Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032173001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.5e-92 342.8 166 100.0
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 8.3e-88 327.0 163 96.9
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 8.1e-59 230.7 163 70.6
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 7.6e-57 224.2 162 67.9
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 1.4e-55 219.9 163 66.9
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 2.4e-55 219.2 163 64.4
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 5.4e-55 218.0 163 66.9
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 1.0e-53 213.8 150 66.0
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 8.7e-53 210.7 163 64.4
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 5.6e-52 208.0 163 64.4
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.3e-51 206.8 163 61.3
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 1.6e-51 206.5 161 63.4
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 1.6e-51 206.5 161 63.4
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 3.6e-51 205.3 165 64.8
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 3.6e-51 205.3 163 63.2
Lj9A311T56 Lonicera japonica HOM05D002759 ORTHO05D003290 4.0e-50 201.8 163 65.6
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 6.9e-50 201.1 167 58.1
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 5.8e-49 198.0 160 60.6
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.7e-48 196.4 162 59.9
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 2.9e-48 195.7 162 61.1
MD15G1419000 Malus domestica HOM05D002759 ORTHO05D003290 2.9e-48 195.7 162 61.1
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 3.8e-48 195.3 163 58.9
Cpa.g.sc148.32 Carica papaya HOM05D002759 ORTHO05D003290 4.9e-48 194.9 164 61.6
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 6.4e-48 194.5 151 58.9
Gohir.D01G167432 Gossypium hirsutum HOM05D002759 ORTHO05D003290 3.5e-46 188.7 159 60.4
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 3.5e-46 188.7 159 60.4
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 3.5e-46 188.7 158 60.8
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 4.6e-46 188.3 164 56.1
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 6.0e-46 188.0 162 59.9
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 6.0e-46 188.0 162 58.0
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 1.3e-45 186.8 160 57.5
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 1.3e-45 186.8 162 59.3
Gohir.A01G176651 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.3e-45 186.8 159 59.7
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.3e-45 186.0 162 59.3
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 5.1e-45 184.9 163 55.8
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 1.9e-44 183.0 154 55.8
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 3.3e-44 182.2 165 53.3
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 4.3e-44 181.8 166 57.2
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 2.1e-43 179.5 163 55.8
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 3.6e-43 178.7 149 53.7
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 4.8e-43 178.3 162 54.3
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.1e-42 177.2 160 56.2
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 1.1e-42 177.2 165 58.2
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 2.4e-42 176.0 161 55.3
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 2.4e-42 176.0 161 55.3
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 3.1e-42 175.6 161 54.7
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 3.1e-42 175.6 161 54.7
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 3.1e-42 175.6 162 53.1
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 3.1e-42 175.6 160 56.2
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 3.1e-42 175.6 162 52.5
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 4.0e-42 175.3 162 51.9
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 6.9e-42 174.5 162 51.9
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 9.0e-42 174.1 145 55.2
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 9.0e-42 174.1 143 62.2
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 1.5e-41 173.3 152 59.2
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.6e-41 172.6 162 51.9
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 7.6e-41 171.0 162 55.6
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 1.3e-40 170.2 163 52.1
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 1.3e-40 170.2 163 52.8
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 1.7e-40 169.9 150 54.0
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 2.9e-40 169.1 162 53.1
CARHR230010 Cardamine hirsuta HOM05D002759 ORTHO05D003290 3.8e-40 168.7 162 54.3
GSVIVG01005672001 Vitis vinifera HOM05D002759 ORTHO05D003290 6.4e-40 167.9 83 95.2
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 1.1e-39 167.2 145 55.2
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 1.1e-39 167.2 162 53.7
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 2.4e-39 166.0 158 56.3
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 2.4e-39 166.0 162 50.0
