Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032495001 Vitis vinifera HOM05D002200 ORTHO05D002294 1.7e-27 125.2 59 100.0
GSVIVG01017734001 Vitis vinifera HOM05D002200 ORTHO05D002294 5.9e-20 100.1 49 93.9
GSVIVG01037347001 Vitis vinifera HOM05D002200 ORTHO05D002294 5.9e-20 100.1 49 93.9
GSVIVG01029947001 Vitis vinifera HOM05D002200 ORTHO05D002294 7.7e-20 99.8 48 95.8
GSVIVG01037535001 Vitis vinifera HOM05D002200 ORTHO05D002294 1.3e-19 99.0 49 91.8
GSVIVG01020013001 Vitis vinifera HOM05D002200 ORTHO05D002294 1.1e-18 95.9 49 87.8
GSVIVG01011950001 Vitis vinifera HOM05D002200 ORTHO05D002294 2.5e-18 94.7 49 87.8
GSVIVG01007569001 Vitis vinifera HOM05D002200 ORTHO05D002294 1.6e-17 92.0 49 87.8
CiPaw.02G082700 Carya illinoinensis HOM05D002200 ORTHO05D002294 1.3e-14 82.4 49 73.5
Sc19g0005340 Simmondsia chinensis HOM05D002200 ORTHO05D002294 2.2e-14 81.6 47 72.3
Atru.chr4.2847 Acer truncatum HOM05D002200 ORTHO05D002294 4.8e-14 80.5 49 69.4
Manes.03G195700 Manihot esculenta HOM05D002200 ORTHO05D002294 6.3e-14 80.1 49 69.4
Haze_01196 Corylus avellana HOM05D002200 ORTHO05D002294 1.1e-13 79.3 49 69.4
MBI19_g12145_MAGBIO Magnolia biondii HOM05D002200 ORTHO05D002294 1.4e-13 79.0 49 67.3
COL.COLO4_13865 Corchorus olitorius HOM05D002200 ORTHO05D002294 1.8e-13 78.6 47 72.3
Cc03_g01860 Coffea canephora HOM05D002200 ORTHO05D002294 2.4e-13 78.2 47 72.3
TAR362G0235 Trochodendron aralioides HOM05D002200 ORTHO05D002294 2.4e-13 78.2 49 65.3
Cfa015390 Carpinus fangiana HOM05D002200 ORTHO05D002294 3.1e-13 77.8 49 67.3
CSS0038505 Camellia sinensis var. sinensis HOM05D002200 ORTHO05D002294 4.1e-13 77.4 49 67.3
AUR62041509 Chenopodium quinoa HOM05D002200 ORTHO05D002294 4.1e-13 77.4 49 67.3
Potri.008G221900 Populus trichocarpa HOM05D002200 ORTHO05D002294 4.1e-13 77.4 47 72.3
QL06p008998 Quercus lobata HOM05D002200 ORTHO05D002294 4.1e-13 77.4 49 67.3
Cpa.g.sc16.175 Carica papaya HOM05D002200 ORTHO05D002294 5.3e-13 77.0 47 72.3
Sabra08G0152800 Salix brachista HOM05D002200 ORTHO05D002294 5.3e-13 77.0 47 74.5
Dinv29745 Davidia involucrata HOM05D002200 ORTHO05D002294 9.1e-13 76.3 49 65.3
Duzib151G0840 Durio zibethinus HOM05D002200 ORTHO05D002294 9.1e-13 76.3 47 70.2
SalBow2G2737 Salvia bowleyana HOM05D002200 ORTHO05D002294 9.1e-13 76.3 47 72.3
Ca_01935_v3 Cicer arietinum L. HOM05D002200 ORTHO05D002294 1.2e-12 75.9 49 69.4
Psat1g153960 Pisum sativum HOM05D002200 ORTHO05D002294 1.5e-12 75.5 49 67.3
Potri.008G221700 Populus trichocarpa HOM05D002200 ORTHO05D002294 1.5e-12 75.5 47 70.2
Migut.G00156 Erythranthe guttata HOM05D002200 ORTHO05D002294 2.0e-12 75.1 47 70.2
