Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032290001 Vitis vinifera HOM05D000015 ORTHO05D019400 4.6e-32 140.6 70 100.0
GSVIVG01013588001 Vitis vinifera HOM05D000015 ORTHO05D019400 1.4e-12 75.9 51 72.5
GSVIVG01026420001 Vitis vinifera HOM05D000015 ORTHO05D003512 2.6e-11 71.6 76 52.6
TAR376G0086 Trochodendron aralioides HOM05D000015 ORTHO05D003512 5.5e-09 63.9 76 44.7
Atru.chr3.8 Acer truncatum HOM05D000015 ORTHO05D003512 9.4e-09 63.2 76 43.4
Nn6g31588 Nelumbo nucifera HOM05D000015 ORTHO05D003512 9.4e-09 63.2 76 46.1
Atru.chr2.3216 Acer truncatum HOM05D000015 ORTHO05D019400 1.2e-08 62.8 74 44.6
Dinv19114 Davidia involucrata HOM05D000015 ORTHO05D003512 1.6e-08 62.4 73 46.6
Manes.01G158500 Manihot esculenta HOM05D000015 ORTHO05D003512 3.6e-08 61.2 76 43.4
MBI04_g11523_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D003512 1.4e-07 59.3 76 43.4
QL06p053495 Quercus lobata HOM05D000015 ORTHO05D003512 2.3e-07 58.5 76 40.8
GSVIVG01013752001 Vitis vinifera HOM05D000015 ORTHO05D019400 2.3e-07 58.5 41 68.3
PSO541G3262 Papaver somniferum HOM05D000015 ORTHO05D003512 3.0e-07 58.2 74 43.2
PSO675G4372 Papaver somniferum HOM05D000015 ORTHO05D003512 3.0e-07 58.2 74 43.2
FvH4_1g09800 Fragaria vesca HOM05D000015 ORTHO05D003512 4.0e-07 57.8 76 42.1
FAN19G2626 Fragaria x ananassa HOM05D000015 ORTHO05D003512 4.0e-07 57.8 76 42.1
Cfa007120 Carpinus fangiana HOM05D000015 ORTHO05D003512 5.2e-07 57.4 76 40.8
Haze_03649 Corylus avellana HOM05D000015 ORTHO05D003512 5.2e-07 57.4 76 40.8
Sabra16G0308400 Salix brachista HOM05D000015 ORTHO05D003512 5.2e-07 57.4 73 42.5
Ciclev10024941m.g Citrus clementina HOM05D000015 ORTHO05D003512 6.7e-07 57.0 76 39.5
Cc07_g12340 Coffea canephora HOM05D000015 ORTHO05D003512 6.7e-07 57.0 76 40.8
FAN23G0183 Fragaria x ananassa HOM05D000015 ORTHO05D003512 6.7e-07 57.0 76 40.8
FAN23G0680 Fragaria x ananassa HOM05D000015 ORTHO05D003512 6.7e-07 57.0 76 40.8
FAN26G2046 Fragaria x ananassa HOM05D000015 ORTHO05D003512 6.7e-07 57.0 76 40.8
FAN28G0786 Fragaria x ananassa HOM05D000015 ORTHO05D003512 6.7e-07 57.0 76 40.8
Potri.001G455800 Populus trichocarpa HOM05D000015 ORTHO05D003512 1.2e-06 56.2 76 39.5
Rhsim10G0190300 Rhododendron simsii HOM05D000015 ORTHO05D003512 1.2e-06 56.2 76 39.5
RhsimUnG0112800 Rhododendron simsii HOM05D000015 ORTHO05D003512 1.2e-06 56.2 76 39.5
Aqoxy6G03050 Aquilegia oxysepala HOM05D000015 ORTHO05D003512 2.0e-06 55.5 74 41.9
arahy.Tifrunner.gnm1.ann1.KJ02D9 Arachis hypogaea HOM05D000015 ORTHO05D003512 2.0e-06 55.5 76 40.8
arahy.Tifrunner.gnm1.ann1.RG5V6R Arachis hypogaea HOM05D000015 ORTHO05D003512 2.0e-06 55.5 76 40.8
Hma1.2p1_0085F.1_g044280 Hydrangea macrophylla HOM05D000015 ORTHO05D003512 2.0e-06 55.5 73 41.1
Hma1.2p1_0353F.1_g133120 Hydrangea macrophylla HOM05D000015 ORTHO05D003512 2.6e-06 55.1 73 41.1
DCAR_014126 Daucus carota HOM05D000015 ORTHO05D003512 3.3e-06 54.7 76 38.2
RcHm_v2.0_Chr2g0096651 Rosa chinensis HOM05D000015 ORTHO05D003512 3.3e-06 54.7 76 39.5
vmacro20409 Vaccinium macrocarpon HOM05D000015 ORTHO05D003512 4.4e-06 54.3 76 39.5
Atru.chr3.76 Acer truncatum HOM05D000115 ORTHO05D003511 5.7e-06 53.9 70 42.9
ATR0605G340 Amborella trichopoda HOM05D000015 ORTHO05D003512 5.7e-06 53.9 74 41.9
CiPaw.03G212100 Carya illinoinensis HOM05D000015 ORTHO05D003512 7.5e-06 53.5 76 39.5
Eucgr.J02574 Eucalyptus grandis HOM05D000015 ORTHO05D003512 7.5e-06 53.5 76 39.5
PSO017G5125 Papaver somniferum HOM05D000015 ORTHO05D003512 9.7e-06 53.1 76 36.8
PSO170G0864 Papaver somniferum HOM05D000015 ORTHO05D003512 9.7e-06 53.1 76 36.8


User provided reference genes

Program Settings