Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 3.6e-91 338.2 164 100.0
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 2.6e-65 252.3 166 77.1
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 1.3e-64 250.0 164 75.0
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.8e-63 246.1 170 72.4
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 3.1e-63 245.4 164 72.6
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.6e-62 243.0 172 72.1
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 4.5e-62 241.5 165 73.3
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 1.7e-61 239.6 162 72.8
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 1.1e-60 236.9 163 71.2
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 3.2e-60 235.3 161 71.4
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 3.6e-59 231.9 166 71.1
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 6.1e-59 231.1 169 68.6
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 6.1e-59 231.1 160 76.2
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 8.0e-59 230.7 167 71.9
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.8e-58 229.6 161 69.6
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 1.8e-58 229.6 161 72.0
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 6.8e-58 227.6 162 68.5
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 1.5e-57 226.5 162 71.6
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 2.0e-57 226.1 161 71.4
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 2.6e-57 225.7 164 68.9
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 3.4e-57 225.3 164 69.5
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 4.4e-57 224.9 173 67.6
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.7e-56 223.0 160 70.0
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 2.8e-56 222.2 162 66.7
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 8.3e-56 220.7 161 69.6
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 1.4e-55 219.9 161 68.3
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.8e-55 219.5 160 66.2
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 2.4e-55 219.2 160 67.5
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.2e-54 216.9 160 67.5
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 4.5e-54 214.9 159 67.3
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 5.9e-54 214.5 162 69.1
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 5.9e-54 214.5 170 64.7
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 5.9e-54 214.5 201 58.7
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 7.7e-54 214.2 162 69.1
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.3e-53 213.4 159 67.3
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.9e-53 212.2 168 64.9
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.5e-52 209.1 157 66.2
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 3.3e-52 208.8 158 64.6
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 5.5e-52 208.0 168 61.9
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 9.5e-52 207.2 169 62.1
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 9.5e-52 207.2 156 65.4
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 9.5e-52 207.2 162 64.8
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 9.5e-52 207.2 171 61.4
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 1.2e-51 206.8 170 61.8
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 2.1e-51 206.1 169 63.3
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 3.6e-51 205.3 156 64.1
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 8.0e-51 204.1 155 63.9
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.0e-50 203.8 169 60.9
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 6.8e-50 201.1 151 69.5
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 2.6e-49 199.1 159 61.0
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 2.6e-49 199.1 168 61.3
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 8.3e-48 194.1 160 63.8
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 8.3e-48 194.1 161 58.4
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 9.2e-47 190.7 194 54.6
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 7.8e-46 187.6 164 58.5
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 6.6e-45 184.5 148 56.8
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 7.3e-44 181.0 148 60.8
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 7.3e-44 181.0 155 56.1
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 9.5e-44 180.6 156 55.1
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 9.5e-44 180.6 162 54.9
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 2.8e-43 179.1 160 57.5
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 3.6e-43 178.7 153 57.5
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 4.7e-43 178.3 162 54.9
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 8.0e-43 177.6 158 58.2
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 8.0e-43 177.6 158 58.2
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.0e-42 177.2 150 59.3
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 1.0e-42 177.2 155 59.4
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 1.4e-42 176.8 153 58.2
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.4e-42 176.8 148 61.5
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.8e-42 176.4 149 59.1
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 2.3e-42 176.0 159 57.9
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 2.3e-42 176.0 159 57.9
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 4.0e-42 175.3 148 60.1
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 4.0e-42 175.3 160 56.2
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 5.2e-42 174.9 160 58.1
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.2e-41 173.7 148 58.8
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 1.5e-41 173.3 148 58.1
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 7.5e-41 171.0 130 63.8
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 1.3e-40 170.2 148 58.1
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.4e-39 166.0 160 55.6
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 3.2e-39 165.6 161 52.8
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 4.6e-38 161.8 154 56.5
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 3.9e-37 158.7 148 54.1
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.2e-35 153.7 115 67.0
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 1.8e-34 149.8 133 57.1
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 1.2e-33 147.1 114 62.3
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 3.4e-33 145.6 157 45.9
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 4.4e-33 145.2 155 46.5
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 5.8e-33 144.8 154 48.7
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 1.4e-31 140.2 138 52.9
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.4e-31 140.2 155 45.2
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 1.6e-30 136.7 152 46.7
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 2.0e-25 119.8 107 52.3
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.3e-24 117.1 112 57.1
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 7.1e-23 111.3 91 59.3
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.2e-22 110.5 95 52.6
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 4.6e-22 108.6 83 71.1
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 1.9e-20 103.2 129 40.3
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 4.3e-20 102.1 84 64.3
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 1.5e-17 93.6 88 54.5
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.7e-14 82.8 47 83.0
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 2.1e-11 73.2 54 61.1
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 8.4e-08 61.2 36 75.0


User provided reference genes

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