Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 0.0e+00 1080.9 558 100.0
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 5.2e-251 870.9 558 79.4
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 7.5e-250 867.1 560 78.4
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 5.0e-246 854.4 551 79.1
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 1.5e-245 852.8 563 78.3
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 1.4e-243 846.3 561 76.8
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 2.3e-243 845.5 546 78.0
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 2.0e-242 842.4 557 77.2
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 4.4e-242 841.3 550 78.4
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 4.4e-242 841.3 558 76.7
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 2.2e-241 839.0 558 76.7
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 5.4e-240 834.3 557 78.8
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 7.0e-240 833.9 553 77.2
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 2.7e-239 832.0 562 74.9
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 4.5e-239 831.2 557 76.3
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.9e-237 825.9 546 76.0
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 2.1e-236 822.4 558 75.1
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 4.4e-234 814.7 559 74.4
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 9.8e-234 813.5 554 74.5
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 1.3e-233 813.1 516 79.3
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 4.9e-233 811.2 548 74.3
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 6.4e-233 810.8 556 75.2
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 8.3e-233 810.4 519 77.6
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 3.2e-232 808.5 559 74.4
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 9.2e-232 807.0 558 72.6
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 1.2e-231 806.6 557 72.5
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.6e-231 806.2 555 75.1
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 6.0e-231 804.3 562 74.0
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 1.3e-230 803.1 566 73.3
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 1.7e-230 802.7 558 74.7
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 3.0e-230 802.0 562 72.8
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 5.0e-230 801.2 550 73.5
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 2.5e-229 798.9 556 73.0
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 2.5e-229 798.9 532 75.4
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 3.3e-229 798.5 556 72.8
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 4.3e-229 798.1 548 72.4
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 5.6e-229 797.7 560 72.5
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 7.3e-229 797.3 556 72.8
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 2.3e-227 792.3 522 77.6
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 5.2e-227 791.2 563 72.8
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 5.2e-227 791.2 556 72.3
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 1.2e-226 790.0 519 76.7
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 1.5e-226 789.6 565 73.1
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 3.4e-226 788.5 563 71.2
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 3.4e-226 788.5 537 74.3
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 7.5e-226 787.3 565 72.9
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 9.8e-226 786.9 562 72.1
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 1.7e-225 786.2 511 78.3
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 2.9e-225 785.4 564 72.5
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 4.9e-225 784.6 542 73.4
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 4.9e-225 784.6 522 75.9
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 6.4e-225 784.3 565 72.2
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 1.4e-224 783.1 548 73.2
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 4.1e-224 781.6 536 74.1
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 4.1e-224 781.6 552 72.5
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 5.4e-224 781.2 521 74.7
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 4.6e-223 778.1 537 73.0
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 7.8e-223 777.3 561 72.7
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 7.8e-223 777.3 562 71.2
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 7.8e-223 777.3 550 71.5
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 1.0e-222 776.9 545 72.5
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 1.7e-222 776.2 519 75.7
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 1.1e-221 773.5 549 72.7
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 3.3e-221 771.9 522 74.3
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 3.3e-221 771.9 549 72.5
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 4.3e-221 771.5 505 76.2
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 5.6e-221 771.2 518 74.9
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 5.6e-221 771.2 530 73.2
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 9.5e-221 770.4 535 72.0
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 9.5e-221 770.4 556 72.1
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 1.2e-220 770.0 519 75.0
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.6e-220 769.6 576 70.0
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 4.7e-220 768.1 513 75.2
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 1.4e-219 766.5 549 71.9
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 2.6e-218 762.3 522 73.6
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 4.9e-217 758.1 549 71.6
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 6.4e-217 757.7 482 78.4
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 4.1e-216 755.0 517 73.9
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 4.1e-216 755.0 514 75.1
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 4.1e-216 755.0 547 70.0
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 5.4e-216 754.6 575 69.2
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 7.1e-216 754.2 505 74.3
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 9.2e-216 753.8 563 69.8
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 3.5e-215 751.9 545 71.0
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 7.8e-215 750.7 542 69.7
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 7.8e-215 750.7 522 73.4
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 7.8e-215 750.7 606 65.5
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 1.3e-214 750.0 516 73.4
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 4.7e-212 741.5 448 79.7
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 8.1e-212 740.7 545 70.3
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 6.8e-211 737.6 575 68.5
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 1.2e-210 736.9 445 79.8
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 1.5e-210 736.5 482 74.9
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 8.4e-209 730.7 428 80.6
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 1.1e-208 730.3 533 71.1
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 1.0e-206 723.8 504 71.0
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 3.8e-201 705.3 565 68.1
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 4.8e-188 661.8 372 85.5
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 3.0e-182 642.5 420 75.5
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 9.6e-181 637.5 567 59.1
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.2e-167 594.0 386 78.2
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 1.0e-161 574.3 420 71.2
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 3.3e-157 559.3 434 60.8
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 2.8e-156 556.2 440 60.5
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 2.4e-155 553.1 399 70.9
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 9.7e-149 531.2 435 58.4
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 1.4e-139 500.7 447 54.8
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 7.5e-117 425.2 509 46.4
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 1.1e-115 421.4 525 48.8
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 6.6e-113 412.1 530 43.8
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.8e-111 406.8 516 48.3
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 4.7e-111 406.0 450 50.9
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 8.9e-110 401.7 453 49.9
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 1.1e-107 394.8 516 48.3
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.9e-104 384.0 255 75.7
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.5e-104 383.6 563 46.0
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 3.3e-104 383.3 483 43.5
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 5.4e-99 365.9 519 46.4
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 8.4e-84 315.5 176 85.2
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 6.0e-82 309.3 481 38.9
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 2.4e-75 287.3 169 80.5
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 6.5e-60 236.1 211 65.4
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 9.4e-51 205.7 162 66.7
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 1.3e-39 168.7 137 64.2
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 8.2e-39 166.0 133 65.4
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 6.7e-33 146.4 86 81.4
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 2.4e-30 137.9 105 66.7
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 3.4e-24 117.5 141 44.7
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 8.3e-23 112.8 104 62.5
QL11p041915 Quercus lobata HOM05D005713 ORTHO05D021118 1.5e-19 102.1 141 54.6
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 3.2e-19 100.9 58 84.5
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 4.9e-15 87.0 136 45.6
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.6e-13 82.0 115 45.2
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 2.0e-13 81.6 141 46.1
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 3.3e-11 74.3 113 45.1
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 3.7e-07 60.8 38 76.3


User provided reference genes

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