Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 4.8e-119 431.4 253 100.0
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.0e-25 119.4 240 49.2
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.2e-21 107.8 232 47.0
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 8.6e-20 101.7 244 37.3
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 6.2e-18 95.5 245 40.8
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 8.1e-18 95.1 184 51.6
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 1.4e-17 94.4 243 44.4
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 1.2e-16 91.3 239 34.3
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 1.5e-16 90.9 239 39.3
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 2.6e-16 90.1 254 42.9
Haze_04036 Corylus avellana HOM05D013055 ORTHO05D014149 4.9e-15 85.9 184 48.4
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 6.4e-15 85.5 251 41.0
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 1.9e-14 84.0 248 32.3
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.9e-14 84.0 240 40.8
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 3.2e-14 83.2 240 41.7
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 3.2e-14 83.2 254 40.2
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 4.1e-14 82.8 229 41.5
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 4.1e-14 82.8 252 41.3
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 5.4e-14 82.4 240 40.8
Cfa006724 Carpinus fangiana HOM05D013055 ORTHO05D014149 1.6e-13 80.9 182 47.8
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 2.1e-13 80.5 235 42.6
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 3.5e-13 79.7 251 40.2
Medtr1g086670 Medicago truncatula HOM05D012173 ORTHO05D004310 6.0e-13 79.0 233 34.3
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 1.3e-12 77.8 227 41.9
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 1.7e-12 77.4 230 40.0
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 2.3e-12 77.0 236 39.0
CDE05G3151 Ceratophyllum demersum HOM05D000081 ORTHO05D000036 3.0e-12 76.6 214 45.3
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 3.0e-12 76.6 251 39.8
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 3.0e-12 76.6 237 34.6
Rhsim11G0096900 Rhododendron simsii HOM05D013055 ORTHO05D012930 3.0e-12 76.6 187 48.7
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 6.6e-12 75.5 227 40.5
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 8.7e-12 75.1 242 41.7
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 8.7e-12 75.1 234 44.0
CiPaw.07G030700 Carya illinoinensis HOM05D013055 ORTHO05D014149 1.1e-11 74.7 185 49.7
Ciclev10002618m.g Citrus clementina HOM05D013055 ORTHO05D014149 1.1e-11 74.7 184 35.9
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 1.1e-11 74.7 238 31.5
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 1.1e-11 74.7 235 42.6
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 1.5e-11 74.3 222 41.4
Actinidia16871 Actinidia chinensis HOM05D013055 ORTHO05D012930 1.9e-11 73.9 184 47.8
Ah.11g049040 Amaranthus hybridus HOM05D009154 ORTHO05D004310 1.9e-11 73.9 245 33.5
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 1.9e-11 73.9 239 39.7
Lju926C3T5 Lonicera japonica HOM05D009154 ORTHO05D004310 2.5e-11 73.6 181 35.4
Psat6g160360 Pisum sativum HOM05D012173 ORTHO05D004310 3.3e-11 73.2 246 32.1
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 4.3e-11 72.8 237 40.5
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 4.3e-11 72.8 222 41.0
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 5.6e-11 72.4 221 41.2
AUR62024610 Chenopodium quinoa HOM05D009154 ORTHO05D004310 7.3e-11 72.0 248 29.8
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 9.6e-11 71.6 178 46.6
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 1.2e-10 71.2 240 38.8
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.2e-10 71.2 185 48.1
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.2e-10 71.2 247 40.1
Glyma.02G010700 Glycine max HOM05D012173 ORTHO05D004310 1.6e-10 70.9 237 37.1
Cc02_g35210 Coffea canephora HOM05D015885 ORTHO05D012930 2.1e-10 70.5 188 48.4
vmacro01576 Vaccinium macrocarpon HOM05D013055 ORTHO05D012930 3.6e-10 69.7 179 46.9