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 2.4e-39 166.0 162 51.9
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 2.4e-39 166.0 162 50.6
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 5.4e-39 164.9 162 50.0
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 1.2e-38 163.7 162 50.0
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 1.2e-38 163.7 162 50.0
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 2.7e-38 162.5 161 50.9
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 1.0e-37 160.6 157 51.6
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 3.0e-37 159.1 154 51.9
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 3.9e-37 158.7 147 55.1
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 6.7e-37 157.9 162 50.0
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 1.9e-36 156.4 161 49.7
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 2.5e-36 156.0 160 53.8
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 3.3e-36 155.6 165 47.9
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 3.3e-36 155.6 161 49.7
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 3.3e-36 155.6 161 49.7
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 3.3e-36 155.6 161 49.7
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 5.6e-36 154.8 143 51.0
MSTRG.16534 Avicennia marina HOM05D002759 ORTHO05D003290 9.6e-36 154.1 157 51.0
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 9.6e-36 154.1 163 48.5
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 1.3e-35 153.7 150 50.0
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 1.3e-35 153.7 145 57.2
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 1.6e-35 153.3 160 52.5
FAN04G1156 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.8e-35 152.5 166 50.6
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 4.0e-34 148.7 163 50.3
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 9.0e-34 147.5 162 48.1
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 1.2e-33 147.1 144 54.9
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.2e-33 147.1 154 49.4
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 2.6e-33 146.0 144 54.2
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 3.4e-33 145.6 150 48.7
CARHR254480 Cardamine hirsuta HOM05D002759 ORTHO05D003290 7.6e-33 144.4 148 51.4
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 7.6e-33 144.4 160 47.5
Hund21015 Selenicereus undatus HOM05D002759 ORTHO05D003290 3.8e-32 142.1 146 51.4
FAN13G1302 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.5e-31 139.4 181 44.2
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 1.6e-30 136.7 138 48.6
BcaB02g09105 Brassica carinata HOM05D002759 ORTHO05D003290 1.3e-29 133.7 151 50.3
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 1.5e-28 130.2 151 42.4
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.9e-28 129.8 152 47.4
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 4.3e-28 128.6 161 44.7
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 1.6e-27 126.7 151 48.3
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 1.6e-27 126.7 144 50.0
C04p12980 Brassica napus HOM05D002759 ORTHO05D003290 2.1e-27 126.3 151 48.3
C04p13030 Brassica napus HOM05D002759 ORTHO05D003290 2.1e-27 126.3 151 48.3
BolC4t22942H Brassica oleracea HOM05D002759 ORTHO05D003290 4.8e-27 125.2 159 45.9
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 1.8e-26 123.2 160 43.8
SHI26609 Sapria himalayana HOM05D002759 ORTHO05D003290 6.9e-26 121.3 150 45.3
Os02g0770700 Oryza sativa ssp. japonica HOM05D002759 ORTHO05D003290 5.0e-24 115.2 145 37.9
Atru.chr12.1442 Acer truncatum HOM05D002759 ORTHO05D003290 8.4e-24 114.4 124 50.8
arahy.Tifrunner.gnm1.ann1.JK8JKR Arachis hypogaea HOM05D002759 ORTHO05D003290 7.1e-23 111.3 143 44.1
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 7.1e-23 111.3 146 39.0
GSVIVG01011206001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.8e-21 106.7 51 92.2
HPP92_009112 Vanilla planifolia HOM05D002759 ORTHO05D003290 5.1e-21 105.1 143 39.2
GSVIVG01038033001 Vitis vinifera HOM05D002759 ORTHO05D003290 6.7e-21 104.8 51 90.2
Oeu043988.1 Olea europaea HOM05D002759 ORTHO05D003290 1.5e-20 103.6 125 46.4
ATR0661G182 Amborella trichopoda HOM05D002759 ORTHO05D003290 6.3e-19 98.2 90 53.3
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 6.3e-19 98.2 162 38.3
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 6.3e-19 98.2 162 38.3
Hund17373 Selenicereus undatus HOM05D002759 ORTHO05D003290 1.1e-18 97.4 95 45.3
vmacro01780 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 1.3e-16 90.5 66 60.6
vmacro18627 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 9.4e-15 84.3 78 51.3
SEGI_09006 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.0e-13 80.9 151 34.4
SEGI_24894 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 6.7e-13 78.2 151 34.4
SEGI_00066 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 2.5e-12 76.3 150 33.3
FAN08G3490 Fragaria x ananassa HOM05D002759 ORTHO05D003290 5.7e-12 75.1 72 58.3
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 2.8e-11 72.8 112 41.1
BolC4t22359H Brassica oleracea HOM05D002759 ORTHO05D003290 2.8e-11 72.8 112 41.1


User provided reference genes

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