Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 1.2e-74 283.1 145 100.0
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 3.2e-43 178.7 152 67.8
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.1e-40 170.2 152 64.5
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 1.5e-40 169.9 153 65.4
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 3.3e-40 168.7 144 63.9
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 9.6e-40 167.2 142 66.2
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.3e-39 166.8 142 66.2
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.6e-39 166.4 142 66.2
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 3.6e-39 165.2 149 61.7
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 4.8e-39 164.9 152 62.5
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 8.1e-39 164.1 118 74.6
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 8.1e-39 164.1 122 70.5
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 3.1e-38 162.2 149 62.4
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 3.1e-38 162.2 149 61.7
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 3.1e-38 162.2 148 60.8
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 4.0e-38 161.8 129 69.8
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 4.0e-38 161.8 150 61.3
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 5.3e-38 161.4 134 64.2
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 2.0e-37 159.5 146 63.0
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 2.6e-37 159.1 151 58.9
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 4.5e-37 158.3 150 60.7
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 4.5e-37 158.3 146 61.6
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.7e-36 156.4 151 60.9
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 2.2e-36 156.0 153 60.1
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 3.8e-36 155.2 155 57.4
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 1.1e-35 153.7 118 68.6
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.4e-35 152.5 143 64.3
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 7.1e-35 151.0 146 56.2
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 1.2e-34 150.2 150 58.7
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 6.0e-34 147.9 100 74.0
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 7.9e-34 147.5 145 58.6
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 2.3e-33 146.0 150 56.0
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 2.3e-33 146.0 118 63.6
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.3e-33 146.0 116 63.8
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 3.0e-33 145.6 122 67.2
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 3.0e-33 145.6 100 75.0
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 6.7e-33 144.4 117 66.7
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 1.5e-32 143.3 143 60.1
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 1.9e-32 142.9 146 58.9
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 5.6e-32 141.4 141 56.0
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 5.6e-32 141.4 101 72.3
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 7.4e-32 141.0 150 57.3
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 1.6e-31 139.8 152 55.3
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 1.6e-31 139.8 94 73.4
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 8.1e-31 137.5 154 53.9
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 8.1e-31 137.5 150 52.0
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 1.1e-30 137.1 126 60.3
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 1.1e-30 137.1 130 58.5
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 1.4e-30 136.7 119 62.2
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 1.8e-30 136.3 146 56.2
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 2.4e-30 136.0 130 58.5
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 2.4e-30 136.0 149 56.4
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 3.1e-30 135.6 126 59.5
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 3.1e-30 135.6 117 64.1
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 3.1e-30 135.6 141 57.4
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 3.1e-30 135.6 87 80.5
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 5.3e-30 134.8 126 59.5
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 5.3e-30 134.8 120 60.8
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 9.0e-30 134.0 155 56.8
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 1.2e-29 133.7 122 59.8
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 1.5e-29 133.3 122 59.0
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 2.0e-29 132.9 126 56.3
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 2.0e-29 132.9 101 68.3
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 2.6e-29 132.5 126 57.1
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 3.4e-29 132.1 99 69.7
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 4.5e-29 131.7 125 56.8
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 4.5e-29 131.7 160 51.2
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 4.5e-29 131.7 94 73.4
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 5.8e-29 131.3 104 66.3
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 5.8e-29 131.3 118 59.3
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 5.8e-29 131.3 150 51.3
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 7.6e-29 131.0 143 53.8
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 9.9e-29 130.6 114 61.4
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 9.9e-29 130.6 149 49.7
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 9.9e-29 130.6 144 55.6
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 1.7e-28 129.8 150 50.7
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 2.2e-28 129.4 118 58.5
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 2.2e-28 129.4 137 58.4
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 3.8e-28 128.6 100 66.0
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.1e-27 127.1 109 61.5
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 1.4e-27 126.7 118 57.6
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 3.2e-27 125.6 86 74.4
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 4.2e-27 125.2 103 68.0
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 5.5e-27 124.8 101 69.3
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 5.5e-27 124.8 118 63.6
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 7.9e-26 120.9 132 54.5
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 7.9e-26 120.9 126 55.6
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 1.8e-25 119.8 126 55.6
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 5.1e-25 118.2 86 70.9
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 8.7e-25 117.5 93 65.6
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 1.1e-24 117.1 86 68.6
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 5.6e-24 114.8 84 72.6
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 3.7e-23 112.1 110 55.5
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 8.2e-23 110.9 113 53.1
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 5.3e-22 108.2 101 53.5
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 1.2e-21 107.1 76 71.1
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.2e-21 107.1 72 76.4
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 5.8e-21 104.8 74 74.3
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 4.6e-18 95.1 69 72.5
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 1.0e-17 94.0 121 45.5
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 3.0e-17 92.4 71 70.4
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 3.9e-17 92.0 83 59.0
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 1.9e-16 89.7 102 53.9
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 5.7e-16 88.2 90 52.2
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 5.7e-16 88.2 80 56.2
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 4.1e-14 82.0 74 54.1
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 6.9e-14 81.3 49 77.6
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 7.7e-13 77.8 57 63.2
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 2.2e-12 76.3 104 50.0


User provided reference genes

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