Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 1.4e-141 506.5 261 100.0
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 1.8e-48 197.2 262 46.6
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 1.0e-43 181.4 307 40.1
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 2.3e-43 180.3 280 40.0
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 6.3e-41 172.2 266 42.5
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 1.2e-39 167.9 305 39.0
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 1.5e-39 167.5 272 38.6
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 1.3e-38 164.5 264 39.4
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 1.7e-38 164.1 263 38.0
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 2.9e-38 163.3 256 39.5
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 1.5e-37 161.0 298 37.2
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 3.0e-35 153.3 262 36.3
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 9.7e-34 148.3 205 43.9
Cpa.g.sc19.55 Carica papaya HOM05D003589 ORTHO05D005170 1.3e-33 147.9 261 38.3
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 1.7e-33 147.5 197 38.1
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 4.8e-33 146.0 180 42.2
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 6.3e-33 145.6 176 41.5
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 1.8e-32 144.1 184 45.7
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.2e-31 141.4 193 42.5
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.6e-31 141.0 261 36.4
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 2.6e-31 140.2 200 40.0
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 3.5e-31 139.8 155 49.0
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 5.9e-31 139.0 189 40.7
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 7.7e-31 138.7 182 40.1
CANSAT56G1879 Cannabis sativa HOM05D003589 ORTHO05D005170 2.9e-30 136.7 285 37.5
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 2.9e-30 136.7 179 44.7
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 5.0e-30 136.0 259 36.7
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 6.5e-30 135.6 288 39.9
Peaxi162Scf00167g01218 Petunia axillaris HOM05D003589 ORTHO05D005170 6.5e-30 135.6 225 37.8
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.1e-29 134.8 269 33.8
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.5e-29 134.4 217 37.8
TWI74G0182 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 1.5e-29 134.4 292 34.9
Duzib114G0452 Durio zibethinus HOM05D003589 ORTHO05D005170 1.9e-29 134.0 200 41.0
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 1.9e-29 134.0 269 36.1
MSTRG.5498 Avicennia marina HOM05D003589 ORTHO05D005170 2.5e-29 133.7 279 31.2
Lj8A54T74 Lonicera japonica HOM05D003589 ORTHO05D005170 3.2e-29 133.3 199 39.7
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 5.5e-29 132.5 162 46.9
TWI77G0120 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 1.6e-28 131.0 297 34.3
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 2.1e-28 130.6 182 42.3
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 2.7e-28 130.2 292 33.9
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 4.7e-28 129.4 313 32.9
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 6.1e-28 129.0 266 34.2
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 8.0e-28 128.6 176 40.9
Migut.J00036 Erythranthe guttata HOM05D003589 ORTHO05D005170 1.8e-27 127.5 230 35.7
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 2.3e-27 127.1 222 38.7
Manes.10G001600 Manihot esculenta HOM05D003589 ORTHO05D005170 2.3e-27 127.1 212 38.7
Sopen05g030750 Solanum pennellii HOM05D003589 ORTHO05D005170 3.0e-27 126.7 267 35.2
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 5.2e-27 125.9 185 41.1
Cc02_g05350 Coffea canephora HOM05D003589 ORTHO05D005170 6.8e-27 125.6 183 43.2
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 6.8e-27 125.6 184 38.6
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 8.8e-27 125.2 297 34.3
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 8.8e-27 125.2 299 32.8
Solyc05g052210.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 8.8e-27 125.2 267 35.2
