Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 5.9e-109 397.5 195 100.0
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 7.0e-70 267.7 206 68.4
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 9.2e-70 267.3 204 68.6
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.0e-68 263.8 175 71.4
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 2.9e-68 262.3 188 69.1
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 3.8e-68 261.9 210 66.7
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 5.0e-68 261.5 199 64.8
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 2.5e-67 259.2 199 63.8
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 2.5e-67 259.2 210 63.8
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 3.3e-67 258.8 175 71.4
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 4.3e-67 258.5 187 67.9
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 1.2e-66 256.9 177 70.6
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.6e-66 256.5 198 63.6
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 4.7e-66 255.0 175 71.4
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 4.7e-66 255.0 176 72.2
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.0e-65 253.8 199 66.3
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.4e-65 253.4 184 66.8
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.4e-65 253.4 192 65.6
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.8e-65 253.1 207 67.1
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 2.3e-65 252.7 175 70.3
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 3.0e-65 252.3 176 71.6
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 3.0e-65 252.3 195 67.2
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 4.0e-65 251.9 175 72.0
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 4.0e-65 251.9 192 65.1
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 4.0e-65 251.9 199 65.8
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 5.2e-65 251.5 200 65.5
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 6.8e-65 251.1 195 63.6
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 6.8e-65 251.1 187 66.3
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.0e-64 249.6 175 68.0
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.6e-64 249.2 173 71.1
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.6e-64 249.2 176 68.2
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 2.6e-64 249.2 175 68.0
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 3.4e-64 248.8 181 64.1
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 3.4e-64 248.8 175 70.9
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 4.4e-64 248.4 206 64.1
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 5.7e-64 248.1 177 71.2
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 7.5e-64 247.7 175 66.9
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 9.8e-64 247.3 190 66.8
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 2.2e-63 246.1 175 70.3
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 6.4e-63 244.6 196 62.2
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 8.3e-63 244.2 192 64.6
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 8.3e-63 244.2 177 69.5
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.1e-62 243.8 195 63.1
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 1.1e-62 243.8 191 66.0
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 1.4e-62 243.4 190 64.7
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 2.4e-62 242.7 192 64.1
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 3.2e-62 242.3 183 68.3
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 5.4e-62 241.5 173 68.2
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 5.4e-62 241.5 230 59.1
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.2e-61 240.4 171 70.2
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.6e-61 240.0 173 69.9
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 3.5e-61 238.8 183 65.0
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 7.8e-61 237.7 180 65.6
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 1.3e-60 236.9 177 63.3
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 1.7e-60 236.5 176 68.2
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 1.7e-60 236.5 167 67.1
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 6.6e-60 234.6 195 63.1
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 1.1e-59 233.8 173 63.6
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 1.5e-59 233.4 195 63.1
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 1.9e-59 233.0 193 62.2
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 4.3e-59 231.9 175 61.7
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 4.3e-59 231.9 177 63.8
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 5.6e-59 231.5 180 63.9
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 2.1e-58 229.6 210 56.7
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.8e-58 229.2 184 62.5
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 3.6e-58 228.8 211 59.2
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 6.2e-58 228.0 181 65.7
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 1.4e-57 226.9 204 58.3
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.8e-57 226.5 204 59.8
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 2.3e-57 226.1 183 62.8
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.3e-57 226.1 209 58.9
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 3.1e-57 225.7 214 59.3
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 3.1e-57 225.7 174 66.1
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 3.1e-57 225.7 174 66.1
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 3.1e-57 225.7 174 66.1
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 3.1e-57 225.7 198 57.1
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 8.9e-57 224.2 173 65.3
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 8.9e-57 224.2 174 66.1
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 8.9e-57 224.2 180 65.6
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 8.9e-57 224.2 200 56.5
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 8.9e-57 224.2 175 65.1
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.5e-56 223.4 207 59.9
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 2.6e-56 222.6 188 59.0
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 4.4e-56 221.9 174 65.5
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 4.4e-56 221.9 179 59.2
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 4.4e-56 221.9 172 63.4
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 7.5e-56 221.1 207 58.0
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 1.3e-55 220.3 179 58.1
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 1.7e-55 219.9 199 59.3
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 4.9e-55 218.4 168 60.7
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 3.2e-54 215.7 209 56.9
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 3.2e-54 215.7 199 56.8
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 4.1e-54 215.3 200 55.5
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 1.2e-53 213.8 236 53.0
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.7e-53 212.6 206 52.9
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 6.0e-53 211.5 190 57.4
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 5.0e-52 208.4 201 55.7
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 8.6e-52 207.6 152 63.8
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 4.3e-51 205.3 206 51.9
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 2.3e-49 199.5 201 53.7
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 9.9e-48 194.1 180 57.8
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 7.1e-46 188.0 180 56.1
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 4.0e-41 172.2 175 52.6
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 7.6e-40 167.9 213 46.9
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 6.0e-37 158.3 166 48.2
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 5.1e-36 155.2 192 43.2
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 3.3e-35 152.5 167 46.7
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.2e-34 150.6 90 82.2
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 3.1e-33 146.0 161 49.1
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 3.4e-32 142.5 212 42.0
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 3.8e-23 112.5 178 36.0
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 1.4e-22 110.5 68 76.5
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 1.4e-22 110.5 182 35.2
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 2.4e-22 109.8 205 38.0
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 5.4e-22 108.6 92 58.7
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 1.5e-19 100.5 102 52.0
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 3.3e-19 99.4 198 30.8
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 2.9e-15 86.3 132 37.1
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 1.9e-14 83.6 102 46.1
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 2.3e-12 76.6 176 32.4
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.6e-10 70.5 105 39.0


User provided reference genes

Program Settings