Lj6A676T60 Lonicera japonica HOM05D002200 ORTHO05D002294 2.0e-12 75.1 48 66.7
Ciclev10005528m.g Citrus clementina HOM05D002200 ORTHO05D002294 2.6e-12 74.7 49 67.3
Gohir.A02G049500 Gossypium hirsutum HOM05D002200 ORTHO05D002294 2.6e-12 74.7 47 66.0
Gohir.D02G054600 Gossypium hirsutum HOM05D002200 ORTHO05D002294 2.6e-12 74.7 47 66.0
Gorai.005G060500 Gossypium raimondii HOM05D002200 ORTHO05D002294 2.6e-12 74.7 47 66.0
Gorai.006G262400 Gossypium raimondii HOM05D002200 ORTHO05D002294 2.6e-12 74.7 47 66.0
RcHm_v2.0_Chr4g0422361 Rosa chinensis HOM05D002200 ORTHO05D002294 2.6e-12 74.7 47 68.1
MD16G1168400 Malus domestica HOM05D002200 ORTHO05D002294 3.4e-12 74.3 47 68.1
Potri.010G014200 Populus trichocarpa HOM05D002200 ORTHO05D002294 3.4e-12 74.3 47 68.1
AUR62044150 Chenopodium quinoa HOM05D002200 ORTHO05D002294 4.5e-12 73.9 49 65.3
Gohir.D09G239600 Gossypium hirsutum HOM05D002200 ORTHO05D002294 4.5e-12 73.9 47 66.0
Nn4g25824 Nelumbo nucifera HOM05D002200 ORTHO05D002294 4.5e-12 73.9 48 66.7
PSO170G5155 Papaver somniferum HOM05D002200 ORTHO05D002294 7.7e-12 73.2 47 63.8
Prupe.1G135600 Prunus persica HOM05D002200 ORTHO05D002294 7.7e-12 73.2 47 68.1
Thecc.04G285200 Theobroma cacao HOM05D002200 ORTHO05D002294 7.7e-12 73.2 47 66.0
ECA240G2040 Erigeron canadensis HOM05D002200 ORTHO05D002294 1.0e-11 72.8 47 63.8
Gohir.A09G238700 Gossypium hirsutum HOM05D002200 ORTHO05D002294 1.0e-11 72.8 47 63.8
MD13G1168000 Malus domestica HOM05D002200 ORTHO05D002294 1.0e-11 72.8 47 66.0
TPR.G23007 Trifolium pratense HOM05D002200 ORTHO05D002294 1.0e-11 72.8 49 65.3
Ah.13g074640 Amaranthus hybridus HOM05D002200 ORTHO05D002294 1.3e-11 72.4 49 63.3
Glyma.15G148300 Glycine max HOM05D002200 ORTHO05D002294 1.3e-11 72.4 49 63.3
Sabra08G0152700 Salix brachista HOM05D002200 ORTHO05D002294 1.3e-11 72.4 47 66.0
Medtr2g436750 Medicago truncatula HOM05D002200 ORTHO05D002294 1.7e-11 72.0 49 65.3
CAN.G185.36 Capsicum annuum HOM05D002200 ORTHO05D002294 2.2e-11 71.6 47 63.8
Actinidia14300 Actinidia chinensis HOM05D002200 ORTHO05D002294 2.9e-11 71.2 49 59.2
Lalb_Chr18g0051681 Lupinus albus HOM05D002200 ORTHO05D002294 2.9e-11 71.2 49 65.3
Phvul.009G248300 Phaseolus vulgaris HOM05D002200 ORTHO05D002294 2.9e-11 71.2 49 63.3
EL10Ac3g06603 Beta vulgaris HOM05D002200 ORTHO05D002294 3.8e-11 70.9 49 61.2
CANSAT78G1150 Cannabis sativa HOM05D002200 ORTHO05D002294 3.8e-11 70.9 47 63.8
FAN17G2603 Fragaria x ananassa HOM05D002200 ORTHO05D002294 3.8e-11 70.9 47 63.8
Oeu029704.1 Olea europaea HOM05D002200 ORTHO05D002294 3.8e-11 70.9 48 60.4