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 1.2e-26 124.8 316 32.0
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.0e-26 124.0 253 34.8
PGSC0003DMG400011643 Solanum tuberosum HOM05D003589 ORTHO05D005170 2.0e-26 124.0 267 35.6
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 3.4e-26 123.2 198 39.4
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 4.4e-26 122.9 272 34.6
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 5.7e-26 122.5 153 45.1
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 5.7e-26 122.5 172 41.9
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 7.5e-26 122.1 267 36.0
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 1.7e-25 120.9 152 44.1
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 1.7e-25 120.9 185 40.5
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 1.7e-25 120.9 216 38.4
EL10Ac7g17103 Beta vulgaris HOM05D003589 ORTHO05D005170 2.8e-25 120.2 179 36.9
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 4.8e-25 119.4 179 38.5
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 4.8e-25 119.4 183 39.9
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 4.8e-25 119.4 203 41.4
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 6.3e-25 119.0 294 33.0
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 6.3e-25 119.0 282 34.4
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 8.3e-25 118.6 277 31.0
MSTRG.169 Avicennia marina HOM05D003589 ORTHO05D005170 1.4e-24 117.9 262 33.6
Nitab4.5_0000375g0230 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.4e-24 117.9 269 35.3
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 4.1e-24 116.3 179 36.3
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 4.1e-24 116.3 153 43.8
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 5.4e-24 115.9 177 37.9
Cpa.g.sc86.55 Carica papaya HOM05D003589 ORTHO05D005170 1.2e-23 114.8 147 42.2
DCAR_018039 Daucus carota HOM05D003589 ORTHO05D005170 2.0e-23 114.0 197 36.5
Lj1g0021012 Lotus japonicus HOM05D003589 ORTHO05D005170 2.7e-23 113.6 208 34.1
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 4.5e-23 112.8 183 36.6
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 5.9e-23 112.5 212 35.8
TPR.G14123 Trifolium pratense HOM05D003589 ORTHO05D005170 7.7e-23 112.1 145 40.0
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 1.0e-22 111.7 234 35.9
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.0e-22 111.7 262 32.4
VMungo1383G2329 Vigna mungo HOM05D003589 ORTHO05D005170 1.0e-22 111.7 295 30.2
Migut.F01242 Erythranthe guttata HOM05D003589 ORTHO05D005170 2.9e-22 110.2 265 33.6
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 3.8e-22 109.8 89 53.9
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 3.8e-22 109.8 260 31.9
DCAR_014664 Daucus carota HOM05D003589 ORTHO05D005170 8.5e-22 108.6 179 37.4
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 1.1e-21 108.2 181 33.1
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.1e-21 108.2 219 33.8
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.1e-21 108.2 219 33.8
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.1e-21 108.2 219 33.8
COL.COLO4_19418 Corchorus olitorius HOM05D003589 ORTHO05D005170 1.5e-21 107.8 205 37.1
Sabra04G0153600 Salix brachista HOM05D003589 ORTHO05D005170 4.2e-21 106.3 166 36.7
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 4.2e-21 106.3 234 32.9
Lsat_1_v5_gn_2_126280 Lactuca sativa HOM05D003589 ORTHO05D005170 5.5e-21 105.9 201 35.3
Oeu057998.1 Olea europaea HOM05D003589 ORTHO05D005170 5.5e-21 105.9 90 55.6
Oeu006056.1 Olea europaea HOM05D003589 ORTHO05D005170 7.2e-21 105.5 145 38.6
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 1.2e-20 104.8 182 34.6
HanXRQChr07g0204121 Helianthus annuus HOM05D003589 ORTHO05D005170 2.7e-20 103.6 193 37.3
Phvul.008G082600 Phaseolus vulgaris HOM05D003589 ORTHO05D005170 2.7e-20 103.6 183 33.3
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 2.7e-20 103.6 219 33.8
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 3.6e-20 103.2 234 31.6
HPP92_015592 Vanilla planifolia HOM05D003589 ORTHO05D005170 6.1e-20 102.4 191 35.1
AUR62029766 Chenopodium quinoa HOM05D003589 ORTHO05D005170 8.0e-20 102.1 263 30.8
