Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 5.0e-268 927.2 459 100.0
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 7.6e-192 674.1 465 72.3
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 1.8e-180 636.3 458 70.5
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 5.1e-180 634.8 453 69.5
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 1.3e-178 630.2 456 70.0
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 1.2e-176 623.6 456 68.6
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 4.2e-174 615.1 452 67.7
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 2.7e-173 612.5 454 68.5
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 7.9e-173 610.9 459 68.6
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 6.3e-170 601.3 455 65.7
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 1.4e-169 600.1 458 64.4
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 2.4e-169 599.4 459 66.0
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 1.9e-166 589.7 457 64.1
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 2.5e-166 589.3 455 65.9
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 7.5e-163 577.8 456 63.8
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 2.8e-162 575.9 455 60.9
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 3.7e-162 575.5 455 60.4
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.7e-159 566.6 436 65.1
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 5.0e-159 565.1 411 69.8
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 8.5e-159 564.3 459 61.4
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 7.2e-158 561.2 455 63.1
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 3.6e-157 558.9 460 64.1
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 3.0e-156 555.8 459 60.1
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 8.8e-156 554.3 452 59.3
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 3.4e-155 552.4 493 60.2
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 2.8e-154 549.3 457 60.2
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 4.8e-154 548.5 456 61.0
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 1.8e-153 546.6 454 62.1
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 1.6e-152 543.5 457 61.1
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 2.0e-152 543.1 457 61.1
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 2.7e-152 542.7 457 57.3
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 2.2e-151 539.7 457 61.1
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 1.1e-150 537.3 461 59.9
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 9.5e-150 534.3 457 59.3
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 6.1e-149 531.6 460 59.8
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 1.4e-148 530.4 457 58.6
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.2e-147 527.3 457 59.1
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 7.5e-147 524.6 451 57.9
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 9.8e-147 524.2 454 54.8
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 9.8e-147 524.2 460 57.4
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 2.8e-146 522.7 460 57.4
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 8.3e-146 521.2 465 57.2
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 8.3e-146 521.2 498 53.0
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 1.4e-145 520.4 435 60.7
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 4.1e-145 518.8 456 55.7
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 4.1e-145 518.8 460 55.2
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 5.4e-145 518.5 458 57.4
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 7.0e-145 518.1 454 55.5
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 1.2e-144 517.3 460 56.3
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 2.7e-144 516.2 465 57.4
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 2.7e-144 516.2 450 57.6
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 3.5e-144 515.8 457 54.9
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 4.5e-144 515.4 458 57.4
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 1.0e-143 514.2 459 55.8
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 1.1e-142 510.8 453 59.6
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 1.5e-142 510.4 455 54.3
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 1.9e-142 510.0 467 56.3
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 1.2e-141 507.3 454 54.0
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 8.0e-141 504.6 467 56.5
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 1.2e-139 500.7 458 59.6
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 7.5e-139 498.0 417 59.7
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.7e-138 496.9 455 54.1
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 4.9e-138 495.4 456 53.3
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 1.8e-137 493.4 455 53.8
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 2.4e-137 493.0 454 53.1
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 4.1e-137 492.3 454 53.7
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 2.7e-136 489.6 454 53.7
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 3.5e-136 489.2 381 64.6
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 7.8e-136 488.0 459 54.9
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 7.8e-136 488.0 494 54.3
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 1.3e-135 487.3 453 54.1
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 2.3e-135 486.5 446 55.6
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 3.0e-135 486.1 454 53.3
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 5.0e-135 485.3 457 53.2
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 1.9e-134 483.4 560 48.8
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 1.2e-133 480.7 461 55.3
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 2.8e-133 479.6 454 53.1
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 8.0e-133 478.0 455 53.2
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 6.4e-130 468.4 471 50.3
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 9.2e-129 464.5 436 54.4
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 3.5e-128 462.6 455 51.2
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.0e-127 461.1 467 50.1
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 7.3e-126 454.9 447 56.2
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 2.4e-121 439.9 460 50.0
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 4.1e-121 439.1 470 50.4
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 7.1e-121 438.3 460 50.4
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 1.0e-119 434.5 467 47.8
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 1.1e-118 431.0 339 64.9
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 3.2e-113 412.9 460 49.6
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.0e-111 407.9 474 47.3
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 1.5e-110 404.1 460 48.0
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 9.3e-105 384.8 461 46.0
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 2.4e-100 370.2 367 54.8
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 1.7e-98 364.0 467 44.8
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 3.1e-92 343.2 474 42.0
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 5.3e-92 342.4 388 46.1
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 2.9e-90 336.7 448 42.4
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 4.9e-90 335.9 462 42.4
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 1.0e-87 328.2 457 40.9
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 3.1e-84 316.6 477 38.2
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.0e-82 311.6 217 71.9
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 1.0e-82 311.6 356 46.1
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 1.7e-82 310.8 354 46.3
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 6.9e-76 288.9 386 41.2
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 1.4e-68 264.6 289 50.5
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 4.5e-59 233.0 332 41.9
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 5.0e-50 203.0 211 50.7
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 2.5e-41 174.1 270 40.4
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 1.4e-36 158.3 473 25.8
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 3.1e-36 157.1 440 27.0
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 9.1e-36 155.6 214 38.8
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 5.0e-34 149.8 115 65.2
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 2.2e-29 134.4 240 36.2
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 5.4e-28 129.8 112 57.1
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 9.2e-28 129.0 132 48.5
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 1.9e-25 121.3 136 49.3
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 9.5e-25 119.0 179 38.5
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 3.7e-21 107.1 314 26.8
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 4.9e-21 106.7 90 58.9
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 3.2e-20 104.0 424 24.8
SHI06229 Sapria himalayana HOM05D006101 ORTHO05D007422 3.1e-07 60.8 34 79.4
arahy.Tifrunner.gnm1.ann1.AAV4SA Arachis hypogaea HOM05D006101 ORTHO05D007422 5.2e-07 60.1 85 42.4


User provided reference genes

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