Rhsim02G0008800 Rhododendron simsii HOM05D002200 ORTHO05D002294 3.8e-11 70.9 49 57.1
SGA_v2.0_scaffold147G36296 Striga asiatica HOM05D002200 ORTHO05D002294 3.8e-11 70.9 47 66.0
DCAR_030528 Daucus carota HOM05D002200 ORTHO05D002294 5.0e-11 70.5 49 63.3
Dinv44378 Davidia involucrata HOM05D002200 ORTHO05D002294 5.0e-11 70.5 47 66.0
Eucgr.H03917 Eucalyptus grandis HOM05D002200 ORTHO05D002294 5.0e-11 70.5 49 65.3
Lsat_1_v5_gn_5_56820 Lactuca sativa HOM05D002200 ORTHO05D002294 6.5e-11 70.1 49 57.1
PSO210G2981 Papaver somniferum HOM05D002200 ORTHO05D002294 6.5e-11 70.1 47 59.6
vmacro15233 Vaccinium macrocarpon HOM05D002200 ORTHO05D002294 6.5e-11 70.1 49 59.2
Lj6g0007957 Lotus japonicus HOM05D002200 ORTHO05D002294 8.5e-11 69.7 47 63.8
Sopen01g030770 Solanum pennellii HOM05D002200 ORTHO05D002294 8.5e-11 69.7 47 61.7
CARHR290360 Cardamine hirsuta HOM05D002200 ORTHO05D002294 1.1e-10 69.3 48 60.4
PGSC0003DMG400006294 Solanum tuberosum HOM05D002200 ORTHO05D002294 1.1e-10 69.3 47 61.7
FvH4_4g18210 Fragaria vesca HOM05D002200 ORTHO05D002294 1.4e-10 68.9 47 63.8
FAN12G1003 Fragaria x ananassa HOM05D002200 ORTHO05D002294 1.4e-10 68.9 47 63.8
FAN12G2556 Fragaria x ananassa HOM05D002200 ORTHO05D002294 1.4e-10 68.9 47 63.8
TPR.G13831 Trifolium pratense HOM05D002200 ORTHO05D002294 1.4e-10 68.9 49 63.3
TWI09G1195 Tripterygium wilfordii HOM05D002200 ORTHO05D002294 1.4e-10 68.9 47 63.8
BcaB04g18334 Brassica carinata HOM05D002200 ORTHO05D002294 1.9e-10 68.6 48 60.4
Glyma.09G044600 Glycine max HOM05D002200 ORTHO05D002294 1.9e-10 68.6 49 61.2
VMungo1309G2676 Vigna mungo HOM05D002200 ORTHO05D002294 1.9e-10 68.6 47 63.8
Solyc01g080750.3 Solanum lycopersicum HOM05D002200 ORTHO05D002294 2.5e-10 68.2 47 61.7
arahy.Tifrunner.gnm1.ann1.44U0MG Arachis hypogaea HOM05D002200 ORTHO05D002294 4.2e-10 67.4 47 63.8
HanXRQChr13g0411211 Helianthus annuus HOM05D002200 ORTHO05D002294 4.2e-10 67.4 47 57.4
BcaC07g37934 Brassica carinata HOM05D002200 ORTHO05D002294 5.5e-10 67.0 48 58.3
unitig_32.g11873 Utricularia gibba HOM05D002200 ORTHO05D002294 5.5e-10 67.0 47 59.6
AL7G39460 Arabidopsis lyrata HOM05D002200 ORTHO05D002294 7.2e-10 66.6 47 59.6
arahy.Tifrunner.gnm1.ann1.PTDZ4U Arachis hypogaea HOM05D002200 ORTHO05D002294 7.2e-10 66.6 47 61.7
BolC8t48319H Brassica oleracea HOM05D002200 ORTHO05D002294 7.2e-10 66.6 48 58.3
BraA08t33191Z Brassica rapa HOM05D002200 ORTHO05D002294 7.2e-10 66.6 48 58.3
Nitab4.5_0000191g0190 Nicotiana tabacum HOM05D002200 ORTHO05D002294 9.4e-10 66.2 46 60.9
A08p12000 Brassica napus HOM05D002200 ORTHO05D002294 1.6e-09 65.5 48 58.3
