Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032123001 Vitis vinifera HOM05D001835 ORTHO05D001899 3.9e-102 374.8 186 100.0
GSVIVG01036888001 Vitis vinifera HOM05D001835 ORTHO05D001899 1.8e-54 216.5 140 77.9
QL12p003581 Quercus lobata HOM05D001835 ORTHO05D001899 5.5e-24 115.2 141 51.1
CiPaw.12G055600 Carya illinoinensis HOM05D001835 ORTHO05D001899 2.6e-21 106.3 141 47.5
Haze_08423 Corylus avellana HOM05D001835 ORTHO05D001899 4.9e-20 102.1 141 48.2
Thecc.03G320500 Theobroma cacao HOM05D001835 ORTHO05D001899 4.9e-20 102.1 140 42.9
TAR629G1157 Trochodendron aralioides HOM05D001835 ORTHO05D001899 4.1e-19 99.0 140 47.1
Duzib068G1023 Durio zibethinus HOM05D001835 ORTHO05D001899 1.6e-18 97.1 144 41.0
Cfa012307 Carpinus fangiana HOM05D001835 ORTHO05D001899 1.0e-17 94.4 141 46.1
Rhsim11G0037800 Rhododendron simsii HOM05D001835 ORTHO05D001899 3.9e-17 92.4 139 43.9
COL.COLO4_16746 Corchorus olitorius HOM05D001835 ORTHO05D001899 6.6e-17 91.7 135 43.7
MD06G1011200 Malus domestica HOM05D001835 ORTHO05D001899 8.6e-17 91.3 134 41.0
FAN08G0398 Fragaria x ananassa HOM05D001835 ORTHO05D001899 1.1e-16 90.9 141 41.8
FAN04G1534 Fragaria x ananassa HOM05D001835 ORTHO05D001899 1.5e-16 90.5 117 45.3
RcHm_v2.0_Chr7g0215271 Rosa chinensis HOM05D001835 ORTHO05D001899 2.5e-16 89.7 141 42.6
Duzib205G1377 Durio zibethinus HOM05D001835 ORTHO05D001899 4.3e-16 89.0 144 40.3
Ciclev10011410m.g Citrus clementina HOM05D001835 ORTHO05D001899 6.1e-15 85.1 139 43.2
FvH4_5g24990 Fragaria vesca HOM05D001835 ORTHO05D001899 6.1e-15 85.1 117 43.6
FAN18G0528 Fragaria x ananassa HOM05D001835 ORTHO05D001899 6.8e-14 81.6 117 42.7
Dinv37433 Davidia involucrata HOM05D001835 ORTHO05D001899 8.9e-14 81.3 134 38.8
TWI60G1275 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 7.5e-13 78.2 144 39.6
Phvul.002G122400 Phaseolus vulgaris HOM05D001835 ORTHO05D001899 1.7e-12 77.0 141 39.0
Atru.chr8.2612 Acer truncatum HOM05D001835 ORTHO05D001899 4.9e-12 75.5 139 40.3
Glyma.01G153100 Glycine max HOM05D001835 ORTHO05D001899 5.4e-11 72.0 155 34.2
MD16G1286000 Malus domestica HOM05D001835 ORTHO05D001899 1.6e-10 70.5 120 39.2
Cc08_g06000 Coffea canephora HOM05D001835 ORTHO05D001899 4.6e-10 68.9 140 35.0
Glyma.09G218400 Glycine max HOM05D001835 ORTHO05D001899 1.0e-09 67.8 147 35.4
Potri.017G111500 Populus trichocarpa HOM05D001835 ORTHO05D001899 2.3e-09 66.6 137 33.6
Manes.17G004032 Manihot esculenta HOM05D001835 ORTHO05D001899 3.0e-09 66.2 123 39.8
Nn4g23689 Nelumbo nucifera HOM05D001835 ORTHO05D001899 3.0e-09 66.2 141 34.8
Nn1g09336 Nelumbo nucifera HOM05D001835 ORTHO05D001899 6.6e-09 65.1 146 39.0
Nn3g17682 Nelumbo nucifera HOM05D001835 ORTHO05D001899 4.3e-08 62.4 116 37.1
