Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 4.7e-73 277.7 134 100.0
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 1.2e-20 103.6 114 51.8
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 1.2e-20 103.6 83 61.4
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 7.8e-20 100.9 115 47.8
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 3.9e-19 98.6 104 49.0
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 5.1e-19 98.2 99 51.5
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 1.9e-18 96.3 107 49.5
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 1.9e-18 96.3 98 57.1
Glyma.12G044400 Glycine max HOM05D007227 ORTHO05D002252 2.8e-17 92.4 91 56.0
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 6.2e-17 91.3 81 55.6
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 1.1e-16 90.5 113 50.4
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 2.3e-16 89.4 101 47.5
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 8.9e-16 87.4 88 47.7
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 1.5e-15 86.7 116 46.6
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 1.5e-15 86.7 101 47.5
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 1.5e-15 86.7 100 49.0
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 2.6e-15 85.9 111 45.0
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 3.4e-15 85.5 81 51.9
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 3.4e-15 85.5 87 50.6
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 3.4e-15 85.5 97 48.5
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 4.4e-15 85.1 86 51.2
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 5.8e-15 84.7 116 45.7
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 5.8e-15 84.7 116 44.8
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 7.6e-15 84.3 116 45.7
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 7.6e-15 84.3 87 50.6
LjContig00272g0019714 Lotus japonicus HOM05D007227 ORTHO05D002252 7.6e-15 84.3 82 51.2
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.3e-14 83.6 87 49.4
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 1.7e-14 83.2 86 48.8
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 1.7e-14 83.2 87 49.4
Duzib132G0468 Durio zibethinus HOM05D007227 ORTHO05D002252 2.2e-14 82.8 101 48.5
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.2e-14 82.8 87 49.4
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 2.9e-14 82.4 86 50.0
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.9e-14 82.4 87 48.3
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 2.9e-14 82.4 81 49.4
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 3.7e-14 82.0 87 50.6
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 3.7e-14 82.0 109 45.9
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 3.7e-14 82.0 87 49.4
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 4.9e-14 81.6 87 48.3
SalBow3G1687 Salvia bowleyana HOM05D007227 ORTHO05D002252 4.9e-14 81.6 100 46.0
TPR.G8589 Trifolium pratense HOM05D007227 ORTHO05D002252 4.9e-14 81.6 81 51.9
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 8.4e-14 80.9 81 50.6
CSS0026369 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 1.1e-13 80.5 78 46.2
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 1.4e-13 80.1 123 40.7
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 1.9e-13 79.7 83 51.8
Lj9C368G9 Lonicera japonica HOM05D007227 ORTHO05D002252 1.9e-13 79.7 74 50.0
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 1.9e-13 79.7 86 46.5
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 1.9e-13 79.7 93 48.4
Rhsim11G0174800 Rhododendron simsii HOM05D007227 ORTHO05D002252 3.2e-13 79.0 86 50.0
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 4.1e-13 78.6 90 45.6
MD10G1078100 Malus domestica HOM05D007227 ORTHO05D002252 4.1e-13 78.6 81 53.1
Prupe.8G099800 Prunus persica HOM05D007227 ORTHO05D002252 5.4e-13 78.2 115 41.7
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 5.4e-13 78.2 91 48.4
