Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 2.6e-124 448.7 231 100.0
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 5.3e-101 371.3 231 79.7
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 7.0e-101 370.9 231 78.8
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 7.0e-101 370.9 231 79.7
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 9.1e-101 370.5 230 79.6
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 1.2e-100 370.2 232 80.2
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 1.2e-100 370.2 232 80.2
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 3.5e-100 368.6 227 80.2
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 3.5e-100 368.6 231 79.2
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 4.5e-100 368.2 232 79.7
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 5.9e-100 367.9 231 79.7
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 5.9e-100 367.9 231 79.2
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 2.2e-99 365.9 231 80.1
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 2.2e-99 365.9 231 80.1
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 2.2e-99 365.9 231 77.9
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 1.1e-98 363.6 231 76.6
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 2.5e-98 362.5 231 78.8
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 4.2e-98 361.7 231 80.5
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 5.5e-98 361.3 229 77.7
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 4.7e-97 358.2 231 75.8
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 1.4e-96 356.7 227 76.7
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 2.3e-96 355.9 231 75.8
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 2.3e-96 355.9 229 73.4
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 3.0e-96 355.5 230 77.4
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 3.0e-96 355.5 231 76.2
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.0e-96 355.5 231 72.7
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 4.0e-96 355.1 231 72.7
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.0e-96 355.1 231 72.3
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 2.0e-95 352.8 229 72.9
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 2.6e-95 352.4 229 76.9
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 5.7e-95 351.3 231 74.9
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 5.7e-95 351.3 227 76.7
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 5.7e-95 351.3 227 76.7
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 7.5e-95 350.9 231 74.9
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 9.7e-95 350.5 229 76.0
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 2.2e-94 349.4 231 74.0
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 3.7e-94 348.6 231 74.0
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 3.7e-94 348.6 231 74.0
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 4.8e-94 348.2 230 74.3
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 8.2e-94 347.4 227 76.2
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 8.2e-94 347.4 227 76.2
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 8.2e-94 347.4 226 74.3
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 1.1e-93 347.1 226 77.9
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 1.4e-93 346.7 231 74.0
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.4e-93 346.7 230 73.9
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 2.4e-93 345.9 231 75.3
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 3.1e-93 345.5 229 72.9
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.2e-92 343.6 239 69.0
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 2.0e-92 342.8 227 75.8
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 2.7e-92 342.4 229 73.4
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 2.7e-92 342.4 227 74.4
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 4.5e-92 341.7 227 75.3
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 4.5e-92 341.7 226 73.9
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 4.5e-92 341.7 229 71.6
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 5.9e-92 341.3 230 73.0
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 2.2e-91 339.3 228 73.7
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 2.2e-91 339.3 231 73.6
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 2.2e-91 339.3 230 74.8
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 2.9e-91 339.0 231 73.6
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.8e-91 338.6 265 63.4
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 3.8e-91 338.6 231 72.7
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 5.0e-91 338.2 231 72.7
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 6.5e-91 337.8 230 73.9
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 1.1e-90 337.0 231 72.3
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 1.5e-90 336.7 231 72.3
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 1.9e-90 336.3 231 71.9
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 7.2e-90 334.3 228 71.5
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 7.2e-90 334.3 228 71.5
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 7.2e-90 334.3 228 71.5
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 7.2e-90 334.3 228 71.5
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 7.2e-90 334.3 228 71.5
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 7.2e-90 334.3 231 71.9
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 1.6e-89 333.2 231 71.4
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 3.6e-89 332.0 228 71.1
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 2.3e-88 329.3 230 70.4
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 2.3e-88 329.3 229 70.7
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 3.0e-88 328.9 231 71.0
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 3.0e-88 328.9 231 70.6
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 5.2e-88 328.2 229 69.9
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 6.8e-88 327.8 229 70.3
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 8.8e-88 327.4 229 70.7
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 8.8e-88 327.4 233 71.2
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 1.2e-87 327.0 229 69.9
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 1.2e-87 327.0 229 69.9
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 2.0e-87 326.2 228 70.2
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 3.4e-87 325.5 229 69.4
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 2.2e-86 322.8 235 68.9
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 4.8e-86 321.6 228 69.3
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.1e-85 320.5 228 68.9
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 1.1e-85 320.5 228 69.7
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 4.1e-85 318.5 228 68.9
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 5.4e-85 318.2 265 61.9
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 7.0e-85 317.8 245 64.9
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 3.5e-84 315.5 230 67.4
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 9.5e-82 307.4 230 67.0
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 8.0e-81 304.3 230 68.3
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 2.2e-78 296.2 228 65.8
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 1.5e-74 283.5 223 66.4
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 6.4e-70 268.1 235 59.6
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 7.0e-69 264.6 176 72.2
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 4.3e-66 255.4 229 62.0
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.7e-62 243.4 231 55.0
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 3.3e-58 229.2 127 85.8
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 2.0e-55 219.9 203 61.1
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 5.8e-47 191.8 125 72.8
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 1.2e-44 184.1 124 70.2
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 1.6e-44 183.7 186 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 2.1e-44 183.3 177 50.8
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 6.6e-43 178.3 190 45.8
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 2.1e-41 173.3 144 60.4
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 5.3e-40 168.7 152 57.9
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 3.4e-39 166.0 186 44.6
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 1.2e-36 157.5 87 83.9
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.0e-35 154.5 187 43.3
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 6.6e-35 151.8 133 60.2
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 7.1e-29 131.7 91 72.5
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 3.5e-28 129.4 91 71.4
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 1.3e-27 127.5 87 73.6
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 1.1e-18 97.8 60 76.7
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 3.1e-16 89.7 86 52.3
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 8.4e-14 81.6 51 72.5
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 3.2e-13 79.7 192 27.1
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 5.3e-08 62.4 34 85.3


User provided reference genes

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