Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.0e-47 192.2 103 100.0
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 8.3e-30 133.7 95 72.6
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.9e-29 132.5 95 70.5
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.9e-29 132.5 95 70.5
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 5.4e-29 131.0 95 70.5
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 7.1e-29 130.6 97 70.1
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 9.2e-29 130.2 95 70.5
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 9.2e-29 130.2 95 70.5
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 9.2e-29 130.2 96 68.8
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 9.2e-29 130.2 95 70.5
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 9.2e-29 130.2 95 69.5
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 2.1e-28 129.0 95 68.4
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 6.0e-28 127.5 95 67.4
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 7.8e-28 127.1 95 69.5
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 7.8e-28 127.1 95 65.3
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 7.8e-28 127.1 95 66.3
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 1.0e-27 126.7 95 67.4
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 1.0e-27 126.7 91 69.2
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.0e-27 126.7 95 67.4
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.0e-27 126.7 95 67.4
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.0e-27 126.7 95 67.4
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 1.3e-27 126.3 95 66.3
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.3e-27 126.3 95 67.4
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 2.3e-27 125.6 95 66.3
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 2.3e-27 125.6 95 66.3
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.3e-27 125.6 95 66.3
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 2.3e-27 125.6 91 69.2
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 3.0e-27 125.2 95 64.2
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 3.0e-27 125.2 95 66.3
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 3.0e-27 125.2 96 67.7
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 3.0e-27 125.2 91 69.2
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 3.9e-27 124.8 90 68.9
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 3.9e-27 124.8 91 68.1
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 3.9e-27 124.8 91 68.1
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 3.9e-27 124.8 95 67.4
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 5.1e-27 124.4 95 66.3
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 5.1e-27 124.4 91 69.2
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 5.1e-27 124.4 91 69.2
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 6.6e-27 124.0 95 66.3
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 8.6e-27 123.6 95 66.3
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 1.1e-26 123.2 95 65.3
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.1e-26 123.2 95 65.3
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 1.5e-26 122.9 95 65.3
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 1.5e-26 122.9 95 68.4
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 1.9e-26 122.5 95 66.3
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.9e-26 122.5 95 66.3
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 3.3e-26 121.7 91 65.9
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 3.3e-26 121.7 95 63.2
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 4.3e-26 121.3 99 66.7
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 5.6e-26 120.9 90 66.7
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 9.5e-26 120.2 91 64.8
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.2e-25 119.8 90 65.6
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.2e-25 119.8 91 65.9
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 1.2e-25 119.8 95 64.2
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.6e-25 119.4 95 62.1
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 2.1e-25 119.0 95 63.2
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 2.1e-25 119.0 95 62.1
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 2.8e-25 118.6 97 64.9
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.8e-25 118.6 99 63.6
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 3.6e-25 118.2 95 62.1
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 3.6e-25 118.2 90 65.6
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 4.7e-25 117.9 90 65.6
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 6.2e-25 117.5 90 64.4
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.1e-24 116.7 90 63.3
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.1e-24 116.7 95 61.1
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.1e-24 116.7 95 61.1
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.1e-24 116.7 95 61.1
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.1e-24 116.7 95 61.1
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 1.8e-24 115.9 91 63.7
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 1.8e-24 115.9 95 63.2
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 2.4e-24 115.5 90 64.4
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 2.4e-24 115.5 90 64.4
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 2.4e-24 115.5 90 64.4
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 2.4e-24 115.5 90 64.4
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 2.4e-24 115.5 90 64.4
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.4e-24 115.5 95 60.0
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.4e-24 115.5 95 61.1
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 2.4e-24 115.5 91 63.7
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 3.1e-24 115.2 90 64.4
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 3.1e-24 115.2 90 64.4
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 3.1e-24 115.2 90 64.4
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 4.0e-24 114.8 90 63.3
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 5.2e-24 114.4 90 64.4
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 5.2e-24 114.4 90 63.3
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 8.9e-24 113.6 90 67.8
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 2.0e-23 112.5 94 61.7
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 2.6e-23 112.1 99 60.6
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 1.7e-22 109.4 90 65.6
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.2e-22 109.0 95 61.1
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 3.8e-22 108.2 98 59.2
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.9e-22 107.8 95 63.2
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 8.4e-22 107.1 95 61.1
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 8.4e-22 107.1 95 60.0
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 8.4e-22 107.1 95 60.0
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 8.4e-22 107.1 95 60.0
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 1.4e-21 106.3 95 54.7
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 2.4e-21 105.5 99 57.6
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 2.4e-21 105.5 95 61.1
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.7e-20 102.1 95 57.9
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 6.0e-20 100.9 96 58.3
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 2.3e-19 99.0 95 60.0
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 5.6e-18 94.4 99 53.5
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 3.1e-16 88.6 68 66.2
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 1.2e-15 86.7 99 46.5
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 2.2e-14 82.4 95 50.5
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 2.4e-13 79.0 58 62.1
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 3.2e-13 78.6 97 48.5
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 5.4e-13 77.8 99 46.5
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 9.0e-08 60.5 98 40.8
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.5e-07 59.7 46 58.7
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.5e-07 59.7 46 58.7
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.0e-07 59.3 43 60.5
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.0e-07 59.3 43 60.5


User provided reference genes

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