Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 0.0e+00 1234.9 660 100.0
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 6.0e-206 721.5 637 66.9
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 7.4e-196 688.0 654 63.9
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 2.1e-190 669.8 637 64.1
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 1.6e-187 660.2 626 64.7
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 1.2e-185 654.1 628 62.3
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 1.7e-184 650.2 623 63.9
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 1.9e-183 646.7 500 72.2
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 3.2e-183 646.0 626 62.0
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 7.4e-180 634.8 635 61.9
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 1.8e-178 630.2 642 61.7
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 1.7e-176 623.6 632 60.9
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 6.5e-176 621.7 629 61.7
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 1.6e-174 617.1 708 56.2
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 7.9e-174 614.8 635 59.8
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.3e-171 607.4 649 58.6
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 6.9e-170 601.7 635 59.5
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.0e-168 597.8 649 58.6
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 8.5e-168 594.7 634 59.5
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 1.8e-165 587.0 679 56.8
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 4.4e-164 582.4 466 70.6
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 4.4e-164 582.4 630 58.3
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 2.2e-163 580.1 644 58.2
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 3.7e-163 579.3 630 58.3
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 9.1e-162 574.7 631 59.1
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 1.5e-161 573.9 647 56.3
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 2.9e-160 569.7 671 55.7
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 5.0e-160 568.9 593 61.2
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 5.0e-160 568.9 630 58.3
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 6.5e-160 568.5 630 58.7
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 5.5e-159 565.5 627 59.3
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 1.0e-157 561.2 678 54.9
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 5.2e-157 558.9 621 57.0
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 5.7e-156 555.4 636 56.1
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 1.3e-155 554.3 694 53.9
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 7.7e-153 545.0 622 55.0
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 7.7e-153 545.0 495 66.1
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 1.0e-152 544.7 619 57.5
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 8.5e-152 541.6 641 56.2
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 3.2e-151 539.7 672 54.3
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 6.7e-149 531.9 623 54.4
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 6.7e-149 531.9 628 55.4
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 1.5e-148 530.8 626 55.9
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 3.3e-148 529.6 536 60.8
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 5.7e-148 528.9 703 52.2
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 5.7e-148 528.9 626 55.3
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 9.7e-148 528.1 491 64.4
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 1.7e-147 527.3 625 54.9
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 4.1e-146 522.7 614 55.4
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 2.0e-145 520.4 628 56.1
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 2.2e-144 516.9 774 47.5
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 1.5e-143 514.2 613 54.2
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 3.2e-143 513.1 774 47.4
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 1.6e-142 510.8 606 53.0
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 2.7e-142 510.0 550 57.6
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 3.8e-136 489.6 490 61.2
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 3.8e-136 489.6 628 53.7
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 8.6e-136 488.4 488 59.8
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 1.5e-135 487.6 620 53.7
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 1.5e-135 487.6 624 51.9
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 2.5e-135 486.9 649 50.4
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 2.8e-134 483.4 676 50.1
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 4.7e-134 482.6 522 58.0
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 1.0e-133 481.5 393 71.2
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 4.0e-133 479.6 618 51.5
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 4.0e-133 479.6 487 60.6
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 1.2e-132 478.0 478 60.7
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 3.4e-132 476.5 455 60.7
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 4.4e-132 476.1 592 52.9
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 4.4e-132 476.1 584 53.9
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 1.7e-131 474.2 619 52.7
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 4.9e-131 472.6 584 53.8
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 1.4e-130 471.1 654 50.0
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 2.7e-129 466.8 647 50.1
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 4.5e-129 466.1 557 54.4
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 8.6e-128 461.8 683 46.6
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 1.8e-125 454.1 596 52.2
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 4.4e-124 449.5 489 56.2
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 7.0e-122 442.2 623 49.3
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 2.7e-121 440.3 594 51.5
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 4.6e-121 439.5 594 50.2
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 6.0e-121 439.1 672 46.9
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 3.9e-120 436.4 594 50.0
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 5.6e-119 432.6 807 42.1
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 1.2e-118 431.4 598 52.7
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 8.0e-118 428.7 602 50.7
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 1.8e-117 427.6 630 47.0
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 5.2e-117 426.0 596 50.5
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 5.2e-117 426.0 602 50.5
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 5.2e-117 426.0 602 50.5
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 1.7e-115 421.0 477 54.5
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 3.0e-112 410.2 535 51.2
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 7.1e-106 389.0 371 62.0
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 2.0e-100 370.9 397 57.4
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 9.9e-100 368.6 621 41.2
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 9.6e-95 352.1 436 55.0
MBI19_g00631_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 3.6e-94 350.1 271 70.8
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 8.4e-91 339.0 410 54.6
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 8.4e-91 339.0 410 54.6
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 1.3e-88 331.6 253 71.5
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 9.0e-85 318.9 617 40.4
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 1.2e-81 308.5 383 55.9
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 1.2e-81 308.5 301 60.1
MD09G1066300 Malus domestica HOM05D006007 ORTHO05D007518 1.3e-70 271.9 248 64.5
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 3.7e-70 270.4 480 41.9
Sc10g0004660 Simmondsia chinensis HOM05D006007 ORTHO05D007518 1.2e-68 265.4 252 61.9
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 4.9e-67 260.0 382 47.9
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 2.5e-63 247.7 384 47.1
CDE05G1269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 4.1e-61 240.4 229 58.5
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 8.8e-56 222.6 434 39.9
Hma1.2p1_0481F.1_g162130 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 2.0e-55 221.5 162 71.6
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 2.0e-44 184.9 242 51.2
Os03g0213900 Oryza sativa ssp. japonica HOM05D006007 ORTHO05D007518 7.7e-44 183.0 160 60.6
SEGI_00365 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 7.7e-36 156.4 129 65.1
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 5.5e-34 150.2 138 60.9
SHI25684 Sapria himalayana HOM05D006007 ORTHO05D007518 1.0e-32 146.0 191 48.2
BraA09t36042Z Brassica rapa HOM05D006007 ORTHO05D007518 2.3e-32 144.8 99 74.7
A09p04060 Brassica napus HOM05D006007 ORTHO05D010543 1.1e-29 136.0 99 71.7
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 6.5e-27 126.7 169 50.3
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 4.2e-26 124.0 276 39.9
Cre09.g389900 Chlamydomonas reinhardtii HOM05D006007 ORTHO05D007518 4.0e-24 117.5 349 29.5
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 3.3e-18 97.8 257 34.2
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 4.9e-14 84.0 142 43.0
GSVIVG01036834001 Vitis vinifera HOM05D002081 ORTHO05D007518 8.3e-14 83.2 51 86.3
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 7.0e-13 80.1 70 65.7
Cpa.g.sc14.174 Carica papaya HOM05D006007 ORTHO05D007518 7.8e-12 76.6 108 45.4
CARHR153030 Cardamine hirsuta HOM05D006007 ORTHO05D007518 5.6e-10 70.5 73 56.2
Oeu051017.1 Olea europaea HOM05D020362 ORTHO05D030297 1.2e-07 62.8 132 42.4


User provided reference genes

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