Eucgr.K03556 Eucalyptus grandis HOM05D009154 ORTHO05D004310 4.7e-10 69.3 220 42.7
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 8.1e-10 68.6 254 41.7
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 8.1e-10 68.6 230 40.4
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 1.1e-09 68.2 212 37.3
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 1.4e-09 67.8 225 33.3
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.4e-09 67.8 239 38.5
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 1.8e-09 67.4 251 31.9
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 3.1e-09 66.6 240 38.8
Sed0022617 Sechium edule HOM05D009154 ORTHO05D004310 5.2e-09 65.9 247 35.2
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 6.9e-09 65.5 243 34.2
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 9.0e-09 65.1 238 37.8
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 1.2e-08 64.7 231 39.0
QL03p015395 Quercus lobata HOM05D013055 ORTHO05D014149 1.2e-08 64.7 183 48.1
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 1.5e-08 64.3 232 31.0
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.5e-08 64.3 238 32.4
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 1.5e-08 64.3 232 31.5
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 1.5e-08 64.3 233 39.9
PGR044G0657 Punica granatum HOM05D009154 ORTHO05D004310 1.5e-08 64.3 219 32.9
Hund16457 Selenicereus undatus HOM05D009154 ORTHO05D004310 1.5e-08 64.3 229 31.0
EL10As5g23572 Beta vulgaris HOM05D009154 ORTHO05D004310 2.0e-08 63.9 248 38.3
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 2.0e-08 63.9 239 37.7
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.6e-08 63.5 226 38.1
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 2.6e-08 63.5 266 38.3
Atru.chr2.269 Acer truncatum HOM05D013055 ORTHO05D004310 3.4e-08 63.2 175 37.7
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 4.4e-08 62.8 253 40.7
MD12G1204500 Malus domestica HOM05D018542 ORTHO05D014149 5.8e-08 62.4 179 45.3
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 7.6e-08 62.0 240 33.3
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 9.9e-08 61.6 78 47.4
Sabra14G0087500 Salix brachista HOM05D009154 ORTHO05D004310 9.9e-08 61.6 198 34.3
CiPaw.08G154700 Carya illinoinensis HOM05D013055 ORTHO05D014149 1.3e-07 61.2 184 46.2
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 1.3e-07 61.2 78 46.2
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 2.9e-07 60.1 217 33.2
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 3.8e-07 59.7 224 33.9
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 4.9e-07 59.3 250 38.4
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 6.4e-07 58.9 234 40.6
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 6.4e-07 58.9 74 47.3
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 8.4e-07 58.5 87 43.7
CsaV3_7G030120 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.1e-06 58.2 239 35.6
Prupe.6G311200 Prunus persica HOM05D018542 ORTHO05D014149 1.4e-06 57.8 186 41.9
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.4e-06 57.8 237 38.4
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 1.9e-06 57.4 223 40.4
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 2.4e-06 57.0 241 37.8
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 3.2e-06 56.6 82 41.5
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 3.2e-06 56.6 82 41.5
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 3.2e-06 56.6 234 33.3
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 5.4e-06 55.8 83 42.2
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 5.4e-06 55.8 240 39.6
Lalb_Chr02g0146911 Lupinus albus HOM05D012173 ORTHO05D004310 5.4e-06 55.8 242 28.9
MD09G1285700 Malus domestica HOM05D018099 ORTHO05D020712 5.4e-06 55.8 226 44.2
SalBow3G0760 Salvia bowleyana HOM05D020384 ORTHO05D012930 5.4e-06 55.8 183 37.2
DCAR_025289 Daucus carota HOM05D013055 ORTHO05D012930 7.1e-06 55.5 181 43.6
Aqoxy6G01340 Aquilegia oxysepala HOM05D009814 ORTHO05D004310 9.3e-06 55.1 184 45.1
VMungo0720G2010 Vigna mungo HOM05D012173 ORTHO05D004310 9.3e-06 55.1 234 32.9


User provided reference genes

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