MSTRG.20093 Avicennia marina HOM05D007227 ORTHO05D002252 9.2e-13 77.4 88 46.6
LjContig00081g0025580 Lotus japonicus HOM05D007227 ORTHO05D002252 1.6e-12 76.6 87 50.6
COL.COLO4_17856 Corchorus olitorius HOM05D007227 ORTHO05D002252 2.1e-12 76.3 95 51.6
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 2.1e-12 76.3 108 42.6
CSS0037950 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 3.5e-12 75.5 96 41.7
TWI75G0964 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 3.5e-12 75.5 87 49.4
EL10Ac9g21739 Beta vulgaris HOM05D007227 ORTHO05D002252 4.6e-12 75.1 90 46.7
AUR62011338 Chenopodium quinoa HOM05D007227 ORTHO05D002252 4.6e-12 75.1 77 49.4
CSS0038929 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 6.0e-12 74.7 118 34.7
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 1.0e-11 73.9 103 47.6
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 2.3e-11 72.8 92 43.5
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 2.3e-11 72.8 89 43.8
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 2.3e-11 72.8 102 39.2
Manes.17G100100 Manihot esculenta HOM05D007227 ORTHO05D002252 3.0e-11 72.4 86 44.2
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 3.9e-11 72.0 104 44.2
FAN24G0729 Fragaria x ananassa HOM05D007227 ORTHO05D002252 3.9e-11 72.0 90 47.8
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 5.1e-11 71.6 84 41.7
Medtr3g007880 Medicago truncatula HOM05D007227 ORTHO05D002252 5.1e-11 71.6 89 49.4
Phvul.009G024600 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 5.1e-11 71.6 83 50.6
TWI31G1433 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 6.6e-11 71.2 100 46.0
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 1.1e-10 70.5 104 33.7
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.5e-10 70.1 90 41.1
MSTRG.27703 Avicennia marina HOM05D007227 ORTHO05D002252 1.9e-10 69.7 75 45.3
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 1.9e-10 69.7 96 35.4
Sc08g0000440 Simmondsia chinensis HOM05D007227 ORTHO05D002252 1.9e-10 69.7 85 45.9
Cc07_g14570 Coffea canephora HOM05D007227 ORTHO05D002252 3.3e-10 68.9 96 38.5
Potri.004G153200 Populus trichocarpa HOM05D007227 ORTHO05D002252 3.3e-10 68.9 81 48.1
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 3.3e-10 68.9 96 35.4
Psat2g007160 Pisum sativum HOM05D007227 ORTHO05D002252 4.3e-10 68.6 85 47.1
Sed0019925 Sechium edule HOM05D007227 ORTHO05D002252 4.3e-10 68.6 82 39.0
Psat2g007200 Pisum sativum HOM05D007227 ORTHO05D002252 5.6e-10 68.2 85 48.2
CsaV3_2G014630 Cucumis sativus L. HOM05D007227 ORTHO05D002252 7.3e-10 67.8 95 37.9
Manes.15G164600 Manihot esculenta HOM05D007227 ORTHO05D002252 7.3e-10 67.8 102 43.1
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 7.3e-10 67.8 102 36.3
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 9.6e-10 67.4 94 41.5
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 1.2e-09 67.0 116 36.2
Hund00277 Selenicereus undatus HOM05D013587 ORTHO05D002252 1.2e-09 67.0 63 52.4
arahy.Tifrunner.gnm1.ann1.YB55U6 Arachis hypogaea HOM05D007227 ORTHO05D002252 1.6e-09 66.6 83 41.0
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 1.6e-09 66.6 85 44.7
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 1.6e-09 66.6 85 44.7
EL10Ac9g21743 Beta vulgaris HOM05D013587 ORTHO05D002252 2.1e-09 66.2 62 51.6
Potri.009G114400 Populus trichocarpa HOM05D007227 ORTHO05D002252 2.1e-09 66.2 83 47.0
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 2.1e-09 66.2 100 37.0
PGR142G1531 Punica granatum HOM05D007227 ORTHO05D002252 2.8e-09 65.9 126 37.3
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 3.6e-09 65.5 94 43.6
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 3.6e-09 65.5 89 40.4
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 3.6e-09 65.5 100 38.0
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 4.7e-09 65.1 93 39.8
Lsat_1_v5_gn_9_109540 Lactuca sativa HOM05D007227 ORTHO05D002252 6.2e-09 64.7 65 44.6
Peaxi162Scf00016g00938 Petunia axillaris HOM05D007227 ORTHO05D002252 6.2e-09 64.7 94 38.3
