Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032574001 Vitis vinifera HOM05D007214 ORTHO05D008907 5.5e-38 161.0 116 100.0
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.0e-19 99.4 102 56.9
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 3.4e-19 98.6 103 55.3
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 2.2e-18 95.9 108 50.0
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 3.1e-17 92.0 102 52.9
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 4.5e-16 88.2 102 52.0
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 4.5e-16 88.2 107 48.6
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 5.9e-16 87.8 102 50.0
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 2.2e-15 85.9 102 50.0
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 5.0e-15 84.7 113 46.9
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 6.5e-15 84.3 102 50.0
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 6.5e-15 84.3 102 50.0
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 8.5e-15 84.0 102 50.0
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 3.2e-14 82.0 100 47.0
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 5.5e-14 81.3 112 45.5
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 9.4e-14 80.5 101 45.5
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 2.1e-13 79.3 100 47.0
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 2.1e-13 79.3 100 47.0
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 6.1e-13 77.8 108 42.6
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 1.0e-12 77.0 102 43.1
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 2.3e-12 75.9 100 45.0
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 8.8e-12 73.9 81 50.6
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 5.7e-11 71.2 112 45.5
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 9.8e-11 70.5 100 43.0
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 9.8e-11 70.5 102 58.8
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 1.7e-10 69.7 103 42.7
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.7e-10 69.7 46 76.1
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 1.7e-10 69.7 46 76.1
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 2.8e-10 68.9 46 73.9
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 2.8e-10 68.9 99 43.4
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 3.7e-10 68.6 92 44.6
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 3.7e-10 68.6 92 44.6
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 4.8e-10 68.2 102 44.1
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 4.8e-10 68.2 102 54.9
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 1.1e-09 67.0 104 41.3
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 1.1e-09 67.0 46 73.9
Oeu060589.1 Olea europaea HOM05D007214 ORTHO05D008907 1.1e-09 67.0 83 72.3
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.1e-09 67.0 46 71.7
Aa31LG2G4670 Aethionema arabicum HOM05D007214 ORTHO05D008907 1.4e-09 66.6 103 59.2
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 2.4e-09 65.9 46 69.6
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 3.1e-09 65.5 46 69.6
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 3.1e-09 65.5 102 42.2
Sabra07G0063000 Salix brachista HOM05D007214 ORTHO05D008907 4.1e-09 65.1 46 71.7
PGSC0003DMG400001300 Solanum tuberosum HOM05D007214 ORTHO05D008907 7.0e-09 64.3 81 64.2
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 9.1e-09 63.9 85 45.9
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 2.0e-08 62.8 85 45.9
MSTRG.23970 Avicennia marina HOM05D007214 ORTHO05D008907 3.5e-08 62.0 46 65.2
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 3.5e-08 62.0 102 45.1
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 7.7e-08 60.8 44 65.9
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 1.0e-07 60.5 82 43.9
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.7e-07 59.7 46 63.0
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 1.7e-07 59.7 92 39.1
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 2.3e-07 59.3 38 78.9
TAR629G0039 Trochodendron aralioides HOM05D000068 ORTHO05D008907 3.8e-07 58.5 81 42.0
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 5.0e-07 58.2 46 58.7
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 6.6e-07 57.8 41 70.7
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 6.6e-07 57.8 40 70.0
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 6.6e-07 57.8 38 76.3
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 1.1e-06 57.0 101 34.7
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 1.5e-06 56.6 46 63.0
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 1.5e-06 56.6 41 68.3
CDE02G1584 Ceratophyllum demersum HOM05D007214 ORTHO05D008907 3.3e-06 55.5 98 37.8
unitig_746.g26578 Utricularia gibba HOM05D007214 ORTHO05D008907 3.3e-06 55.5 46 63.0
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 4.2e-06 55.1 38 73.7
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 4.2e-06 55.1 38 76.3
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 4.2e-06 55.1 42 66.7
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 4.2e-06 55.1 102 60.8
HPP92_010494 Vanilla planifolia HOM05D007214 ORTHO05D008907 5.5e-06 54.7 102 35.3
MELO3C030968.2 Cucumis melo HOM05D007214 ORTHO05D008907 7.2e-06 54.3 92 31.5
Thecc.04G070100 Theobroma cacao HOM05D007214 ORTHO05D008907 7.2e-06 54.3 40 70.0
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 9.5e-06 53.9 38 73.7
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 9.5e-06 53.9 38 73.7


User provided reference genes

Program Settings