Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 2.9e-272 941.4 511 100.0
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 2.8e-203 712.2 486 80.5
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 4.1e-202 708.4 485 78.4
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.1e-198 694.5 486 77.8
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 4.8e-195 684.9 480 76.9
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 8.2e-195 684.1 480 76.9
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 1.4e-189 666.8 461 78.7
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 5.2e-189 664.8 513 72.7
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 1.5e-188 663.3 511 73.0
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 5.7e-188 661.4 513 72.3
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.7e-187 659.8 485 75.5
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 4.5e-185 651.7 485 74.6
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 8.0e-182 641.0 513 69.8
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 2.3e-181 639.4 571 64.4
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 3.0e-181 639.0 485 73.6
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 5.2e-181 638.3 472 75.4
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 1.5e-180 636.7 466 77.0
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.4e-178 630.2 471 73.0
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 2.4e-178 629.4 527 68.5
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 4.5e-177 625.2 513 68.0
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.3e-176 623.6 483 72.5
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 2.2e-176 622.9 507 68.0
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 5.0e-176 621.7 516 69.0
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 6.5e-176 621.3 510 68.0
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.5e-175 619.4 499 70.3
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 3.2e-175 619.0 506 70.2
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 5.5e-175 618.2 506 70.2
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.6e-174 616.7 532 67.1
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.0e-173 614.0 498 69.9
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 2.6e-172 609.4 486 69.5
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 7.5e-172 607.8 510 68.6
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 1.7e-171 606.7 486 71.0
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 3.7e-171 605.5 507 67.7
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 3.7e-171 605.5 514 66.5
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 4.9e-171 605.1 508 65.9
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 1.1e-170 604.0 453 74.4
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.4e-170 603.6 520 67.1
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 2.4e-170 602.8 505 66.1
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 3.1e-170 602.4 512 65.8
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 7.0e-170 601.3 519 68.8
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 2.7e-169 599.4 505 65.5
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 1.3e-168 597.0 514 66.3
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 3.8e-168 595.5 511 67.5
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 5.0e-168 595.1 520 66.9
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 1.2e-166 590.5 477 67.9
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 3.0e-165 585.9 505 64.2
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 8.9e-165 584.3 470 69.4
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 1.2e-164 583.9 479 67.4
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 2.0e-164 583.2 414 75.8
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 3.4e-164 582.4 471 70.1
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 9.8e-164 580.9 473 69.6
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 2.2e-163 579.7 502 67.1
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 5.9e-161 571.6 486 65.8
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.3e-160 570.5 475 68.4
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 3.0e-160 569.3 515 66.2
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 8.6e-160 567.8 429 70.4
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.9e-159 566.6 482 64.9
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 7.3e-159 564.7 513 63.9
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 1.2e-158 563.9 501 64.7
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 1.6e-158 563.5 482 65.1
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 4.4e-156 555.4 473 66.6
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 5.8e-156 555.1 391 75.4
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 2.9e-155 552.7 452 68.6
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 3.7e-155 552.4 526 63.1
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 3.7e-155 552.4 488 64.1
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 2.4e-154 549.7 478 64.4
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 5.4e-154 548.5 480 63.8
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 1.2e-153 547.4 513 62.6
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 1.2e-153 547.4 513 62.6
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.2e-153 547.4 492 63.6
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 2.0e-153 546.6 504 63.5
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 2.7e-153 546.2 512 60.9
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 4.6e-153 545.4 412 72.3
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 7.8e-153 544.7 522 62.6
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.3e-152 543.9 412 72.1
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.1e-151 540.8 413 69.5
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 1.5e-151 540.4 516 61.8
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 3.3e-151 539.3 511 61.1
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 5.6e-151 538.5 512 61.3
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 4.7e-150 535.4 533 60.2
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 1.1e-149 534.3 523 61.0
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 1.8e-149 533.5 409 68.7
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 3.1e-149 532.7 516 60.5
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 3.1e-149 532.7 508 63.6
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 1.5e-148 530.4 522 60.2
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 1.5e-148 530.4 522 60.2
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.6e-148 529.6 475 65.7
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 3.4e-148 529.3 519 60.3
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 7.5e-148 528.1 513 60.2
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 4.9e-147 525.4 533 59.1
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 8.3e-147 524.6 483 62.7
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 1.1e-146 524.2 527 59.4
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 2.4e-146 523.1 423 67.4
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 5.4e-146 521.9 488 62.3
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 2.7e-145 519.6 536 59.0
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 4.6e-145 518.8 389 74.8
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 3.9e-144 515.8 516 60.3
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 1.2e-142 510.8 413 68.5
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 9.9e-140 501.1 391 68.3
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 1.4e-138 497.3 482 59.1
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 3.2e-138 496.1 406 66.7
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 3.2e-138 496.1 402 68.7
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 9.6e-135 484.6 388 66.8
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 3.6e-134 482.6 475 58.1
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 3.6e-134 482.6 409 61.6
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 2.9e-131 473.0 395 64.8
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 3.2e-130 469.5 479 61.0
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 6.6e-128 461.8 363 70.8
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 6.6e-128 461.8 400 66.5
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 8.7e-120 434.9 378 61.6
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 3.7e-118 429.5 362 69.1
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 1.3e-115 421.0 513 50.5
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 2.9e-107 393.3 488 48.0
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 6.7e-104 382.1 314 64.0
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 2.2e-99 367.1 530 43.6
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 2.2e-99 367.1 276 71.7
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 5.0e-99 365.9 276 71.7
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 1.3e-96 357.8 493 44.8
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.8e-93 347.4 287 62.7
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 1.6e-89 334.3 376 58.2
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.8e-88 330.9 338 59.5
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 1.3e-86 324.7 273 68.9
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 1.3e-86 324.7 233 71.7
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 7.4e-79 298.9 307 57.0
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 1.3e-78 298.1 503 40.6
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 6.5e-75 285.8 613 38.3
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 3.2e-74 283.5 476 43.7
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.2e-70 270.8 323 55.7
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 6.5e-67 259.2 177 78.5
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 7.5e-55 219.2 188 71.8
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 2.0e-47 194.5 162 64.8
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 3.7e-46 190.3 143 70.6
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 1.1e-45 188.7 159 64.8
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 7.0e-37 159.5 109 75.2
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 1.1e-32 145.6 108 71.3
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 1.1e-32 145.6 108 71.3
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 1.8e-32 144.8 179 58.7
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.7e-30 138.3 126 58.7
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 4.9e-30 136.7 179 50.8
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 9.9e-23 112.5 131 54.2
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 3.9e-19 100.5 70 75.7
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 6.6e-19 99.8 95 58.9
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 2.5e-18 97.8 107 53.3
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 3.3e-18 97.4 197 39.1
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 2.1e-17 94.7 113 60.2
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 2.8e-17 94.4 57 80.7
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 3.6e-17 94.0 97 57.7
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.8e-16 91.7 75 65.3
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 3.4e-15 87.4 172 39.0
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 2.4e-13 81.3 82 52.4
CSS0012251 Camellia sinensis var. sinensis HOM05D000224 ORTHO05D006043 1.3e-11 75.5 137 46.7
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 5.6e-10 70.1 98 56.1
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.6e-09 68.6 162 35.2
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.8e-09 67.8 153 36.6
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 1.2e-07 62.4 175 28.6
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 3.4e-07 60.8 55 61.8
CAN.G322.73 Capsicum annuum HOM05D004816 ORTHO05D006043 2.9e-06 57.8 66 63.6


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