Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 0.0e+00 1369.4 691 100.0
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 1.4e-290 1002.7 713 71.2
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 1.4e-282 976.1 716 70.3
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 7.8e-281 970.3 704 71.3
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 5.6e-279 964.1 715 69.0
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 1.4e-277 959.5 713 68.9
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 1.9e-274 949.1 716 68.6
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 6.0e-273 944.1 711 69.1
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 2.3e-272 942.2 711 69.1
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.5e-271 939.5 711 68.2
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 2.5e-271 938.7 717 67.6
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 3.3e-271 938.3 686 71.1
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 3.6e-270 934.9 714 67.4
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 8.1e-270 933.7 710 69.0
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 1.4e-269 932.9 714 67.1
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 2.3e-269 932.2 713 67.9
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 3.1e-269 931.8 714 67.9
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 6.8e-269 930.6 710 68.7
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 3.4e-268 928.3 700 68.4
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 5.8e-268 927.5 700 68.0
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 3.7e-267 924.9 738 65.0
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 4.1e-266 921.4 719 66.2
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 1.2e-265 919.8 715 63.8
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 3.5e-265 918.3 715 63.4
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 3.0e-264 915.2 715 63.4
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 9.5e-263 910.2 707 65.9
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 8.1e-262 907.1 715 63.2
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.8e-261 906.0 744 64.2
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 1.8e-261 906.0 708 66.0
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 4.0e-261 904.8 712 65.9
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.5e-260 902.9 753 63.3
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 2.0e-260 902.5 709 65.4
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.3e-259 899.8 690 68.7
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 2.2e-259 899.0 733 65.1
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 4.9e-259 897.9 750 63.2
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 8.4e-259 897.1 706 65.6
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 2.4e-258 895.6 693 67.1
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.2e-258 895.2 744 63.4
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 5.4e-258 894.4 695 67.1
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 6.0e-257 891.0 698 64.5
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.3e-256 889.8 712 64.7
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 1.7e-256 889.4 704 64.8
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 7.3e-255 884.0 701 64.9
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 2.1e-254 882.5 713 64.1
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 2.8e-254 882.1 652 69.0
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 1.4e-253 879.8 704 63.9
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 3.4e-252 875.2 691 64.8
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 7.6e-252 874.0 712 64.9
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 2.2e-251 872.5 652 69.2
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 2.2e-251 872.5 696 65.5
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 1.0e-248 863.6 708 64.3
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 5.1e-248 861.3 713 62.3
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 3.3e-247 858.6 723 62.5
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 4.3e-247 858.2 704 63.8
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 2.8e-246 855.5 710 64.1
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 5.8e-244 847.8 698 62.3
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 5.8e-244 847.8 712 61.7
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 2.4e-242 842.4 712 61.2
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 3.2e-242 842.0 724 60.8
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 4.2e-242 841.6 683 64.0
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 1.2e-241 840.1 695 63.9
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 2.1e-241 839.3 704 61.8
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 3.5e-241 838.6 713 61.2
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 4.3e-239 831.6 704 63.2
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 9.6e-239 830.5 707 59.4
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.6e-238 829.7 715 60.6
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 3.7e-238 828.6 720 60.6
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 6.2e-238 827.8 593 72.2
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 8.1e-238 827.4 713 60.3
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 1.4e-237 826.6 678 62.4
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 2.0e-236 822.8 690 63.2
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 5.8e-236 821.2 665 66.0
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 6.7e-232 807.7 644 63.8
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 6.7e-232 807.7 605 68.6
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 1.1e-231 807.0 702 60.7
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 3.3e-231 805.4 699 60.4
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 5.6e-231 804.7 699 60.8
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 1.3e-230 803.5 703 61.0
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.4e-229 800.0 698 60.6
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 1.2e-228 797.0 699 60.7
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 1.2e-228 797.0 701 60.3
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 2.6e-228 795.8 699 60.4
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 1.3e-227 793.5 699 60.4
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 2.2e-227 792.7 699 60.5
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 1.9e-226 789.6 694 59.8
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 7.1e-226 787.7 701 60.1
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 9.3e-226 787.3 702 59.7
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 5.7e-223 778.1 707 59.1
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 9.7e-223 777.3 734 56.8
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 8.2e-222 774.2 701 58.9
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 1.8e-221 773.1 608 64.8
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 1.2e-220 770.4 697 58.7
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 1.5e-220 770.0 706 58.6
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 4.5e-220 768.5 668 60.9
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 5.5e-218 761.5 786 53.3
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 1.1e-210 737.3 697 56.4
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.8e-208 729.9 591 66.5
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.0e-208 729.2 637 62.3
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 3.2e-202 709.1 692 56.9
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 8.2e-198 694.5 601 61.1
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 7.0e-197 691.4 704 53.4
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 4.0e-192 675.6 716 50.8
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 7.7e-188 661.4 521 66.2
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 9.8e-183 644.4 612 56.0
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 7.0e-181 638.3 701 50.6
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.3e-171 607.4 423 74.7
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 8.0e-169 598.2 640 53.3
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 1.8e-165 587.0 517 63.2
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 3.4e-151 539.7 494 58.7
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 1.6e-145 520.8 706 47.6
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 3.4e-143 513.1 422 62.1
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 4.5e-119 433.0 771 36.2
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 7.6e-119 432.2 743 37.3
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 2.9e-110 403.7 704 35.8
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 1.7e-94 351.3 496 42.1
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.6e-92 344.7 331 55.6
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 7.9e-92 342.4 348 52.9
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 3.6e-84 317.0 280 62.5
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 7.0e-72 276.2 267 56.9
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 4.0e-67 260.4 248 56.5
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 2.1e-52 211.5 272 48.9
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 6.4e-49 199.9 244 45.9
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 6.2e-44 183.3 160 59.4
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 7.0e-40 169.9 466 29.2
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.7e-33 148.7 155 53.5
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 2.1e-31 141.7 656 25.8
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 4.0e-27 127.5 283 34.6
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 8.4e-25 119.8 93 68.8
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 1.1e-24 119.4 129 51.9
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 7.8e-15 86.7 64 70.3
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 7.8e-15 86.7 101 44.6
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 7.3e-13 80.1 65 64.6
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.8e-11 75.5 90 47.8
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 2.2e-09 68.6 63 65.1


User provided reference genes

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