Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 1.1e-68 263.5 169 100.0
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 5.7e-60 234.6 169 79.3
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 3.1e-58 228.8 169 79.3
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 4.1e-58 228.4 169 89.3
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 1.2e-57 226.9 169 80.5
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 3.5e-57 225.3 169 78.7
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 1.5e-55 219.9 170 78.2
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 4.2e-55 218.4 169 81.1
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 2.7e-54 215.7 169 83.4
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 3.6e-54 215.3 182 72.0
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 4.7e-54 214.9 170 85.3
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.8e-53 213.0 172 73.3
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 2.3e-53 212.6 173 79.2
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 3.0e-53 212.2 170 71.2
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 3.0e-53 212.2 173 82.7
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 3.0e-53 212.2 169 81.7
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 5.2e-53 211.5 171 84.8
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 5.2e-53 211.5 200 66.5
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 1.2e-52 210.3 169 78.7
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 1.2e-52 210.3 173 83.8
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 2.0e-52 209.5 171 83.0
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 2.6e-52 209.1 169 75.7
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 4.4e-52 208.4 178 75.3
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 7.5e-52 207.6 170 80.6
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 3.7e-51 205.3 171 77.8
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 6.3e-51 204.5 183 74.3
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 6.3e-51 204.5 170 82.9
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.8e-50 203.0 173 72.8
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 4.1e-50 201.8 170 74.1
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 4.1e-50 201.8 167 70.1
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 4.1e-50 201.8 102 89.2
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 5.3e-50 201.4 102 91.2
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 5.3e-50 201.4 169 61.5
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 7.0e-50 201.1 202 61.4
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 2.0e-49 199.5 102 90.2
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 2.7e-49 199.1 170 61.2
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 3.5e-49 198.7 102 88.2
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 5.9e-49 198.0 167 70.7
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 1.3e-48 196.8 168 79.2
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 1.3e-48 196.8 101 88.1
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 1.3e-48 196.8 171 78.9
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 1.7e-48 196.4 101 89.1
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 2.2e-48 196.1 168 59.5
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 2.9e-48 195.7 102 88.2
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 3.8e-48 195.3 168 75.6
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 5.0e-48 194.9 102 86.3
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 5.0e-48 194.9 203 52.7
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 5.0e-48 194.9 101 87.1
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 6.5e-48 194.5 102 87.3
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 8.5e-48 194.1 102 86.3
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 1.1e-47 193.7 101 88.1
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 1.5e-47 193.4 102 86.3
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 1.9e-47 193.0 163 77.9
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 1.9e-47 193.0 165 74.5
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 2.5e-47 192.6 102 85.3
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 3.2e-47 192.2 176 73.9
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 5.5e-47 191.4 101 87.1
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 7.2e-47 191.0 236 61.4
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 1.2e-46 190.3 169 75.1
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 2.1e-46 189.5 168 75.0
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 4.7e-46 188.3 168 76.2
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 6.1e-46 188.0 102 85.3
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 6.1e-46 188.0 102 85.3
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 6.1e-46 188.0 102 85.3
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 8.0e-46 187.6 102 82.4
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 1.0e-45 187.2 102 83.3
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 1.4e-45 186.8 198 66.7
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 3.0e-45 185.7 102 83.3
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 1.2e-44 183.7 99 82.8
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 1.2e-44 183.7 168 72.0
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 1.2e-44 183.7 168 70.8
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 2.0e-44 183.0 198 67.2
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 2.6e-44 182.6 186 65.6
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 3.4e-44 182.2 168 70.2
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 2.2e-43 179.5 172 64.5
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 2.8e-43 179.1 181 60.2
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.8e-43 179.1 223 48.4
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 3.1e-42 175.6 93 88.2
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 3.1e-42 175.6 91 86.8
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 3.1e-42 175.6 173 68.2
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 4.5e-41 171.8 102 76.5
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 5.0e-40 168.3 102 79.4
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 5.5e-39 164.9 101 72.3
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 5.5e-39 164.9 93 80.6
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 3.6e-38 162.2 200 64.0
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 4.7e-38 161.8 173 71.7
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 8.9e-37 157.5 101 69.3
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 4.4e-36 155.2 135 60.0
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 9.8e-36 154.1 102 72.5
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 1.3e-35 153.7 101 68.3
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 2.8e-35 152.5 129 62.8
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 1.8e-34 149.8 101 66.3
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 1.2e-30 137.1 72 83.3
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 1.2e-30 137.1 68 88.2
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 2.8e-30 136.0 102 68.6
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 8.0e-30 134.4 69 87.0
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 1.0e-29 134.0 74 78.4
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 7.5e-28 127.9 165 67.9
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 1.1e-26 124.0 278 32.7
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 1.4e-26 123.6 107 59.8
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 1.6e-25 120.2 171 55.0
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 3.5e-25 119.0 72 69.4
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 6.2e-22 108.2 200 37.5
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 1.1e-21 107.5 189 38.1
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 1.8e-21 106.7 112 51.8
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 2.9e-19 99.4 49 91.8
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 6.4e-19 98.2 122 65.6
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 9.2e-18 94.4 48 85.4
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 3.3e-15 85.9 54 75.9
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 4.1e-10 68.9 36 80.6
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 4.6e-09 65.5 35 85.7
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 7.8e-09 64.7 34 88.2
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 2.5e-07 59.7 34 76.5


User provided reference genes

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