Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 7.1e-59 230.3 111 100.0
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 4.3e-48 194.5 113 85.0
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 9.6e-48 193.4 115 81.7
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.2e-47 193.0 113 85.0
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 3.6e-47 191.4 114 79.8
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 1.4e-46 189.5 116 80.2
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 1.4e-46 189.5 111 81.1
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.8e-46 189.1 113 81.4
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 4.0e-46 188.0 97 91.8
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 5.2e-46 187.6 115 81.7
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 5.2e-46 187.6 113 81.4
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 6.9e-46 187.2 114 74.6
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 6.9e-46 187.2 116 82.8
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 9.0e-46 186.8 101 89.1
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.5e-45 186.0 114 73.7
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.5e-45 186.0 113 79.6
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 2.0e-45 185.7 113 77.9
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 3.4e-45 184.9 113 78.8
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 5.8e-45 184.1 113 77.9
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 7.6e-45 183.7 119 77.3
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 7.6e-45 183.7 100 86.0
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 9.9e-45 183.3 114 78.9
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 1.3e-44 183.0 113 77.0
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 1.7e-44 182.6 113 78.8
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 1.7e-44 182.6 112 79.5
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.7e-44 182.6 113 81.4
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 2.9e-44 181.8 115 80.9
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 2.9e-44 181.8 112 79.5
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.9e-44 181.8 113 77.9
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 4.9e-44 181.0 113 76.1
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 8.4e-44 180.3 122 75.4
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 8.4e-44 180.3 122 75.4
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 8.4e-44 180.3 114 78.9
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 1.1e-43 179.9 112 76.8
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 1.9e-43 179.1 113 78.8
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 1.9e-43 179.1 95 87.4
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.4e-43 178.7 114 75.4
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 2.4e-43 178.7 114 75.4
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 4.2e-43 177.9 113 81.4
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 5.4e-43 177.6 114 77.2
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 7.1e-43 177.2 114 73.7
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 9.3e-43 176.8 115 78.3
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 9.3e-43 176.8 107 76.6
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.6e-42 176.0 104 76.9
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 2.1e-42 175.6 116 79.3
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 2.1e-42 175.6 113 77.9
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.1e-42 175.6 113 77.9
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.1e-42 175.6 113 77.9
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.1e-42 175.6 113 77.9
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 2.1e-42 175.6 114 76.3
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 3.5e-42 174.9 113 77.0
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 4.6e-42 174.5 112 74.1
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 4.6e-42 174.5 113 76.1
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 6.0e-42 174.1 98 86.7
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 6.0e-42 174.1 116 79.3
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 6.0e-42 174.1 115 74.8
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.0e-41 173.3 113 76.1
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 1.3e-41 172.9 95 87.4
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 2.3e-41 172.2 101 79.2
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 3.0e-41 171.8 107 78.5
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 3.9e-41 171.4 111 74.8
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 5.1e-41 171.0 113 81.4
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 1.5e-40 169.5 107 76.6
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 1.5e-40 169.5 96 84.4
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 4.3e-40 167.9 120 73.3
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 5.6e-40 167.5 113 72.6
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 2.1e-39 165.6 129 68.2
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.1e-39 165.6 105 76.2
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 2.1e-39 165.6 115 71.3
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 2.1e-39 165.6 104 76.9
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 3.6e-39 164.9 118 70.3
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 4.8e-39 164.5 105 75.2
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 6.2e-39 164.1 113 70.8
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 6.2e-39 164.1 111 75.7
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 1.1e-38 163.3 112 72.3
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 2.4e-38 162.2 114 71.1
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 5.3e-38 161.0 113 70.8
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 5.3e-38 161.0 114 70.2
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 9.0e-38 160.2 103 74.8
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 9.0e-38 160.2 103 74.8
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 9.0e-38 160.2 103 74.8
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 9.0e-38 160.2 126 67.5
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 7.6e-37 157.1 115 67.0
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 9.9e-37 156.8 97 76.3
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 1.9e-35 152.5 83 86.7
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 4.2e-35 151.4 115 65.2
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 9.3e-35 150.2 96 71.9
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 1.4e-30 136.3 97 61.9
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.6e-29 132.1 93 65.6
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 6.4e-28 127.5 93 68.8
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.1e-27 126.7 123 61.0
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 7.1e-27 124.0 80 78.8
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 2.1e-26 122.5 93 55.9
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 7.9e-26 120.6 101 55.4
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 4.3e-24 114.8 82 72.0
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 8.2e-23 110.5 96 53.1
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 2.6e-21 105.5 60 83.3
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 4.3e-16 88.2 95 43.2
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 2.5e-11 72.4 100 35.0
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 4.6e-10 68.2 50 70.0
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 3.1e-06 55.5 48 54.2


User provided reference genes

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