Carub.0007s2582 Capsella rubella HOM05D002200 ORTHO05D002294 1.6e-09 65.5 47 57.4
PGR004G0930 Punica granatum HOM05D002200 ORTHO05D002294 2.1e-09 65.1 49 57.1
ATR0796G173 Amborella trichopoda HOM05D002200 ORTHO05D002294 2.7e-09 64.7 49 53.1
Peaxi162Scf01123g00223 Petunia axillaris HOM05D002200 ORTHO05D002294 2.7e-09 64.7 47 57.4
AT4G15830 Arabidopsis thaliana HOM05D002200 ORTHO05D002294 4.7e-09 63.9 47 55.3
Nitab4.5_0000059g0450 Nicotiana tabacum HOM05D002200 ORTHO05D002294 4.7e-09 63.9 46 58.7
Aqoxy2G02975 Aquilegia oxysepala HOM05D002200 ORTHO05D002294 7.9e-09 63.2 49 55.1
Zm00001eb363590 Zea mays HOM05D002200 ORTHO05D002294 1.0e-08 62.8 46 56.5
THA.LOC104821778 Tarenaya hassleriana HOM05D002200 ORTHO05D002294 2.3e-08 61.6 49 55.1
Os01g0931200 Oryza sativa ssp. japonica HOM05D002200 ORTHO05D002294 6.7e-08 60.1 49 49.0
ClCG00G005050 Citrullus lanatus HOM05D002200 ORTHO05D002294 8.8e-08 59.7 49 55.1
ClCG05G006120 Citrullus lanatus HOM05D002200 ORTHO05D002294 8.8e-08 59.7 49 55.1
MELO3C006666.2 Cucumis melo HOM05D002200 ORTHO05D002294 8.8e-08 59.7 49 53.1
CsaV3_3G014660 Cucumis sativus L. HOM05D002200 ORTHO05D002294 8.8e-08 59.7 49 53.1
Sp7g14230 Schrenkiella parvula HOM05D002200 ORTHO05D002294 2.0e-07 58.5 39 64.1
Sed0000385 Sechium edule HOM05D002200 ORTHO05D002294 2.0e-07 58.5 49 55.1
HPP92_011846 Vanilla planifolia HOM05D002200 ORTHO05D002294 2.0e-07 58.5 47 53.2
Sed0025797 Sechium edule HOM05D002200 ORTHO05D002294 2.6e-07 58.2 37 62.2
Thhalv10025856m.g Eutrema salsugineum HOM05D002200 ORTHO05D002294 4.4e-07 57.4 39 61.5
Solyc02g086940.3 Solanum lycopersicum HOM05D002200 ORTHO05D002294 7.4e-07 56.6 47 48.9
CDE08G0982 Ceratophyllum demersum HOM05D002200 ORTHO05D002294 2.2e-06 55.1 45 48.9
Sopen02g031710 Solanum pennellii HOM05D002200 ORTHO05D002294 2.2e-06 55.1 47 48.9
Cc07_g02350 Coffea canephora HOM05D002200 ORTHO05D002294 2.8e-06 54.7 47 51.1
Nitab4.5_0001952g0010 Nicotiana tabacum HOM05D002200 ORTHO05D002294 2.8e-06 54.7 49 44.9
Nitab4.5_0007907g0010 Nicotiana tabacum HOM05D002200 ORTHO05D002294 3.7e-06 54.3 47 46.8
CSS0031080 Camellia sinensis var. sinensis HOM05D002200 ORTHO05D002294 8.2e-06 53.1 47 44.7
PSO017G1373 Papaver somniferum HOM05D002200 ORTHO05D002294 8.2e-06 53.1 49 44.9
Pp3c11_24870 Physcomitrium patens HOM05D002200 ORTHO05D002294 8.2e-06 53.1 49 49.0
Rhsim10G0023700 Rhododendron simsii HOM05D002200 ORTHO05D002294 8.2e-06 53.1 47 46.8
PGSC0003DMG400000499 Solanum tuberosum HOM05D002200 ORTHO05D002294 8.2e-06 53.1 47 46.8


User provided reference genes

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