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.0e-19 101.7 149 39.6
Glyma.18G213700 Glycine max HOM05D003589 ORTHO05D005170 2.3e-19 100.5 212 34.0
Medtr7g073280 Medicago truncatula HOM05D003589 ORTHO05D005170 2.3e-19 100.5 320 27.2
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.0e-19 100.1 228 33.8
Sabra19G0073800 Salix brachista HOM05D003589 ORTHO05D005170 5.2e-19 99.4 170 38.2
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.2e-18 98.2 231 33.3
AL5G32020 Arabidopsis lyrata HOM05D003589 ORTHO05D005170 3.4e-18 96.7 228 35.1
AUR62006418 Chenopodium quinoa HOM05D003589 ORTHO05D005170 3.4e-18 96.7 321 29.0
Sabra06G0084600 Salix brachista HOM05D003589 ORTHO05D005170 4.4e-18 96.3 104 44.2
Sp5g10690 Schrenkiella parvula HOM05D003589 ORTHO05D005170 4.4e-18 96.3 182 33.0
A03p48340 Brassica napus HOM05D003589 ORTHO05D005170 7.5e-18 95.5 213 33.3
Oeu060212.1 Olea europaea HOM05D003589 ORTHO05D005170 7.5e-18 95.5 74 58.1
arahy.Tifrunner.gnm1.ann1.US8I5D Arachis hypogaea HOM05D003589 ORTHO05D005170 9.8e-18 95.1 210 31.9
HanXRQChr10g0287531 Helianthus annuus HOM05D003589 ORTHO05D005170 9.8e-18 95.1 79 54.4
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 1.3e-17 94.7 219 32.9
AT3G51580 Arabidopsis thaliana HOM05D003589 ORTHO05D005170 1.3e-17 94.7 227 33.0
arahy.Tifrunner.gnm1.ann1.IRJT2S Arachis hypogaea HOM05D003589 ORTHO05D005170 1.3e-17 94.7 158 35.4
Carub.0005s1794 Capsella rubella HOM05D003589 ORTHO05D005170 2.2e-17 94.0 230 33.5
MD12G1188500 Malus domestica HOM05D003589 ORTHO05D005170 2.2e-17 94.0 177 35.0
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 3.7e-17 93.2 236 29.2
CARHR161170 Cardamine hirsuta HOM05D003589 ORTHO05D005170 6.3e-17 92.4 212 32.1
Eucgr.A00727 Eucalyptus grandis HOM05D003589 ORTHO05D005170 6.3e-17 92.4 237 33.8
Sed0028030 Sechium edule HOM05D003589 ORTHO05D005170 1.1e-16 91.7 94 43.6
Gohir.D04G012700 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.4e-16 91.3 206 31.6
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 1.8e-16 90.9 101 44.6
ECA238G2532 Erigeron canadensis HOM05D003589 ORTHO05D005170 1.8e-16 90.9 183 33.3
C07p46370 Brassica napus HOM05D003589 ORTHO05D005170 2.4e-16 90.5 212 33.0
Oeu044185.1 Olea europaea HOM05D003589 ORTHO05D005170 2.4e-16 90.5 90 48.9
SalBow5G5138 Salvia bowleyana HOM05D003589 ORTHO05D005170 2.4e-16 90.5 227 30.8
Gorai.012G015000 Gossypium raimondii HOM05D003589 ORTHO05D005170 4.1e-16 89.7 206 32.0
Lsat_1_v5_gn_9_38921 Lactuca sativa HOM05D003589 ORTHO05D005170 4.1e-16 89.7 79 48.1
ECA247G3378 Erigeron canadensis HOM05D000259 ORTHO05D000155 5.4e-16 89.4 74 52.7
COL.COLO4_06483 Corchorus olitorius HOM05D003589 ORTHO05D005170 2.0e-15 87.4 152 34.9
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 2.0e-15 87.4 162 35.8
Manes.08G171100 Manihot esculenta HOM05D003589 ORTHO05D005170 2.7e-15 87.0 282 29.1
BolC7t45155H Brassica oleracea HOM05D003589 ORTHO05D005170 5.9e-15 85.9 224 32.1
BraA03t13942Z Brassica rapa HOM05D003589 ORTHO05D005170 7.7e-15 85.5 220 31.4
Thhalv10010441m.g Eutrema salsugineum HOM05D003589 ORTHO05D005170 1.3e-14 84.7 256 27.3
Gohir.A05G402800 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.7e-14 84.3 212 32.1
BcaC06g33027 Brassica carinata HOM05D003589 ORTHO05D005170 3.8e-14 83.2 234 28.6
Zm00001eb290650 Zea mays HOM05D003589 ORTHO05D005170 1.1e-13 81.6 185 28.6
Os05g0478200 Oryza sativa ssp. japonica HOM05D003589 ORTHO05D005170 1.9e-13 80.9 168 31.0
Zm00001eb352040 Zea mays HOM05D003589 ORTHO05D005170 3.3e-13 80.1 184 27.7
unitig_578.g15914 Utricularia gibba HOM05D003589 ORTHO05D005170 2.8e-12 77.0 315 26.7
CDE04G3060 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 8.0e-12 75.5 104 38.5
CDE04G2629 Ceratophyllum demersum HOM05D003589 ORTHO05D005170 1.8e-11 74.3 264 29.2
Nn2g10296 Nelumbo nucifera HOM05D003589 ORTHO05D005170 1.7e-09 67.8 170 34.1
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 2.7e-07 60.5 201 27.4
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 3.9e-06 56.6 200 26.5
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 3.9e-06 56.6 191 23.6


User provided reference genes

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