Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.4e-80 301.6 151 100.0
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 1.6e-53 213.0 148 73.0
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 2.7e-53 212.2 148 75.0
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 4.6e-53 211.5 148 71.6
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.3e-52 209.9 148 73.0
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 2.3e-52 209.1 148 73.6
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 4.3e-51 204.9 148 71.6
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 1.6e-50 203.0 148 68.9
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.6e-50 203.0 149 69.8
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 2.8e-50 202.2 148 71.6
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 2.8e-50 202.2 148 68.9
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 6.2e-50 201.1 148 69.6
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 6.2e-50 201.1 148 70.3
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 6.2e-50 201.1 149 69.8
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 8.1e-50 200.7 148 67.6
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 1.1e-49 200.3 148 69.6
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.4e-49 199.9 147 70.1
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 1.4e-49 199.9 148 68.2
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 2.4e-49 199.1 148 68.2
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.4e-49 199.1 148 68.2
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 2.4e-49 199.1 147 70.1
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 3.1e-49 198.7 149 66.4
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.1e-49 198.7 148 66.2
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 3.1e-49 198.7 149 67.1
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 3.1e-49 198.7 149 67.1
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 3.1e-49 198.7 149 67.1
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 4.0e-49 198.4 152 69.7
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 5.3e-49 198.0 149 67.8
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 6.9e-49 197.6 148 68.2
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.0e-49 197.2 148 65.5
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.0e-49 197.2 148 65.5
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 9.0e-49 197.2 149 66.4
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 9.0e-49 197.2 149 66.4
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 9.0e-49 197.2 148 68.2
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.5e-48 196.4 148 68.2
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.5e-48 196.4 150 67.3
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.0e-48 196.1 148 67.6
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 2.6e-48 195.7 148 68.9
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.6e-48 195.7 148 69.6
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 3.4e-48 195.3 147 67.3
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 3.4e-48 195.3 148 67.6
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 3.4e-48 195.3 146 65.8
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 3.4e-48 195.3 147 67.3
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 3.4e-48 195.3 148 67.6
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 4.5e-48 194.9 148 66.9
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 5.8e-48 194.5 148 66.2
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 5.8e-48 194.5 148 67.6
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 1.7e-47 193.0 170 61.2
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 1.7e-47 193.0 148 64.2
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.2e-47 192.6 148 68.2
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 2.2e-47 192.6 149 65.8
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 2.2e-47 192.6 147 68.7
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 3.8e-47 191.8 147 68.7
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 4.9e-47 191.4 148 68.2
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 4.9e-47 191.4 147 66.7
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 6.5e-47 191.0 176 59.1
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 6.5e-47 191.0 147 67.3
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 1.1e-46 190.3 147 66.7
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.4e-46 189.9 147 67.3
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.9e-46 189.5 147 66.0
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.9e-46 189.5 148 64.2
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 2.5e-46 189.1 148 66.9
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 2.5e-46 189.1 147 66.7
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 3.2e-46 188.7 148 66.9
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 3.2e-46 188.7 148 66.2
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 3.2e-46 188.7 148 66.2
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 3.2e-46 188.7 147 64.6
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 3.2e-46 188.7 147 67.3
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 4.2e-46 188.3 148 66.2
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.2e-46 188.3 147 66.0
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 7.1e-46 187.6 149 65.1
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 7.1e-46 187.6 147 66.7
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 7.1e-46 187.6 147 66.7
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 9.3e-46 187.2 147 66.0
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 9.3e-46 187.2 147 65.3
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 1.2e-45 186.8 147 66.0
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.6e-45 186.4 148 65.5
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 2.1e-45 186.0 147 63.9
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 2.7e-45 185.7 148 62.2
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 2.7e-45 185.7 148 62.8
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 3.5e-45 185.3 148 63.5
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 6.0e-45 184.5 147 64.6
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 6.0e-45 184.5 147 64.6
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 1.3e-44 183.3 168 59.5
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 2.3e-44 182.6 148 64.9
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 3.0e-44 182.2 153 64.1
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 3.9e-44 181.8 148 62.8
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 1.9e-43 179.5 147 61.9
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 3.3e-43 178.7 148 59.5
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 5.7e-43 177.9 149 61.1
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 7.4e-43 177.6 149 62.4
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 2.1e-42 176.0 180 57.2
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 4.8e-42 174.9 147 58.5
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 4.8e-42 174.9 175 53.7
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 4.8e-42 174.9 143 59.4
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 6.3e-42 174.5 149 60.4
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.1e-41 173.7 146 57.5
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 1.1e-41 173.7 147 60.5
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.4e-41 173.3 175 55.4
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 1.2e-40 170.2 150 60.0
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-39 166.8 169 54.4
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.0e-39 164.9 130 66.2
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.6e-37 158.3 130 64.6
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 6.1e-37 157.9 130 64.6
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.3e-36 156.8 80 92.5
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 5.7e-35 151.4 148 56.8
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 3.7e-34 148.7 161 50.9
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 5.3e-33 144.8 82 85.4
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 7.7e-32 141.0 229 39.3
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.5e-30 134.8 128 57.8
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 8.8e-28 127.5 117 49.6
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.4e-27 125.2 147 47.6
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.4e-27 125.2 147 48.3
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 4.8e-26 121.7 147 46.3
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 2.2e-23 112.8 145 41.4
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 2.0e-19 99.8 145 37.9
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 2.0e-19 99.8 132 37.9


User provided reference genes

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