Potri.004G104000 Populus trichocarpa HOM05D001835 ORTHO05D001899 5.6e-08 62.0 137 32.8
Phvul.003G025700 Phaseolus vulgaris HOM05D001835 ORTHO05D001899 7.3e-08 61.6 139 35.3
Phvul.003G025600 Phaseolus vulgaris HOM05D001835 ORTHO05D001899 1.6e-07 60.5 137 34.3
PGR031G1667 Punica granatum HOM05D001835 ORTHO05D001899 1.6e-07 60.5 147 35.4
Cfa018648 Carpinus fangiana HOM05D001835 ORTHO05D001899 2.8e-07 59.7 137 32.1
Haze_17420 Corylus avellana HOM05D001835 ORTHO05D001899 3.6e-07 59.3 137 32.1
ATR0568G041 Amborella trichopoda HOM05D001835 ORTHO05D001899 4.7e-07 58.9 119 35.3
CiPaw.15G002300 Carya illinoinensis HOM05D001835 ORTHO05D001899 4.7e-07 58.9 139 31.7
TPR.G2658 Trifolium pratense HOM05D001835 ORTHO05D001899 4.7e-07 58.9 140 33.6
TWI75G0523 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 4.7e-07 58.9 137 33.6
Lalb_Chr17g0341831 Lupinus albus HOM05D001835 ORTHO05D001899 6.2e-07 58.5 137 35.0
FAN17G0213 Fragaria x ananassa HOM05D001835 ORTHO05D001899 1.4e-06 57.4 155 31.0
Lalb_Chr10g0099641 Lupinus albus HOM05D001835 ORTHO05D001899 1.4e-06 57.4 102 37.3
MD16G1049700 Malus domestica HOM05D001835 ORTHO05D001899 1.4e-06 57.4 137 33.6
TWI79G0885 Tripterygium wilfordii HOM05D001835 ORTHO05D001899 1.4e-06 57.4 137 32.1
FAN22G2087 Fragaria x ananassa HOM05D001835 ORTHO05D001899 1.8e-06 57.0 148 30.4
Actinidia13684 Actinidia chinensis HOM05D001835 ORTHO05D001899 2.3e-06 56.6 141 33.3
VMungo1215G2398 Vigna mungo HOM05D001835 ORTHO05D001899 2.3e-06 56.6 137 32.1
Glyma.01G089900 Glycine max HOM05D001835 ORTHO05D001899 3.1e-06 56.2 138 34.8
CiPaw.04G039800 Carya illinoinensis HOM05D001835 ORTHO05D001899 4.0e-06 55.8 140 34.3
CiPaw.16G002300 Carya illinoinensis HOM05D001835 ORTHO05D001899 4.0e-06 55.8 137 32.8
FAN02G1426 Fragaria x ananassa HOM05D001835 ORTHO05D001899 4.0e-06 55.8 126 34.1
FAN05G5321 Fragaria x ananassa HOM05D001835 ORTHO05D001899 4.0e-06 55.8 133 33.8
FAN14G0166 Fragaria x ananassa HOM05D001835 ORTHO05D001899 4.0e-06 55.8 128 33.6
Glyma.02G101500 Glycine max HOM05D001835 ORTHO05D001899 5.2e-06 55.5 138 34.1
Glyma.02G101700 Glycine max HOM05D001835 ORTHO05D001899 5.2e-06 55.5 138 34.1
Duzib138G0661 Durio zibethinus HOM05D001835 ORTHO05D001899 6.8e-06 55.1 137 32.8
arahy.Tifrunner.gnm1.ann1.3FFR1F Arachis hypogaea HOM05D001835 ORTHO05D001899 8.9e-06 54.7 139 36.0
arahy.Tifrunner.gnm1.ann1.AG49XH Arachis hypogaea HOM05D001835 ORTHO05D001899 8.9e-06 54.7 139 36.0
arahy.Tifrunner.gnm1.ann1.L2NYG1 Arachis hypogaea HOM05D001835 ORTHO05D001899 8.9e-06 54.7 142 37.3
vmacro10569 Vaccinium macrocarpon HOM05D001835 ORTHO05D001899 8.9e-06 54.7 104 39.4


User provided reference genes

Program Settings