-06 56.6 110 30.9


User provided reference genes

Program Settings