Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 5.4e-63 244.2 126 100.0
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 7.8e-54 213.8 123 86.2
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 2.3e-53 212.2 121 86.8
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 1.9e-52 209.1 121 86.0
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.2e-51 206.5 120 85.0
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 6.2e-51 204.1 126 79.4
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 6.2e-51 204.1 126 78.6
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 1.2e-49 199.9 124 79.8
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 5.8e-49 197.6 121 76.9
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 7.5e-49 197.2 122 82.0
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 7.5e-49 197.2 122 78.7
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 9.8e-49 196.8 124 79.0
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 9.8e-49 196.8 122 81.1
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 9.8e-49 196.8 124 75.8
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 2.9e-48 195.3 122 77.0
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 3.7e-48 194.9 125 79.2
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 4.9e-48 194.5 119 82.4
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 4.9e-48 194.5 159 66.7
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 1.9e-47 192.6 126 75.4
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 2.4e-47 192.2 122 80.3
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 2.4e-47 192.2 121 79.3
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 3.2e-47 191.8 126 76.2
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 7.0e-47 190.7 126 76.2
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 2.0e-46 189.1 123 74.8
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 2.7e-46 188.7 123 74.8
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 4.6e-46 188.0 122 76.2
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 7.8e-46 187.2 121 76.0
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 6.6e-45 184.1 125 73.6
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 6.6e-45 184.1 121 69.4
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 1.1e-44 183.3 125 72.8
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.5e-44 183.0 122 74.6
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 1.9e-44 182.6 126 73.8
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 4.3e-44 181.4 126 73.0
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 4.3e-44 181.4 126 73.0
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 1.2e-43 179.9 126 72.2
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.6e-43 179.5 123 71.5
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.1e-43 179.1 126 73.0
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.1e-43 179.1 126 73.0
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 2.1e-43 179.1 120 70.8
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 3.6e-43 178.3 121 74.4
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 1.1e-42 176.8 120 72.5
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 1.4e-42 176.4 126 69.0
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 2.3e-42 175.6 126 65.9
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 2.3e-42 175.6 126 69.8
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 4.0e-42 174.9 116 73.3
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.0e-42 174.9 123 69.9
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 6.8e-42 174.1 136 67.6
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 8.9e-42 173.7 122 70.5
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 1.5e-41 172.9 126 69.0
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 2.6e-41 172.2 120 72.5
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 2.6e-41 172.2 114 72.8
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 3.4e-41 171.8 126 64.3
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 3.4e-41 171.8 124 68.5
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 2.9e-40 168.7 227 47.1
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 3.7e-40 168.3 126 63.5
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 6.4e-40 167.5 154 59.1
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.6e-38 162.9 126 63.5
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 2.7e-38 162.2 118 65.3
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 1.7e-37 159.5 115 66.1
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 1.7e-37 159.5 124 66.1
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 3.0e-37 158.7 121 62.0
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 3.9e-37 158.3 115 65.2
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 5.1e-37 157.9 114 67.5
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 6.6e-37 157.5 115 64.3
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 6.6e-37 157.5 115 64.3
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 6.6e-37 157.5 115 64.3
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 6.6e-37 157.5 115 64.3
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 1.1e-36 156.8 114 64.9
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.5e-36 156.4 118 64.4
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 4.3e-36 154.8 118 64.4
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 7.3e-36 154.1 118 62.7
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 7.3e-36 154.1 118 66.1
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 9.5e-36 153.7 115 63.5
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 9.5e-36 153.7 122 61.5
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 1.2e-35 153.3 121 60.3
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 1.2e-35 153.3 95 77.9
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 1.6e-35 152.9 118 67.8
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 2.1e-35 152.5 118 61.9
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 2.8e-35 152.1 124 60.5
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 6.2e-35 151.0 107 72.9
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 8.1e-35 150.6 135 58.5
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 1.1e-34 150.2 115 61.7
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 1.8e-34 149.4 122 60.7
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 3.1e-34 148.7 115 61.7
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 4.0e-34 148.3 87 80.5
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 5.2e-34 147.9 114 62.3
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 5.2e-34 147.9 114 62.3
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 8.9e-34 147.1 115 61.7
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.5e-33 146.4 119 58.0
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 9.9e-33 143.7 126 56.3
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 1.3e-32 143.3 122 57.4
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 2.9e-32 142.1 88 73.9
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 1.9e-31 139.4 205 43.9
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 1.9e-31 139.4 88 70.5
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.7e-30 135.6 92 70.7
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 2.7e-30 135.6 110 58.2
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 3.5e-30 135.2 86 77.9
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.6e-30 134.8 92 70.7
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 4.6e-30 134.8 92 70.7
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 8.6e-29 130.6 108 63.9
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 4.7e-27 124.8 87 69.0
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 1.4e-26 123.2 82 72.0
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 2.6e-25 119.0 114 51.8
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 2.2e-24 115.9 90 62.2
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 4.2e-23 111.7 114 44.7
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 3.5e-22 108.6 86 64.0
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 2.8e-19 99.0 111 47.7
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 2.5e-12 75.9 78 42.3


User provided reference genes

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