Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 0.0e+00 1809.3 936 100.0
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 0.0e+00 1146.7 1164 54.9
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1118.2 1183 54.5
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1111.7 1226 51.4
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 0.0e+00 1105.1 1210 53.1
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 0.0e+00 1102.8 1147 54.2
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 0.0e+00 1102.4 1229 53.0
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 0.0e+00 1097.8 1232 52.7
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 0.0e+00 1086.6 1217 51.6
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1084.3 1212 52.3
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 0.0e+00 1081.6 1166 52.7
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1081.2 1207 53.1
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1080.9 1212 52.1
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 2.6e-311 1072.0 1218 52.1
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 9.6e-311 1070.1 1277 50.7
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 3.7e-310 1068.1 1155 52.7
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 3.5e-308 1061.6 1231 50.8
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 7.7e-308 1060.4 1234 50.4
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 7.7e-308 1060.4 1220 52.2
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 2.9e-307 1058.5 1231 50.0
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 8.5e-307 1057.0 1264 50.7
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 1.0e-304 1050.0 1228 49.4
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 2.9e-299 1031.9 1180 50.7
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 3.3e-298 1028.5 1231 49.2
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 1.8e-293 1012.7 1229 49.4
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 1.5e-290 1003.0 1232 50.3
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 1.5e-290 1003.0 1231 50.0
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 1.6e-289 999.6 1178 49.2
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 6.2e-289 997.7 1230 49.0
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 1.2e-287 993.4 1219 49.1
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 1.5e-287 993.0 1252 47.8
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 4.4e-287 991.5 1221 50.5
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 6.4e-286 987.6 1220 50.4
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 6.4e-286 987.6 1252 47.7
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 1.1e-285 986.9 1262 47.9
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 9.2e-285 983.8 1221 48.8
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 3.0e-283 978.8 1165 49.3
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 1.5e-282 976.5 1223 47.6
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 2.5e-282 975.7 1172 49.1
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 2.5e-282 975.7 768 66.7
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 9.5e-282 973.8 1223 47.5
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 6.2e-281 971.1 1161 48.6
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 6.2e-281 971.1 1113 52.3
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 1.1e-280 970.3 1175 48.4
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 1.8e-280 969.5 1170 47.9
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 3.1e-280 968.8 1146 49.5
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 8.9e-280 967.2 1246 48.1
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 5.8e-279 964.5 1173 48.3
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 2.2e-278 962.6 1287 47.2
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 3.2e-277 958.7 1170 48.5
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 1.3e-275 953.4 1223 47.7
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 2.3e-275 952.6 1289 47.9
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 9.5e-274 947.2 1088 52.3
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 8.4e-270 934.1 1217 46.1
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 1.2e-268 930.2 1211 48.4
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 4.6e-268 928.3 1225 47.5
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 1.0e-267 927.2 1243 46.8
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 1.7e-267 926.4 711 69.8
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 1.2e-265 920.2 1217 46.3
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 4.7e-265 918.3 1207 46.6
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 1.8e-264 916.4 1173 47.6
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 2.4e-264 916.0 1168 47.7
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 5.2e-264 914.8 1184 46.9
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 2.2e-262 909.4 1171 46.8
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 2.7e-260 902.5 1182 45.7
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 1.3e-257 893.6 1172 46.7
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 1.6e-257 893.3 1217 45.4
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 8.4e-254 880.9 1242 44.8
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 3.9e-251 872.1 1004 52.1
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 8.7e-251 870.9 1158 46.8
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 2.1e-249 866.3 1132 45.1
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 2.9e-246 855.9 1171 45.1
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 2.4e-245 852.8 1119 45.8
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 3.5e-244 849.0 1112 46.8
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 1.5e-242 843.6 713 62.8
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 2.0e-239 833.2 1142 45.7
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 2.5e-234 816.2 1150 43.0
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 8.5e-230 801.2 1131 42.4
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 8.2e-225 784.6 1061 46.5
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 1.5e-223 780.4 1182 44.5
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 7.4e-218 761.5 715 58.2
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 2.4e-216 756.5 1258 40.6
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 4.8e-209 732.3 1119 41.5
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 6.7e-203 711.8 1039 43.1
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 8.3e-193 678.3 1152 38.7
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 4.9e-185 652.5 1148 37.7
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 2.1e-172 610.5 953 39.2
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.1e-165 588.2 793 45.0
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 4.2e-144 516.5 1184 32.5
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 4.0e-139 500.0 1015 35.5
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 2.1e-127 461.1 615 46.2
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 1.0e-121 442.2 757 39.6
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 1.0e-121 442.2 1162 30.6
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 2.5e-109 401.0 611 39.6
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 1.5e-88 332.0 221 72.4
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 9.4e-80 302.8 442 46.4
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 1.5e-72 278.9 233 60.5
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 1.6e-50 205.7 208 51.4
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 7.8e-50 203.4 655 29.2
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 3.3e-48 198.0 215 49.3
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 5.1e-41 174.1 180 64.4
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 4.6e-34 151.0 122 62.3
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 3.0e-33 148.3 165 55.8
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 2.8e-31 141.7 86 73.3
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 7.6e-29 133.7 96 66.7
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 1.3e-28 132.9 107 57.0
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 1.1e-27 129.8 78 74.4
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 5.4e-27 127.5 215 39.1
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 1.1e-24 119.8 77 67.5
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 1.5e-24 119.4 112 62.5
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 1.6e-18 99.4 59 78.0
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 9.3e-11 73.6 126 38.1
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 4.3e-08 64.7 74 41.9
Cre07.g347700 Chlamydomonas reinhardtii HOM05D006963 ORTHO05D141144 8.2e-07 60.5 139 28.8


User provided reference genes

Program Settings