Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 0.0e+00 1122.8 573 100.0
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 3.2e-187 659.1 549 62.8
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 7.6e-181 637.9 554 58.5
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 5.3e-174 615.1 549 58.1
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 7.1e-171 604.7 516 59.9
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 2.7e-170 602.8 566 57.4
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 6.0e-170 601.7 563 58.4
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 1.3e-169 600.5 574 57.3
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 9.6e-168 594.3 542 58.5
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 1.3e-167 594.0 550 56.5
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 7.6e-165 584.7 599 54.6
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 2.4e-163 579.7 558 55.0
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 1.6e-162 577.0 530 57.7
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 2.7e-162 576.2 559 56.9
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 8.7e-161 571.2 545 56.9
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 1.9e-160 570.1 563 55.1
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 8.2e-159 564.7 571 52.5
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.8e-158 563.5 564 55.0
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 1.2e-157 560.8 561 54.5
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 2.0e-157 560.1 548 54.4
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 6.5e-156 555.1 572 54.0
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 8.4e-156 554.7 555 55.7
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 2.5e-155 553.1 555 55.3
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 1.2e-154 550.8 573 52.2
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 1.0e-153 547.7 536 55.2
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 1.3e-153 547.4 559 51.9
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.3e-153 546.6 564 54.3
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 8.7e-153 544.7 523 56.2
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 5.7e-152 542.0 568 53.7
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 1.3e-151 540.8 544 54.0
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 2.4e-150 536.6 551 53.2
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 4.1e-150 535.8 561 51.2
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.6e-149 533.1 560 52.5
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 1.7e-148 530.4 560 52.7
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 2.2e-148 530.0 582 52.4
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 6.5e-148 528.5 557 51.9
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 8.5e-148 528.1 560 52.5
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 2.5e-147 526.6 544 51.8
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 9.3e-147 524.6 555 51.0
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 1.2e-146 524.2 547 52.5
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 4.6e-146 522.3 571 50.6
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.0e-145 521.2 559 51.7
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 1.8e-145 520.4 559 51.5
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 2.3e-145 520.0 536 51.9
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 6.7e-145 518.5 559 51.5
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 1.9e-144 516.9 543 54.0
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 4.3e-144 515.8 554 51.4
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 9.7e-144 514.6 518 53.9
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 1.1e-142 511.1 544 51.1
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 1.1e-142 511.1 549 49.7
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 1.4e-142 510.8 549 51.0
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 2.4e-142 510.0 538 51.1
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 4.1e-142 509.2 549 49.9
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 4.1e-142 509.2 549 49.9
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 9.1e-142 508.1 533 51.4
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 1.5e-141 507.3 555 51.0
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 4.5e-141 505.8 567 50.1
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 7.7e-141 505.0 563 48.8
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 1.7e-140 503.8 553 49.9
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 8.5e-140 501.5 550 50.0
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 2.5e-139 500.0 504 54.4
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 3.2e-139 499.6 582 47.4
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 5.1e-137 492.3 502 55.2
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 6.7e-137 491.9 507 53.5
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 8.2e-135 485.0 534 48.3
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 7.7e-133 478.4 550 48.0
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 2.1e-122 443.7 545 46.6
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 2.7e-122 443.4 559 45.8
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 4.0e-121 439.5 384 60.9
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 3.1e-118 429.9 448 49.1
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 5.2e-113 412.5 556 43.0
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 8.0e-106 388.7 362 55.0
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 7.5e-104 382.1 572 39.7
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 3.7e-103 379.8 374 56.1
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 3.8e-100 369.8 524 43.5
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 5.2e-97 359.4 300 62.7
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 5.8e-96 355.9 552 38.9
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 5.8e-96 355.9 565 38.4
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.3e-95 354.8 368 53.0
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 7.0e-94 349.0 384 48.7
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 2.2e-87 327.4 373 51.2
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 8.3e-87 325.5 559 37.0
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 2.7e-85 320.5 363 49.9
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 1.2e-66 258.5 625 31.4
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 3.4e-48 197.2 168 58.9
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 1.6e-42 178.3 188 53.2
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 5.8e-40 169.9 194 45.9
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 1.8e-33 148.3 130 55.4
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 1.3e-26 125.6 122 54.1
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 3.3e-19 100.9 125 51.2
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 7.4e-11 73.2 69 49.3
CBR_g1064 Chara braunii HOM05D036030 ORTHO05D009724 5.0e-07 60.5 112 37.5
MD12G1208100 Malus domestica HOM05D007729 ORTHO05D009724 1.5e-06 58.9 49 61.2
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 4.2e-06 57.4 166 31.3


User provided reference genes

Program Settings