Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 9.0e-290 999.6 518 100.0
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 8.0e-206 720.7 477 76.5
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 2.9e-203 712.2 477 74.0
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 5.4e-202 708.0 480 77.3
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 1.2e-198 696.8 477 72.7
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 6.4e-195 684.5 418 79.4
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 9.2e-194 680.6 477 74.6
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 6.0e-193 677.9 417 77.7
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 6.6e-192 674.5 480 69.6
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 1.1e-191 673.7 471 71.3
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 2.8e-190 669.1 417 77.0
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 4.0e-189 665.2 504 67.7
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 2.0e-188 662.9 418 75.8
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 1.3e-187 660.2 411 78.1
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 2.9e-187 659.1 420 76.0
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 4.9e-187 658.3 479 68.7
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 6.4e-187 657.9 422 77.0
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 1.4e-186 656.8 418 75.4
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 1.2e-185 653.7 411 77.1
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 2.1e-185 652.9 411 76.9
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 2.1e-185 652.9 498 68.1
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.7e-185 652.5 479 68.3
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 3.9e-184 648.7 411 75.2
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 6.6e-184 647.9 416 75.2
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 8.6e-184 647.5 458 70.1
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 1.5e-183 646.7 510 65.5
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 1.5e-183 646.7 412 75.7
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 7.3e-183 644.4 416 74.0
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 1.6e-182 643.3 412 75.5
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 6.2e-182 641.3 412 73.8
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 1.4e-181 640.2 414 73.9
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 3.1e-181 639.0 418 73.9
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 1.2e-180 637.1 416 73.3
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 2.6e-180 636.0 418 74.4
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 2.6e-180 636.0 412 74.5
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 5.8e-180 634.8 412 73.5
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.3e-179 633.6 413 74.3
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 2.2e-179 632.9 418 75.8
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 4.9e-179 631.7 482 67.4
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 4.9e-179 631.7 455 68.1
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 2.4e-178 629.4 412 72.8
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.2e-178 629.0 403 75.2
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 1.6e-177 626.7 488 66.0
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 7.8e-177 624.4 416 73.8
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 2.3e-176 622.9 417 73.4
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 1.5e-175 620.2 412 72.6
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 2.8e-174 615.9 430 69.8
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 2.4e-173 612.8 411 70.3
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 1.5e-172 610.1 411 71.0
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 9.3e-170 600.9 420 68.8
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 9.3e-170 600.9 418 70.8
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 9.3e-170 600.9 413 72.4
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 2.7e-169 599.4 394 73.6
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 6.0e-169 598.2 463 66.1
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.0e-168 597.4 478 68.0
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 1.3e-168 597.0 436 68.1
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 1.3e-168 597.0 411 69.1
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 2.5e-167 592.8 477 63.5
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 3.3e-167 592.4 428 69.4
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 1.3e-166 590.5 411 68.9
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 1.3e-166 590.5 351 82.1
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 2.1e-166 589.7 411 70.3
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 2.1e-166 589.7 418 68.9
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 1.8e-165 586.6 411 68.6
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 2.4e-165 586.3 419 69.2
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 4.0e-165 585.5 449 66.4
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 3.8e-163 578.9 475 62.7
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 4.9e-163 578.6 411 68.1
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 1.2e-161 573.9 411 66.4
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.6e-161 573.5 351 80.3
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 2.1e-161 573.2 412 68.0
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 2.1e-161 573.2 416 68.0
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 6.0e-161 571.6 430 65.8
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 1.8e-160 570.1 416 68.0
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 1.9e-159 566.6 411 67.2
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 1.9e-159 566.6 450 61.8
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 9.6e-159 564.3 476 63.2
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 4.8e-158 562.0 418 66.7
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 1.3e-155 553.9 362 73.8
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 1.7e-155 553.5 394 69.0
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 2.2e-155 553.1 543 55.1
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 2.9e-155 552.7 417 65.7
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 8.4e-155 551.2 450 63.6
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 5.5e-154 548.5 344 76.7
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.1e-153 546.6 418 66.5
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 1.4e-149 533.9 401 66.3
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 7.4e-143 511.5 428 62.9
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 9.1e-141 504.6 370 66.5
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 1.2e-140 504.2 370 66.2
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 2.6e-135 486.5 374 67.4
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 7.4e-135 485.0 411 55.2
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 4.8e-134 482.3 411 56.7
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 1.1e-133 481.1 413 56.4
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 3.8e-131 472.6 324 72.2
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 1.8e-128 463.8 418 59.6
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 3.7e-126 456.1 411 57.7
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 1.2e-119 434.5 311 70.1
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 4.0e-112 409.5 456 46.9
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 2.0e-111 407.1 411 51.8
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 1.2e-105 387.9 306 65.0
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 1.8e-96 357.5 266 71.8
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 2.6e-95 353.6 283 62.5
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 4.3e-90 336.3 191 82.7
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 4.7e-81 306.2 184 79.9
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 8.9e-80 302.0 299 51.2
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 4.9e-78 296.2 229 67.2
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 6.4e-70 269.2 299 54.8
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 2.0e-63 247.7 211 66.4
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 2.3e-51 207.6 157 66.2
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 1.7e-46 191.4 257 44.4
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 2.1e-41 174.5 145 58.6
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 1.2e-39 168.7 121 65.3
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 4.5e-39 166.8 97 78.4
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 1.7e-38 164.9 96 77.1
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 1.9e-34 151.4 112 58.9
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 4.1e-32 143.7 276 38.4
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 6.9e-32 142.9 134 56.0
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 1.0e-30 139.0 274 35.4
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 2.2e-30 137.9 112 61.6
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 2.2e-30 137.9 82 69.5
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 4.3e-26 123.6 223 37.2
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 2.2e-25 121.3 103 60.2
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 2.4e-24 117.9 440 27.0
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 6.5e-22 109.8 96 58.3
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 2.3e-19 101.3 77 61.0
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 1.1e-16 92.4 109 48.6
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.8e-16 91.7 52 80.8
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 9.1e-16 89.4 283 27.6
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 4.5e-15 87.0 53 73.6
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 5.0e-14 83.6 47 80.9
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 2.5e-13 81.3 61 57.4
PRCOL_00006911 Prasinoderma coloniale HOM05D002474 ORTHO05D006727 7.2e-13 79.7 451 22.6
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 4.7e-12 77.0 57 57.9
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 1.8e-08 65.1 49 63.3
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 5.3e-08 63.5 34 82.4
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 2.0e-07 61.6 34 79.4


User provided reference genes

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