arahy.Tifrunner.gnm1.ann1.24P8DN Arachis hypogaea HOM05D007227 ORTHO05D002252 8.1e-09 64.3 75 42.7
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 8.1e-09 64.3 89 34.8
Ah.01g019500 Amaranthus hybridus HOM05D007227 ORTHO05D002252 1.1e-08 63.9 90 42.2
AUR62011343 Chenopodium quinoa HOM05D013587 ORTHO05D002252 1.1e-08 63.9 76 44.7
AUR62011345 Chenopodium quinoa HOM05D013587 ORTHO05D002252 1.1e-08 63.9 76 44.7
Nitab4.5_0001794g0120 Nicotiana tabacum HOM05D007227 ORTHO05D002252 1.1e-08 63.9 88 40.9
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.1e-08 63.9 89 38.2
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.4e-08 63.5 89 39.3
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.8e-08 63.2 94 42.6
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 2.4e-08 62.8 79 40.5
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 2.4e-08 62.8 101 37.6
arahy.Tifrunner.gnm1.ann1.3LC685 Arachis hypogaea HOM05D007227 ORTHO05D002252 4.0e-08 62.0 75 41.3
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 5.2e-08 61.6 100 36.0
AUR62016714 Chenopodium quinoa HOM05D013587 ORTHO05D002252 8.9e-08 60.8 72 45.8
ClCG11G004490 Citrullus lanatus HOM05D007227 ORTHO05D002252 1.2e-07 60.5 84 38.1
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.2e-07 60.5 78 44.9
Migut.N01231 Erythranthe guttata HOM05D007227 ORTHO05D002252 1.2e-07 60.5 86 37.2
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 1.2e-07 60.5 89 40.4
HanXRQChr01g0007701 Helianthus annuus HOM05D017364 ORTHO05D002252 1.2e-07 60.5 91 34.1
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.2e-07 60.5 90 36.7
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.5e-07 60.1 62 46.8
Peaxi162Scf00003g01323 Petunia axillaris HOM05D007227 ORTHO05D002252 2.0e-07 59.7 98 34.7
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 2.6e-07 59.3 97 35.1
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 2.6e-07 59.3 112 37.5
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 2.6e-07 59.3 86 33.7
EL10Ac4g09227 Beta vulgaris HOM05D037403 ORTHO05D002252 3.4e-07 58.9 73 45.2
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.8e-07 58.2 96 36.5
PGR042G2841 Punica granatum HOM05D007227 ORTHO05D002252 5.8e-07 58.2 91 42.9
Hund00291 Selenicereus undatus HOM05D013587 ORTHO05D002252 7.6e-07 57.8 72 43.1
GSVIVG01031946001 Vitis vinifera HOM05D007556 ORTHO05D002252 7.6e-07 57.8 116 36.2
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 9.9e-07 57.4 121 32.2
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 9.9e-07 57.4 80 42.5
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 9.9e-07 57.4 124 33.9
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 9.9e-07 57.4 89 39.3
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.9e-07 57.4 138 33.3
Psat7g116800 Pisum sativum HOM05D010359 ORTHO05D002252 9.9e-07 57.4 66 39.4
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 9.9e-07 57.4 89 37.1
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 1.3e-06 57.0 99 32.3
Atru.chr5.2993 Acer truncatum HOM05D007227 ORTHO05D002252 1.7e-06 56.6 104 38.5
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.7e-06 56.6 85 37.6
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 1.7e-06 56.6 95 33.7
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 2.2e-06 56.2 64 42.2
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 3.8e-06 55.5 74 37.8
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 3.8e-06 55.5 85 36.5
Ciclev10013967m.g Citrus clementina HOM05D060443 ORTHO05D002252 4.9e-06 55.1 90 36.7
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 4.9e-06 55.1 84 35.7
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.9e-06 55.1 81 34.6
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 4.9e-06 55.1 79 41.8
HanXRQChr13g0410611 Helianthus annuus HOM05D017364 ORTHO05D002252 8.4e-06 54.3 79 34.2
HanXRQChr16g0524731 Helianthus annuus HOM05D017364 ORTHO05D002252 8.4e-06 54.3 84 31.0


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