Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 4.6e-297 1023.8 534 100.0
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 4.1e-189 665.2 514 69.6
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 1.2e-177 627.1 520 64.0
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 5.2e-176 621.7 535 62.4
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 4.6e-172 608.6 540 61.1
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 7.6e-167 591.3 512 61.5
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 2.3e-163 579.7 536 61.0
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 1.5e-162 577.0 505 61.6
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.5e-162 576.2 499 63.3
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 1.7e-158 563.5 482 64.9
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 8.4e-158 561.2 525 59.8
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 4.2e-157 558.9 536 58.6
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 3.5e-156 555.8 550 57.3
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 1.0e-155 554.3 510 60.2
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 1.1e-154 550.8 532 57.3
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 4.3e-154 548.9 544 57.4
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 2.8e-153 546.2 533 57.0
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 3.7e-153 545.8 524 58.8
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 4.8e-153 545.4 578 54.7
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 6.2e-153 545.0 545 57.8
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.8e-152 543.5 526 57.0
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 2.4e-152 543.1 518 55.2
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 5.3e-152 542.0 488 62.3
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 9.0e-152 541.2 538 57.2
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 2.0e-151 540.0 522 57.5
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 2.6e-151 539.7 520 56.7
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 3.8e-150 535.8 516 57.6
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.2e-149 532.3 544 56.6
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 2.3e-147 526.6 535 56.1
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 1.1e-146 524.2 510 57.3
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 1.5e-146 523.9 527 54.8
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 9.6e-146 521.2 518 56.0
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 1.6e-145 520.4 527 56.0
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 2.8e-145 519.6 530 55.7
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.7e-145 519.2 560 54.6
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 2.4e-144 516.5 520 56.2
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 3.1e-144 516.2 558 54.1
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 5.8e-143 511.9 526 55.5
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.0e-142 511.1 579 52.7
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.0e-142 511.1 514 56.2
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 2.2e-142 510.0 532 55.3
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 2.5e-141 506.5 547 52.8
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 3.2e-141 506.1 524 54.4
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.2e-140 504.2 515 56.7
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.8e-139 500.4 483 58.0
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.3e-139 500.0 527 52.2
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 1.1e-138 497.7 499 54.3
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 9.7e-138 494.6 522 53.8
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 6.3e-137 491.9 459 58.4
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 2.4e-136 490.0 519 52.8
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 5.3e-136 488.8 531 54.2
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 9.0e-136 488.0 510 51.6
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 1.2e-135 487.6 577 49.9
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 1.2e-135 487.6 530 54.5
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 4.5e-135 485.7 511 55.4
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 4.5e-135 485.7 523 53.5
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 7.7e-135 485.0 506 52.8
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 1.0e-134 484.6 497 55.3
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 1.3e-134 484.2 501 53.5
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 2.9e-134 483.0 534 52.2
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 8.5e-134 481.5 530 52.1
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 8.5e-134 481.5 509 54.8
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.5e-133 479.9 475 54.3
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 7.2e-133 478.4 523 52.2
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 7.9e-132 474.9 499 52.9
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 1.4e-131 474.2 547 51.4
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 8.8e-131 471.5 463 57.7
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 1.5e-130 470.7 502 52.2
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 1.5e-130 470.7 555 51.2
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 7.4e-130 468.4 504 52.0
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 9.7e-130 468.0 406 60.3
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 1.3e-129 467.6 408 62.0
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.7e-129 466.1 497 54.3
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 3.7e-129 466.1 497 54.3
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 6.3e-129 465.3 593 48.9
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 6.3e-129 465.3 501 52.5
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 4.2e-125 452.6 536 49.1
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.2e-124 451.1 501 50.7
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 1.2e-124 451.1 508 51.2
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 2.3e-123 446.8 508 51.2
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 1.1e-122 444.5 463 54.0
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 7.4e-122 441.8 529 50.3
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 1.3e-121 441.0 376 63.0
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 2.2e-121 440.3 526 49.0
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 2.2e-121 440.3 511 50.3
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 8.5e-118 428.3 500 50.8
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.1e-117 427.9 377 62.9
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 1.4e-117 427.6 529 48.4
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 4.7e-116 422.5 561 48.0
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 3.7e-105 386.3 436 50.0
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 4.5e-103 379.4 437 51.0
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 1.9e-101 374.0 506 43.9
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 7.2e-93 345.5 575 39.0
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 4.0e-91 339.7 527 41.6
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 3.4e-90 336.7 527 41.4
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 4.5e-87 326.2 362 50.6
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 8.9e-83 312.0 447 45.4
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 2.2e-73 280.8 513 38.0
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 7.8e-71 272.3 498 36.3
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.1e-67 261.9 554 35.0
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 1.5e-66 258.1 193 66.8
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 1.2e-63 248.4 379 40.6
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 4.7e-60 236.5 381 38.1
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 3.4e-58 230.3 418 37.1
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.3e-54 218.4 273 46.2
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.1e-54 216.5 172 66.9
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 6.9e-51 206.1 216 54.6
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 3.8e-49 200.3 196 56.6
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 5.6e-45 186.4 209 56.5
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.3e-41 175.3 166 60.2
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 7.9e-39 166.0 203 47.8
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 9.6e-29 132.5 205 38.0
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 4.8e-28 130.2 532 27.1
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 5.5e-24 116.7 87 71.3
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 2.8e-20 104.4 156 42.3
Haze_23483 Corylus avellana HOM05D006347 ORTHO05D007835 5.3e-19 100.1 128 46.9
Haze_23490 Corylus avellana HOM05D006347 ORTHO05D007835 1.2e-18 99.0 107 52.3
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 2.7e-15 87.8 134 40.3
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 1.7e-12 78.6 65 67.7
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 5.0e-09 67.0 158 31.6
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 8.5e-09 66.2 70 47.1
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 1.2e-07 62.4 46 63.0
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 7.9e-07 59.7 119 35.3
SEGI_25133 Sequoiadendron giganteum HOM05D006347 ORTHO05D386757 6.7e-06 56.6 186 30.6
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 8.8e-06 56.2 117 32.5


User provided reference genes

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