Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 2.2e-123 445.7 224 100.0
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 7.0e-74 281.2 226 64.2
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 9.2e-74 280.8 223 64.1
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 5.6e-71 271.6 222 62.6
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 2.8e-70 269.2 227 59.9
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 1.4e-69 266.9 227 62.6
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 8.3e-67 257.7 230 60.0
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 4.1e-66 255.4 225 61.8
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 1.2e-65 253.8 255 55.7
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 2.1e-65 253.1 226 58.4
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 3.5e-65 252.3 222 57.2
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 6.0e-65 251.5 219 58.4
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 1.1e-63 247.3 231 57.1
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 1.9e-63 246.5 224 57.6
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 1.4e-61 240.4 223 58.7
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 9.9e-60 234.2 225 56.0
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 1.7e-59 233.4 221 56.6
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 1.4e-58 230.3 210 56.2
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 1.4e-58 230.3 248 51.2
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 2.4e-58 229.6 226 54.9
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 9.2e-58 227.6 226 54.9
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 9.2e-58 227.6 222 54.1
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.2e-57 227.3 222 53.2
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 6.0e-57 224.9 224 53.6
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 6.0e-57 224.9 223 54.3
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.3e-56 223.0 248 50.4
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.5e-55 220.3 234 51.3
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 1.9e-55 219.9 224 51.8
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 1.9e-55 219.9 213 57.3
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 1.9e-55 219.9 227 52.0
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 3.3e-55 219.2 268 47.8
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 9.6e-55 217.6 226 52.2
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 9.6e-55 217.6 226 52.2
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.6e-54 216.9 224 54.0
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 1.4e-53 213.8 223 50.2
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 2.4e-53 213.0 224 53.1
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 1.3e-51 207.2 206 56.8
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 2.2e-51 206.5 245 48.6
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 6.0e-49 198.4 224 51.3
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 3.0e-48 196.1 225 51.1
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 8.7e-48 194.5 207 50.2
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 5.6e-47 191.8 257 44.7
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 3.1e-45 186.0 227 50.7
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.7e-41 172.9 160 60.6
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 6.0e-41 171.8 251 43.0
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 6.0e-41 171.8 223 47.5
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 2.3e-40 169.9 167 56.3
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 5.3e-37 158.7 235 41.3
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 7.6e-36 154.8 187 48.1
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 1.8e-32 143.7 147 55.8
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 7.4e-31 138.3 167 49.1
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 7.4e-31 138.3 167 49.1
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 2.1e-30 136.7 254 37.8
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 4.8e-30 135.6 167 46.7
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 6.9e-29 131.7 172 45.9
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 6.9e-29 131.7 167 47.9
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 6.5e-27 125.2 202 39.1
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 1.6e-25 120.6 217 38.2
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 3.5e-25 119.4 162 47.5
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 1.3e-22 110.9 106 51.9
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.3e-19 100.9 74 64.9
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 8.5e-19 98.2 75 60.0
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 7.7e-12 75.1 48 70.8
QL05p004958 Quercus lobata HOM05D008254 ORTHO05D010423 1.9e-10 70.5 89 44.9


User provided reference genes

Program Settings