Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 0.0e+00 1632.8 860 100.0
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 0.0e+00 1128.2 809 73.3
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 0.0e+00 1122.1 810 70.9
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 0.0e+00 1096.6 819 72.6
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 0.0e+00 1094.3 867 67.9
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 0.0e+00 1089.7 869 67.1
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 0.0e+00 1089.7 869 67.1
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 0.0e+00 1089.3 815 67.9
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 0.0e+00 1087.4 827 71.3
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 0.0e+00 1086.2 815 71.8
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 0.0e+00 1084.3 805 71.6
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 0.0e+00 1082.8 839 68.8
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 1.2e-311 1072.8 864 67.5
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 4.1e-311 1071.2 820 69.4
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 8.8e-311 1070.1 867 66.6
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 1.2e-310 1069.7 816 66.3
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 1.3e-309 1066.2 807 68.3
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.3e-309 1066.2 819 69.7
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 4.9e-309 1064.3 820 69.5
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 2.1e-304 1048.9 792 71.0
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 4.8e-304 1047.7 817 68.2
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.0e-303 1044.6 893 65.1
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 2.9e-301 1038.5 868 66.0
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 2.9e-301 1038.5 803 66.1
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 6.0e-299 1030.8 816 67.3
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 3.7e-296 1021.5 763 71.4
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 1.7e-293 1012.7 809 67.0
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 3.2e-292 1008.4 802 65.1
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 3.2e-292 1008.4 802 65.3
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 2.1e-291 1005.7 811 64.6
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 1.1e-289 1000.0 812 64.9
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 7.4e-289 997.3 819 66.2
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 9.6e-289 996.9 807 64.1
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 6.3e-288 994.2 815 63.9
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 1.5e-286 989.6 813 64.8
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.5e-286 989.6 797 65.0
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 5.9e-286 987.6 580 81.6
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 1.8e-282 976.1 833 64.6
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 3.0e-282 975.3 786 64.8
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.1e-281 973.4 792 64.4
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 9.7e-281 970.3 827 64.4
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 8.2e-280 967.2 825 63.3
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 1.1e-279 966.8 696 72.8
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 4.1e-279 964.9 849 63.7
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 9.0e-279 963.8 817 62.1
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 3.4e-278 961.8 829 63.6
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 5.9e-278 961.1 811 64.1
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 7.7e-278 960.7 802 64.8
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 1.3e-277 959.9 812 65.0
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 1.1e-276 956.8 813 64.1
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.9e-276 956.1 682 69.6
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 5.5e-276 954.5 743 65.8
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 7.9e-275 950.7 868 61.3
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 2.0e-273 946.0 838 63.0
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 3.1e-271 938.7 745 66.7
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 9.1e-271 937.2 805 63.6
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.6e-270 935.6 957 58.3
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 4.5e-270 934.9 804 65.2
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 7.7e-270 934.1 806 59.3
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 1.7e-269 932.9 803 62.0
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 5.5e-268 927.9 814 63.0
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 3.6e-267 925.2 747 66.4
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 4.7e-267 924.9 801 63.9
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 1.5e-265 919.8 786 64.8
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 4.8e-264 914.8 806 64.3
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 1.4e-263 913.3 823 61.1
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 9.1e-263 910.6 539 76.3
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 2.0e-262 909.4 873 59.9
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 1.7e-256 889.8 832 59.5
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 4.8e-256 888.3 792 61.6
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 7.0e-255 884.4 807 57.9
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 1.2e-254 883.6 722 65.4
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 3.5e-254 882.1 798 61.9
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 1.4e-250 870.2 740 61.5
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 1.2e-249 867.1 765 60.5
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 4.5e-246 855.1 803 59.7
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 5.0e-245 851.7 787 60.9
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 6.5e-245 851.3 842 57.5
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 8.5e-245 850.9 811 58.4
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 8.5e-245 850.9 792 58.6
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 1.9e-244 849.7 892 55.5
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 3.2e-244 849.0 891 55.4
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 7.2e-244 847.8 818 59.5
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 6.1e-243 844.7 787 59.2
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 6.1e-235 818.1 683 63.8
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 1.0e-229 800.8 619 69.3
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 5.2e-226 788.5 838 54.9
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 2.4e-194 683.3 587 61.0
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.5e-180 636.7 594 63.0
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 3.5e-174 616.3 818 46.1
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 2.9e-168 596.7 493 66.5
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 4.8e-163 579.3 407 70.0
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.3e-160 571.2 343 76.4
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 1.8e-157 560.8 462 58.7
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 6.7e-157 558.9 517 54.2
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 2.1e-142 510.8 720 43.3
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 4.0e-141 506.5 407 65.8
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.2e-131 474.2 264 81.1
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 7.8e-113 412.5 346 57.2
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 6.2e-110 402.9 398 53.0
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 1.6e-105 388.3 522 51.1
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 2.2e-99 367.9 443 53.0
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 2.1e-97 361.3 356 53.7
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 2.5e-95 354.4 188 83.5
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 2.2e-91 341.3 196 81.1
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 1.4e-77 295.4 181 74.6
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 4.6e-73 280.4 327 57.2
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 7.7e-36 156.8 117 65.0
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.4e-32 146.0 83 77.1
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 5.3e-29 134.0 350 29.1
Actinidia27040 Actinidia chinensis HOM05D007000 ORTHO05D030830 2.8e-22 111.7 290 37.2
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 5.3e-21 107.5 137 41.6
Potri.004G188432 Populus trichocarpa HOM05D007000 ORTHO05D030830 2.0e-20 105.5 96 59.4
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 5.0e-19 100.9 77 62.3
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 1.0e-16 93.2 72 51.4
HPP92_011512 Vanilla planifolia HOM05D007000 ORTHO05D428354 1.3e-06 59.7 246 28.0
Oeu040143.1 Olea europaea HOM05D007000 ORTHO05D288686 3.7e-06 58.2 51 52.9


User provided reference genes

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